RNA–Protein interactions for RNA: ENST00000557768.1

HNRNPC-233, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-233ENST00000557768 PURBQ96QR8 312 aaKnown RBP8.66□□□□□ -1.02
HNRNPC-233ENST00000557768 TMPRSS4Q9NRS4 437 aa8.66□□□□□ -1.02
HNRNPC-233ENST00000557768 PLEKHH2Q8IVE3 1493 aa8.65□□□□□ -1.02
HNRNPC-233ENST00000557768 PTPRKQ15262 1439 aa8.65□□□□□ -1.02
HNRNPC-233ENST00000557768 CCNB3Q8WWL7 1395 aa8.65□□□□□ -1.02
HNRNPC-233ENST00000557768 ZNF335Q9H4Z2 1342 aaPredicted RBP8.65□□□□□ -1.02
HNRNPC-233ENST00000557768 GIGYF1O75420 1035 aaPredicted RBP8.65□□□□□ -1.02
HNRNPC-233ENST00000557768 CBLBQ13191 982 aa8.65□□□□□ -1.02
HNRNPC-233ENST00000557768 GGT6Q6P531 493 aa8.65□□□□□ -1.02
HNRNPC-233ENST00000557768 CFDP1Q9UEE9 299 aaPredicted RBP8.65□□□□□ -1.02
HNRNPC-233ENST00000557768 KIAA1107Q9UPP5 1409 aa8.64□□□□□ -1.03
HNRNPC-233ENST00000557768 ZNF644Q9H582 1327 aaPredicted RBP8.64□□□□□ -1.03
HNRNPC-233ENST00000557768 ERVH48-1M5A8F1 160 aa8.64□□□□□ -1.03
HNRNPC-233ENST00000557768 CCDC82Q8N4S0 544 aa8.64□□□□□ -1.03
HNRNPC-233ENST00000557768 MEIOBQ8N635 442 aa8.64□□□□□ -1.03
HNRNPC-233ENST00000557768 KIFC2Q96AC6 838 aa8.64□□□□□ -1.03
HNRNPC-233ENST00000557768 DNMT1P26358 1616 aaKnown RBP8.64□□□□□ -1.03
HNRNPC-233ENST00000557768 MTUS2Q5JR59 1369 aa8.63□□□□□ -1.03
HNRNPC-233ENST00000557768 ESPNB1AK53 854 aa8.63□□□□□ -1.03
HNRNPC-233ENST00000557768 UPP2O95045 317 aa8.63□□□□□ -1.03
HNRNPC-233ENST00000557768 BMP2P12643 396 aa8.63□□□□□ -1.03
HNRNPC-233ENST00000557768 PDIA4P13667 645 aaKnown RBP8.63□□□□□ -1.03
HNRNPC-233ENST00000557768 VAC14Q08AM6 782 aa8.63□□□□□ -1.03
HNRNPC-233ENST00000557768 PLA2R1Q13018 1463 aa8.63□□□□□ -1.03
HNRNPC-233ENST00000557768 TCOF1Q13428 1488 aaKnown RBP8.63□□□□□ -1.03
HNRNPC-233ENST00000557768 CFAP65Q6ZU64 1925 aaKnown RBP8.62□□□□□ -1.03
HNRNPC-233ENST00000557768 UBAP1LF5GYI3 381 aa8.62□□□□□ -1.03
HNRNPC-233ENST00000557768 ZNF784Q8NCA9 323 aaPredicted RBP8.62□□□□□ -1.03
HNRNPC-233ENST00000557768 ZNF775Q96BV0 537 aaPredicted RBP8.62□□□□□ -1.03
HNRNPC-233ENST00000557768 EHBP1L1Q8N3D4 1523 aa8.61□□□□□ -1.03
HNRNPC-233ENST00000557768 MCCD1P59942 119 aaPredicted RBP8.61□□□□□ -1.03
HNRNPC-233ENST00000557768 SEPT12Q8IYM1 358 aa8.61□□□□□ -1.03
HNRNPC-233ENST00000557768 LINC00528Q8N1L1 170 aa8.61□□□□□ -1.03
HNRNPC-233ENST00000557768 ZNF592Q92610 1267 aa8.61□□□□□ -1.03
HNRNPC-233ENST00000557768 MBD5Q9P267 1494 aa8.61□□□□□ -1.03
HNRNPC-233ENST00000557768 NEURL4Q96JN8 1562 aa8.61□□□□□ -1.03
HNRNPC-233ENST00000557768 A2ML1A8K2U0 1454 aa8.6□□□□□ -1.03
HNRNPC-233ENST00000557768 EIF4G2P78344 907 aaKnown RBP eCLIP8.6□□□□□ -1.03
HNRNPC-233ENST00000557768 AGBL1Q96MI9 1066 aa8.6□□□□□ -1.03
HNRNPC-233ENST00000557768 TSEN34Q9BSV6 310 aaKnown RBP8.6□□□□□ -1.03
HNRNPC-233ENST00000557768 CYLDQ9NQC7 956 aa8.6□□□□□ -1.03
HNRNPC-233ENST00000557768 RAD21O60216 631 aa8.59□□□□□ -1.03
HNRNPC-233ENST00000557768 RELBQ01201 579 aa8.59□□□□□ -1.03
HNRNPC-233ENST00000557768 RNF20Q5VTR2 975 aa8.59□□□□□ -1.03
HNRNPC-233ENST00000557768 Q6ZVU0 165 aa8.59□□□□□ -1.03
HNRNPC-233ENST00000557768 RTEL1-TNFRSF6BF6WH68 1400 aa8.58□□□□□ -1.04
HNRNPC-233ENST00000557768 ZBTB7CA1YPR0 619 aa8.58□□□□□ -1.04
HNRNPC-233ENST00000557768 SOBPA7XYQ1 873 aa8.58□□□□□ -1.04
HNRNPC-233ENST00000557768 CEP126Q9P2H0 1117 aa8.58□□□□□ -1.04
HNRNPC-233ENST00000557768 KDM5DQ9BY66 1539 aa8.58□□□□□ -1.04
HNRNPC-233ENST00000557768 STRCP1A6NGW2 1772 aa8.58□□□□□ -1.04
HNRNPC-233ENST00000557768 CAMSAP2Q08AD1 1489 aa8.57□□□□□ -1.04
HNRNPC-233ENST00000557768 CEP162Q5TB80 1403 aa8.57□□□□□ -1.04
HNRNPC-233ENST00000557768 KIF3BO15066 747 aa8.57□□□□□ -1.04
HNRNPC-233ENST00000557768 LILRA1O75019 489 aa8.57□□□□□ -1.04
HNRNPC-233ENST00000557768 ADD1P35611 737 aaKnown RBP8.57□□□□□ -1.04
HNRNPC-233ENST00000557768 WASHC4Q2M389 1173 aa8.57□□□□□ -1.04
HNRNPC-233ENST00000557768 PROSER2Q86WR7 435 aaPredicted RBP8.57□□□□□ -1.04
HNRNPC-233ENST00000557768 PCDHB11Q9Y5F2 797 aa8.57□□□□□ -1.04
HNRNPC-233ENST00000557768 DHX29Q7Z478 1369 aaKnown RBP8.57□□□□□ -1.04
HNRNPC-233ENST00000557768 TNRQ92752 1358 aa8.57□□□□□ -1.04
HNRNPC-233ENST00000557768 CEP152O94986 1710 aa8.57□□□□□ -1.04
HNRNPC-233ENST00000557768 CCDC141Q6ZP82 1450 aa8.57□□□□□ -1.04
HNRNPC-233ENST00000557768 MAN1A2O60476 641 aa8.56□□□□□ -1.04
HNRNPC-233ENST00000557768 PZPP20742 1482 aa8.56□□□□□ -1.04
HNRNPC-233ENST00000557768 NCOA2Q15596 1464 aa8.56□□□□□ -1.04
HNRNPC-233ENST00000557768 SHANK2Q9UPX8 1470 aa8.56□□□□□ -1.04
HNRNPC-233ENST00000557768 MED1Q15648 1581 aaPredicted RBP8.56□□□□□ -1.04
HNRNPC-233ENST00000557768 VWDEQ8N2E2 1590 aa8.56□□□□□ -1.04
HNRNPC-233ENST00000557768 IQGAP1P46940 1657 aa8.56□□□□□ -1.04
HNRNPC-233ENST00000557768 CPS1P31327 1500 aa8.55□□□□□ -1.04
HNRNPC-233ENST00000557768 DEPDC5O75140 1603 aa8.55□□□□□ -1.04
HNRNPC-233ENST00000557768 POM121CA8CG34 1229 aa8.55□□□□□ -1.04
HNRNPC-233ENST00000557768 ADH1AP07327 375 aa8.55□□□□□ -1.04
HNRNPC-233ENST00000557768 PIP4K2BP78356 416 aa8.55□□□□□ -1.04
HNRNPC-233ENST00000557768 FNBP4Q8N3X1 1017 aaPredicted RBP8.55□□□□□ -1.04
HNRNPC-233ENST00000557768 ZNF395Q9H8N7 513 aaPredicted RBP8.55□□□□□ -1.04
HNRNPC-233ENST00000557768 ARHGEF5Q12774 1597 aa8.55□□□□□ -1.04
HNRNPC-233ENST00000557768 ZC3H13Q5T200 1668 aaKnown RBP8.55□□□□□ -1.04
HNRNPC-233ENST00000557768 WASHC2CQ9Y4E1 1318 aa8.54□□□□□ -1.04
HNRNPC-233ENST00000557768 FAM135AQ9P2D6 1515 aa8.54□□□□□ -1.04
HNRNPC-233ENST00000557768 RNF17Q9BXT8 1623 aaKnown RBP8.54□□□□□ -1.04
HNRNPC-233ENST00000557768 UGGT1Q9NYU2 1555 aa8.54□□□□□ -1.04
HNRNPC-233ENST00000557768 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.54□□□□□ -1.042e-10■□□□□ 8.9
HNRNPC-233ENST00000557768 HSPA1LP34931 641 aa8.54□□□□□ -1.04
HNRNPC-233ENST00000557768 WWC1Q8IX03 1113 aa8.54□□□□□ -1.04
HNRNPC-233ENST00000557768 TRIM52Q96A61 297 aa8.54□□□□□ -1.04
HNRNPC-233ENST00000557768 ALKQ9UM73 1620 aa8.54□□□□□ -1.04
HNRNPC-233ENST00000557768 FIGNL2A6NMB9 653 aa8.53□□□□□ -1.04
HNRNPC-233ENST00000557768 SPINT1O43278 529 aa8.53□□□□□ -1.04
HNRNPC-233ENST00000557768 SCTRP47872 440 aa8.53□□□□□ -1.04
HNRNPC-233ENST00000557768 SEMA3FQ13275 785 aa8.53□□□□□ -1.04
HNRNPC-233ENST00000557768 SLFNL1Q499Z3 407 aa8.53□□□□□ -1.04
HNRNPC-233ENST00000557768 NPM2Q86SE8 214 aaKnown RBP8.53□□□□□ -1.04
HNRNPC-233ENST00000557768 CCDC125Q86Z20 511 aa8.53□□□□□ -1.04
HNRNPC-233ENST00000557768 CCDC97Q96F63 343 aaPredicted RBP8.53□□□□□ -1.04
HNRNPC-233ENST00000557768 INSM2Q96T92 566 aaPredicted RBP8.53□□□□□ -1.04
HNRNPC-233ENST00000557768 UBR1Q8IWV7 1749 aa8.53□□□□□ -1.04
HNRNPC-233ENST00000557768 SOS2Q07890 1332 aaPredicted RBP8.53□□□□□ -1.04
HNRNPC-233ENST00000557768 XIRP1Q702N8 1843 aaKnown RBP8.52□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms