RNA–Protein interactions for RNA: YOL146W

PSF3, Transcript of Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p), yeastyeast

Gene PSF3, Length 585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PSF3YOL146W TY1B-BLQ12490 1755 aa5.21□□□□□ -1.57
PSF3YOL146W YOR1P53049 1477 aa5.21□□□□□ -1.58
PSF3YOL146W STI1P15705 589 aaKnown RBP RIP-Chip data5.21□□□□□ -1.58not detected
PSF3YOL146W MCM2P29469 868 aa5.21□□□□□ -1.58
PSF3YOL146W UGA4P32837 571 aa5.21□□□□□ -1.58
PSF3YOL146W ARL1P38116 183 aaKnown RBP5.21□□□□□ -1.58
PSF3YOL146W NUG1P40010 520 aaKnown RBP5.21□□□□□ -1.58
PSF3YOL146W MSH4P40965 878 aaPredicted RBP5.21□□□□□ -1.58
PSF3YOL146W SLS1P42900 643 aa5.21□□□□□ -1.58
PSF3YOL146W CIT3P43635 486 aa5.21□□□□□ -1.58
PSF3YOL146W YGR045CP53229 120 aa5.21□□□□□ -1.58
PSF3YOL146W ELA1P53861 379 aaPredicted RBP5.21□□□□□ -1.58
PSF3YOL146W NOG1Q02892 647 aaKnown RBP5.21□□□□□ -1.58
PSF3YOL146W DAL4Q04895 635 aa5.21□□□□□ -1.58
PSF3YOL146W AVO1Q08236 1176 aa5.21□□□□□ -1.58
PSF3YOL146W SSF2Q12153 453 aaPredicted RBP5.21□□□□□ -1.58
PSF3YOL146W VTH1P40438 1549 aa5.2□□□□□ -1.58
PSF3YOL146W VTH2P40890 1549 aa5.2□□□□□ -1.58
PSF3YOL146W GCD1P09032 578 aaPredicted RBP5.2□□□□□ -1.58
PSF3YOL146W RPS4AP0CX35 261 aaKnown RBP5.2□□□□□ -1.58
PSF3YOL146W RPS4BP0CX36 261 aaKnown RBP5.2□□□□□ -1.58
PSF3YOL146W MNR2P35724 969 aa5.2□□□□□ -1.58
PSF3YOL146W IOC3P43596 787 aa5.2□□□□□ -1.58
PSF3YOL146W YJR008WP47085 338 aa5.2□□□□□ -1.58
PSF3YOL146W ALG12P53730 551 aa5.2□□□□□ -1.58
PSF3YOL146W POB3Q04636 552 aaKnown RBP5.2□□□□□ -1.58
PSF3YOL146W NSE3Q05541 303 aa5.2□□□□□ -1.58
PSF3YOL146W TOS4Q06266 489 aa5.2□□□□□ -1.58
PSF3YOL146W OXR1Q08952 273 aa5.2□□□□□ -1.58
PSF3YOL146W CDC53Q12018 815 aaKnown RBP5.2□□□□□ -1.58
PSF3YOL146W CIT2P08679 460 aa5.19□□□□□ -1.58
PSF3YOL146W KAR2P16474 682 aaKnown RBP5.19□□□□□ -1.58
PSF3YOL146W MSH3P25336 1018 aa5.19□□□□□ -1.58
PSF3YOL146W PET112P33893 541 aa5.19□□□□□ -1.58
PSF3YOL146W NEM1P38757 446 aa5.19□□□□□ -1.58
PSF3YOL146W CWC24P53769 259 aa5.19□□□□□ -1.58
PSF3YOL146W RCM1P53972 490 aa5.19□□□□□ -1.58
PSF3YOL146W PEX13P80667 386 aa5.19□□□□□ -1.58
PSF3YOL146W SDH1Q00711 640 aa5.19□□□□□ -1.58
PSF3YOL146W UBP3Q01477 912 aaKnown RBP RIP-Chip data5.19□□□□□ -1.58not detected
PSF3YOL146W ULP1Q02724 621 aa5.19□□□□□ -1.58
PSF3YOL146W RPN4Q03465 531 aa5.19□□□□□ -1.58
PSF3YOL146W NTE1Q04958 1679 aa5.18□□□□□ -1.58
PSF3YOL146W NUP170P38181 1502 aa5.18□□□□□ -1.58
PSF3YOL146W SNT2P53127 1403 aa5.18□□□□□ -1.58
PSF3YOL146W TSR4P25040 408 aa5.18□□□□□ -1.58
PSF3YOL146W TOM20P35180 183 aa5.18□□□□□ -1.58
PSF3YOL146W RPS26AP39938 119 aaKnown RBP5.18□□□□□ -1.58
PSF3YOL146W RPS26BP39939 119 aaKnown RBP5.18□□□□□ -1.58
PSF3YOL146W RSM26P47141 266 aa5.18□□□□□ -1.58
PSF3YOL146W ALT1P52893 592 aa5.18□□□□□ -1.58
PSF3YOL146W YGR122WP53272 402 aa5.18□□□□□ -1.58
PSF3YOL146W SUB1P54000 292 aaKnown RBP5.18□□□□□ -1.58
PSF3YOL146W EAR1Q03212 550 aa5.18□□□□□ -1.58
PSF3YOL146W YOR059CQ08448 450 aaKnown RBP5.18□□□□□ -1.58
PSF3YOL146W NFS1P25374 497 aa5.17□□□□□ -1.58
PSF3YOL146W SEA4P38164 1038 aa5.17□□□□□ -1.58
PSF3YOL146W NSI1Q12457 570 aa5.17□□□□□ -1.58
PSF3YOL146W RPO21P04050 1733 aaKnown RBP5.17□□□□□ -1.58
PSF3YOL146W SMY2P32909 740 aaKnown RBP5.16□□□□□ -1.58
PSF3YOL146W SQT1P35184 431 aa5.16□□□□□ -1.58
PSF3YOL146W NNK1P36003 928 aa5.16□□□□□ -1.58
PSF3YOL146W MTR4P47047 1073 aaKnown RBP5.16□□□□□ -1.58
PSF3YOL146W UTP5Q04177 643 aaKnown RBP5.16□□□□□ -1.58
PSF3YOL146W UBX5Q06682 500 aa5.16□□□□□ -1.58
PSF3YOL146W PBP2P38151 413 aaKnown RBP RIP-Chip data5.15□□□□□ -1.59not detected
PSF3YOL146W PEX28P38848 579 aa5.15□□□□□ -1.59
PSF3YOL146W OYE3P41816 400 aaPredicted RBP5.15□□□□□ -1.59
PSF3YOL146W ATG36P46983 293 aa5.15□□□□□ -1.59
PSF3YOL146W AVT1P47082 602 aa5.15□□□□□ -1.59
PSF3YOL146W YGL081WP53156 320 aa5.15□□□□□ -1.59
PSF3YOL146W YGR161W-CQ3E744 92 aa5.15□□□□□ -1.59
PSF3YOL146W YOR093CQ12275 1648 aa5.15□□□□□ -1.59
PSF3YOL146W MYO4P32492 1471 aa5.14□□□□□ -1.59
PSF3YOL146W SSB1P11484 613 aaKnown RBP5.14□□□□□ -1.59
PSF3YOL146W CYC8P14922 966 aa5.14□□□□□ -1.59
PSF3YOL146W VMA4P22203 233 aaKnown RBP5.14□□□□□ -1.59
PSF3YOL146W FAA3P39002 694 aa5.14□□□□□ -1.59
PSF3YOL146W YAR028WP39548 234 aa5.14□□□□□ -1.59
PSF3YOL146W SSB2P40150 613 aaKnown RBP5.14□□□□□ -1.59
PSF3YOL146W ADI1Q03677 179 aa5.14□□□□□ -1.59
PSF3YOL146W UTP14Q04500 899 aaKnown RBP5.14□□□□□ -1.59
PSF3YOL146W BDF2Q07442 638 aa5.14□□□□□ -1.59
PSF3YOL146W YVC1Q12324 675 aa5.14□□□□□ -1.59
PSF3YOL146W DOP1Q03921 1698 aa5.13□□□□□ -1.59
PSF3YOL146W HXK1P04806 485 aaKnown RBP5.13□□□□□ -1.59
PSF3YOL146W MET6P05694 767 aaKnown RBP5.13□□□□□ -1.59
PSF3YOL146W RAD2P07276 1031 aa5.13□□□□□ -1.59
PSF3YOL146W BUD6P41697 788 aa5.13□□□□□ -1.59
PSF3YOL146W XKS1P42826 600 aa5.13□□□□□ -1.59
PSF3YOL146W YNR063WP53749 607 aa5.13□□□□□ -1.59
PSF3YOL146W YPL109CQ02981 657 aa5.13□□□□□ -1.59
PSF3YOL146W RET1P22276 1149 aaKnown RBP5.12□□□□□ -1.59
PSF3YOL146W MNN1P39106 762 aa5.12□□□□□ -1.59
PSF3YOL146W YGL140CP53120 1219 aa5.12□□□□□ -1.59
PSF3YOL146W PUS7Q08647 676 aaKnown RBP5.12□□□□□ -1.59
PSF3YOL146W TRE1Q08919 783 aa5.12□□□□□ -1.59
PSF3YOL146W SNQ2P32568 1501 aaKnown RBP5.12□□□□□ -1.59
PSF3YOL146W HEM13P11353 328 aaKnown RBP5.11□□□□□ -1.59
PSF3YOL146W LRG1P35688 1017 aa5.11□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 110.8 ms