RNA–Protein interactions for RNA: YOR138C

RUP1, Transcript of Protein that regulates ubiquitination of Rsp5p, yeastyeast

Gene RUP1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUP1YOR138C RPL8BP29453 256 aaKnown RBP8.15□□□□□ -1.1
RUP1YOR138C PTC4P38089 393 aa8.15□□□□□ -1.1
RUP1YOR138C SSP1P38871 571 aa8.15□□□□□ -1.1
RUP1YOR138C VTC2P43585 828 aa8.15□□□□□ -1.1
RUP1YOR138C JJJ2P46997 583 aa8.15□□□□□ -1.1
RUP1YOR138C SLK19Q08581 821 aaKnown RBP8.15□□□□□ -1.1
RUP1YOR138C NEW1Q08972 1196 aaKnown RBP8.15□□□□□ -1.1
RUP1YOR138C CDC8P00572 216 aa8.15□□□□□ -1.11
RUP1YOR138C MAK11P20484 414 aaKnown RBP8.15□□□□□ -1.11
RUP1YOR138C CKI1P20485 582 aa8.15□□□□□ -1.11
RUP1YOR138C YGR153WP48238 217 aa8.15□□□□□ -1.11
RUP1YOR138C YMR114CQ04471 368 aaKnown RBP8.15□□□□□ -1.11
RUP1YOR138C ADY4Q05955 493 aa8.15□□□□□ -1.11
RUP1YOR138C OPY2Q06810 360 aa8.15□□□□□ -1.11
RUP1YOR138C RIX7Q07844 837 aaKnown RBP8.15□□□□□ -1.11
RUP1YOR138C YPL225WQ08971 146 aaKnown RBP8.15□□□□□ -1.11
RUP1YOR138C NUR1Q12066 484 aa8.15□□□□□ -1.11
RUP1YOR138C SAS3P34218 831 aa8.14□□□□□ -1.11
RUP1YOR138C SIP3P38717 1229 aa8.14□□□□□ -1.11
RUP1YOR138C DSE4P53753 1117 aa8.14□□□□□ -1.11
RUP1YOR138C SDH5Q08230 162 aa8.14□□□□□ -1.11
RUP1YOR138C KRE2P27809 442 aa8.13□□□□□ -1.11
RUP1YOR138C XRS2P33301 854 aa8.13□□□□□ -1.11
RUP1YOR138C UGA2P38067 497 aa8.13□□□□□ -1.11
RUP1YOR138C SMC2P38989 1170 aaKnown RBP8.13□□□□□ -1.11
RUP1YOR138C NPR2P39923 615 aa8.13□□□□□ -1.11
RUP1YOR138C YJR079WP47126 109 aa8.13□□□□□ -1.11
RUP1YOR138C CWC22P53333 577 aaKnown RBP8.13□□□□□ -1.11
RUP1YOR138C IRC3Q06683 689 aa8.13□□□□□ -1.11
RUP1YOR138C JIP3O13555 125 aa8.13□□□□□ -1.11
RUP1YOR138C GFA1P14742 717 aaKnown RBP8.13□□□□□ -1.11
RUP1YOR138C CCM1P48237 864 aaPredicted RBP8.13□□□□□ -1.11
RUP1YOR138C NSG2P53898 299 aa8.13□□□□□ -1.11
RUP1YOR138C HPC2Q01448 625 aa8.13□□□□□ -1.11
RUP1YOR138C NOP6Q07623 225 aaKnown RBP8.13□□□□□ -1.11
RUP1YOR138C RMP1Q12530 201 aa8.13□□□□□ -1.11
RUP1YOR138C RPC53P25441 422 aa8.12□□□□□ -1.11
RUP1YOR138C KIC1P38692 1080 aa8.12□□□□□ -1.11
RUP1YOR138C BNI5P53890 448 aaKnown RBP8.12□□□□□ -1.11
RUP1YOR138C SNF3P10870 884 aa8.12□□□□□ -1.11
RUP1YOR138C GSM1P42950 618 aa8.12□□□□□ -1.11
RUP1YOR138C CIT3P43635 486 aa8.12□□□□□ -1.11
RUP1YOR138C TOS3P43637 560 aa8.12□□□□□ -1.11
RUP1YOR138C CSM3Q04659 317 aa8.12□□□□□ -1.11
RUP1YOR138C YLH47Q06493 454 aa8.12□□□□□ -1.11
RUP1YOR138C DSE3Q08729 430 aa8.12□□□□□ -1.11
RUP1YOR138C MIP1P15801 1254 aa8.11□□□□□ -1.11
RUP1YOR138C JNM1P36224 373 aa8.11□□□□□ -1.11
RUP1YOR138C TOM71P38825 639 aaKnown RBP8.11□□□□□ -1.11
RUP1YOR138C MAD1P40957 749 aa8.11□□□□□ -1.11
RUP1YOR138C RET3P53600 189 aa8.11□□□□□ -1.11
RUP1YOR138C VPS30Q02948 557 aa8.11□□□□□ -1.11
RUP1YOR138C URH1Q04179 340 aa8.11□□□□□ -1.11
RUP1YOR138C KEL3Q08979 651 aaPredicted RBP8.11□□□□□ -1.11
RUP1YOR138C PLP2Q12017 286 aa8.11□□□□□ -1.11
RUP1YOR138C PMD1P32634 1753 aa8.1□□□□□ -1.11
RUP1YOR138C SRP54P20424 541 aaKnown RBP8.1□□□□□ -1.11
RUP1YOR138C NIP100P33420 868 aa8.1□□□□□ -1.11
RUP1YOR138C ATG32P40458 529 aa8.1□□□□□ -1.11
RUP1YOR138C THI6P41835 540 aa8.1□□□□□ -1.11
RUP1YOR138C ASE1P50275 885 aa8.1□□□□□ -1.11
RUP1YOR138C CBK1P53894 756 aa8.1□□□□□ -1.11
RUP1YOR138C MDM1Q01846 1127 aa8.1□□□□□ -1.11
RUP1YOR138C VTC3Q02725 835 aa8.1□□□□□ -1.11
RUP1YOR138C POB3Q04636 552 aaKnown RBP8.1□□□□□ -1.11
RUP1YOR138C STE23Q06010 1027 aa8.1□□□□□ -1.11
RUP1YOR138C FIG2P25653 1609 aa8.1□□□□□ -1.11
RUP1YOR138C FOB1O13329 566 aa8.1□□□□□ -1.11
RUP1YOR138C NUC1P08466 329 aa8.1□□□□□ -1.11
RUP1YOR138C SSB1P11484 613 aaKnown RBP8.1□□□□□ -1.11
RUP1YOR138C GSY1P23337 708 aa8.1□□□□□ -1.11
RUP1YOR138C PSE1P32337 1089 aaKnown RBP8.1□□□□□ -1.11
RUP1YOR138C SMC1P32908 1225 aa8.1□□□□□ -1.11
RUP1YOR138C MCD4P36051 919 aa8.1□□□□□ -1.11
RUP1YOR138C PPS1P38148 807 aa8.1□□□□□ -1.11
RUP1YOR138C OLA1P38219 394 aaKnown RBP8.1□□□□□ -1.11
RUP1YOR138C ORC6P38826 435 aa8.1□□□□□ -1.11
RUP1YOR138C CCT3P39077 534 aaKnown RBP8.1□□□□□ -1.11
RUP1YOR138C SSB2P40150 613 aaKnown RBP8.1□□□□□ -1.11
RUP1YOR138C TRS85P46944 698 aa8.1□□□□□ -1.11
RUP1YOR138C UTP22P53254 1237 aaPredicted RBP8.1□□□□□ -1.11
RUP1YOR138C PSF3Q12146 194 aa8.1□□□□□ -1.11
RUP1YOR138C FLO1P32768 1537 aa8.1□□□□□ -1.11
RUP1YOR138C TUP1P16649 713 aa8.09□□□□□ -1.11
RUP1YOR138C DAL7P21826 554 aa8.09□□□□□ -1.11
RUP1YOR138C SET5P38890 526 aaKnown RBP8.09□□□□□ -1.11
RUP1YOR138C YIL055CP40523 627 aaKnown RBP8.09□□□□□ -1.11
RUP1YOR138C APL6P46682 809 aa8.09□□□□□ -1.11
RUP1YOR138C VTI1Q04338 217 aa8.09□□□□□ -1.11
RUP1YOR138C APL5Q08951 932 aaKnown RBP8.09□□□□□ -1.11
RUP1YOR138C RAM2P29703 316 aa8.08□□□□□ -1.12
RUP1YOR138C HXT1P32465 570 aa8.08□□□□□ -1.12
RUP1YOR138C EMP47P43555 445 aa8.08□□□□□ -1.12
RUP1YOR138C TAD1P53065 400 aa8.08□□□□□ -1.12
RUP1YOR138C FOL1P53848 824 aa8.08□□□□□ -1.12
RUP1YOR138C WRS1Q12109 432 aaKnown RBP8.08□□□□□ -1.12
RUP1YOR138C ZRT2Q12436 422 aa8.08□□□□□ -1.12
RUP1YOR138C PRE10P21242 288 aaKnown RBP RIP-Chip data8.08□□□□□ -1.12not detected
RUP1YOR138C ISY1P21374 235 aaPredicted RBP8.08□□□□□ -1.12
RUP1YOR138C LAS1P36146 502 aaPredicted RBP8.08□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms