RNA–Protein interactions for RNA: YPR028W

YOP1, Transcript of Membrane protein that interacts with Yip1p to mediate membrane traffic, yeastyeast

Gene YOP1, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YOP1YPR028W SNF5P18480 905 aa3.82□□□□□ -1.8
YOP1YPR028W ATF1P40353 525 aa3.82□□□□□ -1.8
YOP1YPR028W VTS1Q08831 523 aaKnown RBP RIP-Chip data3.82□□□□□ -1.8not detected
YOP1YPR028W RSM26P47141 266 aa3.81□□□□□ -1.8
YOP1YPR028W GTF1P53260 183 aaPredicted RBP3.81□□□□□ -1.8
YOP1YPR028W EMC1P25574 760 aa3.8□□□□□ -1.8
YOP1YPR028W SAM37P50110 327 aa3.8□□□□□ -1.8
YOP1YPR028W HMI1Q12039 706 aa3.8□□□□□ -1.8
YOP1YPR028W KIN2P13186 1147 aaKnown RBP3.79□□□□□ -1.8
YOP1YPR028W RDH54P38086 958 aa3.79□□□□□ -1.8
YOP1YPR028W SUB2Q07478 446 aaKnown RBP3.79□□□□□ -1.8
YOP1YPR028W NOP12Q08208 459 aaKnown RBP3.79□□□□□ -1.8
YOP1YPR028W RIB2Q12362 591 aaKnown RBP3.79□□□□□ -1.8
YOP1YPR028W AFG2P32794 780 aa3.78□□□□□ -1.8
YOP1YPR028W SQT1P35184 431 aa3.78□□□□□ -1.8
YOP1YPR028W PEX28P38848 579 aa3.78□□□□□ -1.8
YOP1YPR028W RPN3P40016 523 aaKnown RBP3.78□□□□□ -1.8
YOP1YPR028W GCV2P49095 1034 aa3.78□□□□□ -1.8
YOP1YPR028W PTC5Q12511 572 aa3.78□□□□□ -1.8
YOP1YPR028W APL1P27351 700 aa3.77□□□□□ -1.81
YOP1YPR028W CIC1P38779 376 aaKnown RBP3.77□□□□□ -1.81
YOP1YPR028W PLB1P39105 664 aa3.77□□□□□ -1.81
YOP1YPR028W LGE1Q02796 332 aaKnown RBP3.77□□□□□ -1.81
YOP1YPR028W GPI13Q07830 1017 aa3.77□□□□□ -1.81
YOP1YPR028W AIM39Q08223 395 aa3.77□□□□□ -1.81
YOP1YPR028W SIP5P40210 489 aaKnown RBP3.76□□□□□ -1.81
YOP1YPR028W IOC3P43596 787 aa3.76□□□□□ -1.81
YOP1YPR028W EST2Q06163 884 aa3.76□□□□□ -1.81
YOP1YPR028W HRR25P29295 494 aaKnown RBP3.75□□□□□ -1.81
YOP1YPR028W UGA4P32837 571 aa3.75□□□□□ -1.81
YOP1YPR028W PRP40P33203 583 aaKnown RBP3.75□□□□□ -1.81
YOP1YPR028W MAP1Q01662 387 aaKnown RBP RIP-Chip data3.75□□□□□ -1.81not detected
YOP1YPR028W ULP1Q02724 621 aa3.75□□□□□ -1.81
YOP1YPR028W SIZ1Q04195 904 aa3.75□□□□□ -1.81
YOP1YPR028W SVS1Q12254 260 aa3.75□□□□□ -1.81
YOP1YPR028W KAR2P16474 682 aaKnown RBP3.74□□□□□ -1.81
YOP1YPR028W YGL140CP53120 1219 aa3.74□□□□□ -1.81
YOP1YPR028W YPL260WQ08977 551 aa3.74□□□□□ -1.81
YOP1YPR028W HEM13P11353 328 aaKnown RBP3.73□□□□□ -1.81
YOP1YPR028W CUE2P36075 443 aaKnown RBP3.73□□□□□ -1.81
YOP1YPR028W ALG3P38179 458 aa3.73□□□□□ -1.81
YOP1YPR028W STU2P46675 888 aa3.73□□□□□ -1.81
YOP1YPR028W TRL1P09880 827 aaKnown RBP3.72□□□□□ -1.81
YOP1YPR028W PFK1P16861 987 aaKnown RBP3.72□□□□□ -1.81
YOP1YPR028W GRS1P38088 690 aaKnown RBP3.72□□□□□ -1.81
YOP1YPR028W QRI1P43123 477 aaKnown RBP3.72□□□□□ -1.81
YOP1YPR028W YFL054CP43549 646 aa3.72□□□□□ -1.81
YOP1YPR028W DAK2P43550 591 aa3.71□□□□□ -1.82
YOP1YPR028W NPL3Q01560 414 aaKnown RBP RIP-Chip data3.71□□□□□ -1.82 RIP-Chip
YOP1YPR028W MSC2Q03455 724 aa3.71□□□□□ -1.82
YOP1YPR028W EXG2P52911 562 aa3.7□□□□□ -1.82
YOP1YPR028W DAL4Q04895 635 aa3.7□□□□□ -1.82
YOP1YPR028W FRT1Q99332 602 aa3.7□□□□□ -1.82
YOP1YPR028W TMN2Q04562 672 aa3.69□□□□□ -1.82
YOP1YPR028W DED1P06634 604 aaKnown RBP3.68□□□□□ -1.82
YOP1YPR028W SEC23P15303 768 aaKnown RBP3.68□□□□□ -1.82
YOP1YPR028W PEP7P32609 515 aa3.68□□□□□ -1.82
YOP1YPR028W MET12P46151 657 aa3.68□□□□□ -1.82
YOP1YPR028W ATG13Q06628 738 aa3.68□□□□□ -1.82
YOP1YPR028W TPO1Q07824 586 aa3.68□□□□□ -1.82
YOP1YPR028W RLF2Q12495 606 aa3.68□□□□□ -1.82
YOP1YPR028W MDJ2P42834 146 aa3.67□□□□□ -1.82
YOP1YPR028W NUT2Q06213 157 aa3.67□□□□□ -1.82
YOP1YPR028W HIS5P07172 385 aa3.66□□□□□ -1.82
YOP1YPR028W ERP5P38819 212 aa3.66□□□□□ -1.82
YOP1YPR028W MND2P40577 368 aa3.66□□□□□ -1.82
YOP1YPR028W ADI1Q03677 179 aa3.66□□□□□ -1.82
YOP1YPR028W MCH5Q08777 521 aa3.66□□□□□ -1.82
YOP1YPR028W VPS35P34110 944 aa3.65□□□□□ -1.83
YOP1YPR028W POA1P38218 177 aa3.65□□□□□ -1.83
YOP1YPR028W CHA4P43634 648 aa3.65□□□□□ -1.83
YOP1YPR028W ADY3Q07732 790 aa3.65□□□□□ -1.83
YOP1YPR028W IRC10Q08118 586 aa3.65□□□□□ -1.83
YOP1YPR028W YBL113CQ7M4S9 792 aa3.65□□□□□ -1.83
YOP1YPR028W CDC3P32457 520 aaKnown RBP3.64□□□□□ -1.83
YOP1YPR028W YOL073CQ08232 322 aa3.64□□□□□ -1.83
YOP1YPR028W YER152CP10356 443 aa3.63□□□□□ -1.83
YOP1YPR028W SSA1P10591 642 aaKnown RBP3.63□□□□□ -1.83
YOP1YPR028W EFT1P32324 842 aaKnown RBP3.63□□□□□ -1.83
YOP1YPR028W GCD6P32501 712 aaKnown RBP3.63□□□□□ -1.83
YOP1YPR028W SUL1P38359 859 aa3.63□□□□□ -1.83
YOP1YPR028W YER158CP40095 573 aa3.63□□□□□ -1.83
YOP1YPR028W STB4P50104 949 aa3.63□□□□□ -1.83
YOP1YPR028W YPL109CQ02981 657 aa3.63□□□□□ -1.83
YOP1YPR028W YLR040CQ07988 224 aa3.63□□□□□ -1.83
YOP1YPR028W NDJ1Q12366 352 aa3.63□□□□□ -1.83
YOP1YPR028W RPP2AP05319 106 aaKnown RBP3.62□□□□□ -1.83
YOP1YPR028W ACE2P21192 770 aa3.62□□□□□ -1.83
YOP1YPR028W RAT1Q02792 1006 aaKnown RBP3.62□□□□□ -1.83
YOP1YPR028W KCS1Q12494 1050 aa3.62□□□□□ -1.83
YOP1YPR028W ZRG8P40021 1076 aa3.61□□□□□ -1.83
YOP1YPR028W ENB1Q08299 606 aa3.61□□□□□ -1.83
YOP1YPR028W HAT1Q12341 374 aa3.61□□□□□ -1.83
YOP1YPR028W TAF13P11747 167 aa3.6□□□□□ -1.83
YOP1YPR028W RGD1P38339 666 aa3.6□□□□□ -1.83
YOP1YPR028W OMS1Q06668 471 aa3.6□□□□□ -1.83
YOP1YPR028W OXR1Q08952 273 aa3.6□□□□□ -1.83
YOP1YPR028W ACF2Q12168 779 aa3.6□□□□□ -1.83
YOP1YPR028W PHO4P07270 312 aaKnown RBP3.59□□□□□ -1.83
YOP1YPR028W ENA1P13587 1091 aa3.59□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 45.4 ms