RNA–Protein interactions for RNA: YNL224C

SQS1, Transcript of Protein that stimulates the ATPase and helicase activities of Prp43p, yeastyeast

Gene SQS1, Length 2,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SQS1YNL224C APP1P53933 587 aa3.6□□□□□ -1.83
SQS1YNL224C COG6P53959 839 aa3.6□□□□□ -1.83
SQS1YNL224C ERO1Q03103 563 aa3.6□□□□□ -1.83
SQS1YNL224C CWC21Q03375 135 aaKnown RBP3.6□□□□□ -1.83
SQS1YNL224C SAS4Q04003 481 aa3.6□□□□□ -1.83
SQS1YNL224C YMR018WQ04364 514 aa3.6□□□□□ -1.83
SQS1YNL224C FUS2Q05670 677 aa3.6□□□□□ -1.83
SQS1YNL224C PPM2Q08282 695 aa3.6□□□□□ -1.83
SQS1YNL224C YGR161W-CQ3E744 92 aa3.6□□□□□ -1.83
SQS1YNL224C SPS1P08458 490 aa3.59□□□□□ -1.83
SQS1YNL224C MSH2P25847 964 aa3.59□□□□□ -1.83
SQS1YNL224C HSP104P31539 908 aaKnown RBP3.59□□□□□ -1.83
SQS1YNL224C SLA2P33338 968 aa3.59□□□□□ -1.83
SQS1YNL224C WHI3P34761 661 aaKnown RBP3.59□□□□□ -1.83
SQS1YNL224C SAP185P40856 1058 aa3.59□□□□□ -1.83
SQS1YNL224C SNZ3P43545 298 aa3.59□□□□□ -1.83
SQS1YNL224C CNN1P43618 361 aa3.59□□□□□ -1.83
SQS1YNL224C GCD14P46959 383 aaPredicted RBP3.59□□□□□ -1.83
SQS1YNL224C YJR120WP47157 116 aa3.59□□□□□ -1.83
SQS1YNL224C SDA1P53313 767 aaKnown RBP3.59□□□□□ -1.83
SQS1YNL224C SNZ2P53824 298 aa3.59□□□□□ -1.83
SQS1YNL224C NEW1Q08972 1196 aaKnown RBP3.59□□□□□ -1.83
SQS1YNL224C REC8Q12188 680 aa3.59□□□□□ -1.83
SQS1YNL224C FRT1Q99332 602 aa3.59□□□□□ -1.83
SQS1YNL224C TEF1P02994 458 aaKnown RBP3.59□□□□□ -1.84
SQS1YNL224C ATP4P05626 244 aa3.59□□□□□ -1.84
SQS1YNL224C SCP160P06105 1222 aaKnown RBP RIP-Chip data3.59□□□□□ -1.84 RIP-Chip
SQS1YNL224C STE3P06783 470 aa3.59□□□□□ -1.84
SQS1YNL224C TIF1P10081 395 aaKnown RBP3.59□□□□□ -1.84
SQS1YNL224C CKA2P19454 339 aa3.59□□□□□ -1.84
SQS1YNL224C SFL1P20134 766 aa3.59□□□□□ -1.84
SQS1YNL224C VAN1P23642 535 aa3.59□□□□□ -1.84
SQS1YNL224C MIH1P23748 554 aa3.59□□□□□ -1.84
SQS1YNL224C DPB3P27344 201 aa3.59□□□□□ -1.84
SQS1YNL224C LYP1P32487 611 aa3.59□□□□□ -1.84
SQS1YNL224C TFC4P33339 1025 aa3.59□□□□□ -1.84
SQS1YNL224C NUP120P35729 1037 aa3.59□□□□□ -1.84
SQS1YNL224C MIC60P36112 540 aa3.59□□□□□ -1.84
SQS1YNL224C KIC1P38692 1080 aa3.59□□□□□ -1.84
SQS1YNL224C SET1P38827 1080 aaKnown RBP3.59□□□□□ -1.84
SQS1YNL224C MNT3P40549 630 aa3.59□□□□□ -1.84
SQS1YNL224C RLP7P40693 322 aaKnown RBP3.59□□□□□ -1.84
SQS1YNL224C YJR107WP47145 328 aa3.59□□□□□ -1.84
SQS1YNL224C UBA2P52488 636 aa3.59□□□□□ -1.84
SQS1YNL224C SAP4P53036 818 aa3.59□□□□□ -1.84
SQS1YNL224C CAF130P53280 1122 aaPredicted RBP3.59□□□□□ -1.84
SQS1YNL224C LSB1P53281 241 aa3.59□□□□□ -1.84
SQS1YNL224C HST1P53685 503 aa3.59□□□□□ -1.84
SQS1YNL224C ADE13Q05911 482 aaKnown RBP3.59□□□□□ -1.84
SQS1YNL224C DNL4Q08387 944 aaPredicted RBP3.59□□□□□ -1.84
SQS1YNL224C BUG1Q12191 341 aa3.59□□□□□ -1.84
SQS1YNL224C SPO16P17122 198 aa3.58□□□□□ -1.84
SQS1YNL224C PUP1P25043 261 aa3.58□□□□□ -1.84
SQS1YNL224C VMA8P32610 256 aaKnown RBP3.58□□□□□ -1.84
SQS1YNL224C CSE1P33307 960 aa3.58□□□□□ -1.84
SQS1YNL224C VPS35P34110 944 aa3.58□□□□□ -1.84
SQS1YNL224C BAP2P38084 609 aa3.58□□□□□ -1.84
SQS1YNL224C ALG14P38242 237 aa3.58□□□□□ -1.84
SQS1YNL224C REI1P38344 393 aaPredicted RBP3.58□□□□□ -1.84
SQS1YNL224C YHR020WP38708 688 aaKnown RBP3.58□□□□□ -1.84
SQS1YNL224C OSH3P38713 996 aaKnown RBP3.58□□□□□ -1.84
SQS1YNL224C KAP123P40069 1113 aaKnown RBP3.58□□□□□ -1.84
SQS1YNL224C TOK1P40310 691 aa3.58□□□□□ -1.84
SQS1YNL224C HUL4P40985 892 aa3.58□□□□□ -1.84
SQS1YNL224C MMM1P41800 426 aa3.58□□□□□ -1.84
SQS1YNL224C YFL066CP43538 392 aa3.58□□□□□ -1.84
SQS1YNL224C POL32P47110 350 aa3.58□□□□□ -1.84
SQS1YNL224C MIG2P53035 382 aa3.58□□□□□ -1.84
SQS1YNL224C NCS2P53923 493 aaPredicted RBP3.58□□□□□ -1.84
SQS1YNL224C RPL34AP87262 121 aaPredicted RBP3.58□□□□□ -1.84
SQS1YNL224C NSE5Q03718 556 aa3.58□□□□□ -1.84
SQS1YNL224C ECM11Q04110 302 aa3.58□□□□□ -1.84
SQS1YNL224C PIB1Q06651 286 aa3.58□□□□□ -1.84
SQS1YNL224C MSC6Q08818 692 aaKnown RBP3.58□□□□□ -1.84
SQS1YNL224C MRN1Q08925 612 aaKnown RBP RIP-Chip data3.58□□□□□ -1.84not detected
SQS1YNL224C YRF1-4O13559 1382 aa3.58□□□□□ -1.84
SQS1YNL224C YML133CQ03099 1374 aa3.58□□□□□ -1.84
SQS1YNL224C YLL067CQ07888 1374 aa3.58□□□□□ -1.84
SQS1YNL224C YLL066CQ99208 1374 aa3.58□□□□□ -1.84
SQS1YNL224C CLB3P24870 427 aa3.58□□□□□ -1.84
SQS1YNL224C MRC1P25588 1096 aa3.58□□□□□ -1.84
SQS1YNL224C CDC48P25694 835 aaKnown RBP3.58□□□□□ -1.84
SQS1YNL224C OXP1P28273 1286 aa3.58□□□□□ -1.84
SQS1YNL224C HIR1P32479 840 aa3.58□□□□□ -1.84
SQS1YNL224C PET112P33893 541 aa3.58□□□□□ -1.84
SQS1YNL224C YKL100CP34248 587 aa3.58□□□□□ -1.84
SQS1YNL224C SKI2P35207 1287 aaKnown RBP RIP-Chip data3.58□□□□□ -1.84not detected
SQS1YNL224C YKL023WP36103 277 aaKnown RBP3.58□□□□□ -1.84
SQS1YNL224C YSW1P38280 609 aa3.58□□□□□ -1.84
SQS1YNL224C EDC3P39998 551 aaKnown RBP3.58□□□□□ -1.84
SQS1YNL224C ALD5P40047 520 aaKnown RBP3.58□□□□□ -1.84
SQS1YNL224C NDC80P40460 691 aa3.58□□□□□ -1.84
SQS1YNL224C PKP1P40530 394 aa3.58□□□□□ -1.84
SQS1YNL224C GPP1P41277 250 aaKnown RBP3.58□□□□□ -1.84
SQS1YNL224C FYV8P46949 817 aaKnown RBP3.58□□□□□ -1.84
SQS1YNL224C UBP15P50101 1230 aa3.58□□□□□ -1.84
SQS1YNL224C DIP5P53388 608 aa3.58□□□□□ -1.84
SQS1YNL224C BUL2Q03758 920 aaKnown RBP3.58□□□□□ -1.84
SQS1YNL224C MCP2Q06567 569 aa3.58□□□□□ -1.84
SQS1YNL224C YDL124WQ07551 312 aaKnown RBP3.58□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 9.8 ms