RNA–Protein interactions for RNA: snR39B

snR39B, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR39B, Length 96 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR39BsnR39B KIP1P28742 1111 aa1.86□□□□□ -2.11
snR39BsnR39B HRR25P29295 494 aaKnown RBP1.86□□□□□ -2.11
snR39BsnR39B CIC1P38779 376 aaKnown RBP1.86□□□□□ -2.11
snR39BsnR39B QDR1P40475 563 aa1.86□□□□□ -2.11
snR39BsnR39B SAM37P50110 327 aa1.86□□□□□ -2.11
snR39BsnR39B ATG1P53104 897 aa1.86□□□□□ -2.11
snR39BsnR39B PEX13P80667 386 aa1.86□□□□□ -2.11
snR39BsnR39B LGE1Q02796 332 aaKnown RBP1.86□□□□□ -2.11
snR39BsnR39B SIZ1Q04195 904 aa1.86□□□□□ -2.11
snR39BsnR39B YCS4Q06156 1176 aa1.86□□□□□ -2.11
snR39BsnR39B RCL1Q08096 367 aaPredicted RBP1.86□□□□□ -2.11
snR39BsnR39B YPL260WQ08977 551 aa1.86□□□□□ -2.11
snR39BsnR39B HMI1Q12039 706 aa1.86□□□□□ -2.11
snR39BsnR39B NDJ1Q12366 352 aa1.86□□□□□ -2.11
snR39BsnR39B PFK1P16861 987 aaKnown RBP1.85□□□□□ -2.11
snR39BsnR39B SQT1P35184 431 aa1.85□□□□□ -2.11
snR39BsnR39B RSM26P47141 266 aa1.85□□□□□ -2.11
snR39BsnR39B GTF1P53260 183 aaPredicted RBP1.85□□□□□ -2.11
snR39BsnR39B KAR5Q04746 504 aa1.85□□□□□ -2.11
snR39BsnR39B MCH5Q08777 521 aa1.85□□□□□ -2.11
snR39BsnR39B VTS1Q08831 523 aaKnown RBP RIP-Chip data1.85□□□□□ -2.11not detected
snR39BsnR39B SNF5P18480 905 aa1.84□□□□□ -2.11
snR39BsnR39B SRM1P21827 482 aa1.84□□□□□ -2.11
snR39BsnR39B APL1P27351 700 aa1.84□□□□□ -2.11
snR39BsnR39B PLB1P39105 664 aa1.84□□□□□ -2.11
snR39BsnR39B YER158CP40095 573 aa1.84□□□□□ -2.11
snR39BsnR39B SVS1Q12254 260 aa1.84□□□□□ -2.11
snR39BsnR39B PTC5Q12511 572 aa1.84□□□□□ -2.11
snR39BsnR39B HOF1Q05080 669 aa1.83□□□□□ -2.12
snR39BsnR39B ATG13Q06628 738 aa1.83□□□□□ -2.12
snR39BsnR39B OMS1Q06668 471 aa1.83□□□□□ -2.12
snR39BsnR39B IRC10Q08118 586 aa1.83□□□□□ -2.12
snR39BsnR39B AFT2Q08957 416 aa1.83□□□□□ -2.12
snR39BsnR39B ACF2Q12168 779 aa1.83□□□□□ -2.12
snR39BsnR39B SPO21Q12411 609 aa1.83□□□□□ -2.12
snR39BsnR39B GPB2P39717 880 aa1.82□□□□□ -2.12
snR39BsnR39B MET12P46151 657 aa1.82□□□□□ -2.12
snR39BsnR39B EXG2P52911 562 aa1.82□□□□□ -2.12
snR39BsnR39B NPL3Q01560 414 aaKnown RBP RIP-Chip data1.82□□□□□ -2.12not detected
snR39BsnR39B MSC2Q03455 724 aa1.82□□□□□ -2.12
snR39BsnR39B EST2Q06163 884 aa1.82□□□□□ -2.12
snR39BsnR39B ENB1Q08299 606 aa1.82□□□□□ -2.12
snR39BsnR39B HIS5P07172 385 aa1.81□□□□□ -2.12
snR39BsnR39B TAF13P11747 167 aa1.81□□□□□ -2.12
snR39BsnR39B SEC23P15303 768 aaKnown RBP1.81□□□□□ -2.12
snR39BsnR39B EFT1P32324 842 aaKnown RBP1.81□□□□□ -2.12
snR39BsnR39B RDH54P38086 958 aa1.81□□□□□ -2.12
snR39BsnR39B KTR4P38131 464 aa1.81□□□□□ -2.12
snR39BsnR39B POA1P38218 177 aa1.81□□□□□ -2.12
snR39BsnR39B PEX28P38848 579 aa1.81□□□□□ -2.12
snR39BsnR39B SIP5P40210 489 aaKnown RBP1.81□□□□□ -2.12
snR39BsnR39B TMN2Q04562 672 aa1.81□□□□□ -2.12
snR39BsnR39B RIB2Q12362 591 aaKnown RBP1.81□□□□□ -2.12
snR39BsnR39B ICT1Q12385 394 aa1.81□□□□□ -2.12
snR39BsnR39B PEP7P32609 515 aa1.8□□□□□ -2.12
snR39BsnR39B PRP40P33203 583 aaKnown RBP1.8□□□□□ -2.12
snR39BsnR39B ALG3P38179 458 aa1.8□□□□□ -2.12
snR39BsnR39B SUL1P38359 859 aa1.8□□□□□ -2.12
snR39BsnR39B MND2P40577 368 aa1.8□□□□□ -2.12
snR39BsnR39B GCV2P49095 1034 aa1.8□□□□□ -2.12
snR39BsnR39B SEC5P89102 971 aa1.8□□□□□ -2.12
snR39BsnR39B MAP1Q01662 387 aaKnown RBP RIP-Chip data1.8□□□□□ -2.12not detected
snR39BsnR39B TPO1Q07824 586 aa1.8□□□□□ -2.12
snR39BsnR39B YAP7Q08182 245 aa1.8□□□□□ -2.12
snR39BsnR39B YOL073CQ08232 322 aa1.8□□□□□ -2.12
snR39BsnR39B THS1P04801 734 aaKnown RBP1.79□□□□□ -2.12
snR39BsnR39B GCD6P32501 712 aaKnown RBP1.79□□□□□ -2.12
snR39BsnR39B AFG2P32794 780 aa1.79□□□□□ -2.12
snR39BsnR39B LEO1P38439 464 aa1.79□□□□□ -2.12
snR39BsnR39B RRT14P40470 206 aa1.79□□□□□ -2.12
snR39BsnR39B CHA4P43634 648 aa1.79□□□□□ -2.12
snR39BsnR39B YGL140CP53120 1219 aa1.79□□□□□ -2.12
snR39BsnR39B ULP1Q02724 621 aa1.79□□□□□ -2.12
snR39BsnR39B COQ11Q05892 277 aa1.79□□□□□ -2.12
snR39BsnR39B ADY3Q07732 790 aa1.79□□□□□ -2.12
snR39BsnR39B GPI13Q07830 1017 aa1.79□□□□□ -2.12
snR39BsnR39B HEM13P11353 328 aaKnown RBP1.78□□□□□ -2.12
snR39BsnR39B DAK2P43550 591 aa1.78□□□□□ -2.12
snR39BsnR39B ENT3P47160 408 aa1.78□□□□□ -2.12
snR39BsnR39B STB4P50104 949 aa1.78□□□□□ -2.12
snR39BsnR39B RPL34AP87262 121 aaPredicted RBP1.78□□□□□ -2.12
snR39BsnR39B YLR040CQ07988 224 aa1.78□□□□□ -2.12
snR39BsnR39B GUP2Q08929 609 aa1.78□□□□□ -2.12
snR39BsnR39B ACE2P21192 770 aa1.77□□□□□ -2.13
snR39BsnR39B ILV6P25605 309 aaKnown RBP1.77□□□□□ -2.13
snR39BsnR39B TMT1P32643 299 aa1.77□□□□□ -2.13
snR39BsnR39B VPS35P34110 944 aa1.77□□□□□ -2.13
snR39BsnR39B ATG19P35193 415 aa1.77□□□□□ -2.13
snR39BsnR39B RGD1P38339 666 aa1.77□□□□□ -2.13
snR39BsnR39B ZRG8P40021 1076 aa1.77□□□□□ -2.13
snR39BsnR39B ADI1Q03677 179 aa1.77□□□□□ -2.13
snR39BsnR39B OXR1Q08952 273 aa1.77□□□□□ -2.13
snR39BsnR39B YNL162W-AQ3E7A8 72 aa1.77□□□□□ -2.13
snR39BsnR39B TRL1P09880 827 aaKnown RBP1.76□□□□□ -2.13
snR39BsnR39B ENA1P13587 1091 aa1.76□□□□□ -2.13
snR39BsnR39B ERG4P25340 473 aa1.76□□□□□ -2.13
snR39BsnR39B UGA4P32837 571 aa1.76□□□□□ -2.13
snR39BsnR39B MTH1P35198 433 aa1.76□□□□□ -2.13
snR39BsnR39B SPC42P36094 363 aa1.76□□□□□ -2.13
snR39BsnR39B YFL054CP43549 646 aa1.76□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 53.9 ms