RNA–Protein interactions for RNA: YMR296C

LCB1, Transcript of Component of serine palmitoyltransferase, yeastyeast

Gene LCB1, Length 1,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB1YMR296C PCI8P40512 444 aa12.78□□□□□ -0.36
LCB1YMR296C PRY3P47033 881 aa12.78□□□□□ -0.36
LCB1YMR296C GUD1Q07729 489 aa12.78□□□□□ -0.36
LCB1YMR296C SEC20P28791 383 aa12.77□□□□□ -0.36
LCB1YMR296C YDR341CQ05506 607 aaKnown RBP12.77□□□□□ -0.36
LCB1YMR296C VIP1Q06685 1146 aaKnown RBP12.77□□□□□ -0.36
LCB1YMR296C ERP3Q12403 225 aa12.77□□□□□ -0.36
LCB1YMR296C MET6P05694 767 aaKnown RBP12.77□□□□□ -0.37
LCB1YMR296C RPL8AP17076 256 aaKnown RBP12.77□□□□□ -0.37
LCB1YMR296C STU2P46675 888 aa12.77□□□□□ -0.37
LCB1YMR296C ASE1P50275 885 aa12.77□□□□□ -0.37
LCB1YMR296C CUE3P53137 624 aaKnown RBP12.77□□□□□ -0.37
LCB1YMR296C SLD5Q03406 294 aa12.77□□□□□ -0.37
LCB1YMR296C ECM29P38737 1868 aa12.76□□□□□ -0.37
LCB1YMR296C CIT1P00890 479 aa12.76□□□□□ -0.37
LCB1YMR296C STI1P15705 589 aaKnown RBP RIP-Chip data12.76□□□□□ -0.37not detected
LCB1YMR296C BRE5P53741 515 aaKnown RBP12.76□□□□□ -0.37
LCB1YMR296C PTC5Q12511 572 aa12.76□□□□□ -0.37
LCB1YMR296C TPM2P40414 161 aa12.75□□□□□ -0.37
LCB1YMR296C LIF1P53150 421 aa12.75□□□□□ -0.37
LCB1YMR296C GDE1Q02979 1223 aa12.75□□□□□ -0.37
LCB1YMR296C YLR326WQ06170 240 aaKnown RBP12.75□□□□□ -0.37
LCB1YMR296C RKM4Q12504 494 aa12.75□□□□□ -0.37
LCB1YMR296C VPS13Q07878 3144 aa12.75□□□□□ -0.37
LCB1YMR296C UGA4P32837 571 aa12.74□□□□□ -0.37
LCB1YMR296C CTR1P49573 406 aa12.74□□□□□ -0.37
LCB1YMR296C VPS62P53285 467 aa12.74□□□□□ -0.37
LCB1YMR296C FAR11P53917 953 aa12.74□□□□□ -0.37
LCB1YMR296C TMA16Q08687 178 aa12.74□□□□□ -0.37
LCB1YMR296C SUT2Q12286 268 aa12.74□□□□□ -0.37
LCB1YMR296C YUR1P26725 428 aa12.73□□□□□ -0.37
LCB1YMR296C DBP7P36120 742 aaKnown RBP12.73□□□□□ -0.37
LCB1YMR296C PAN5P38787 379 aa12.73□□□□□ -0.37
LCB1YMR296C YGL039WP53183 348 aaKnown RBP12.73□□□□□ -0.37
LCB1YMR296C ISA1Q07821 250 aaPredicted RBP12.73□□□□□ -0.37
LCB1YMR296C YOR131CQ12486 218 aa12.73□□□□□ -0.37
LCB1YMR296C TKL1P23254 680 aaKnown RBP12.73□□□□□ -0.37
LCB1YMR296C BCS1P32839 456 aa12.73□□□□□ -0.37
LCB1YMR296C MAC1P35192 417 aa12.73□□□□□ -0.37
LCB1YMR296C EIS1Q05050 843 aaKnown RBP12.73□□□□□ -0.37
LCB1YMR296C MSC6Q08818 692 aaKnown RBP12.73□□□□□ -0.37
LCB1YMR296C YDR461C-AQ2V2P7 80 aa12.73□□□□□ -0.37
LCB1YMR296C RPL22AP05749 121 aaKnown RBP12.72□□□□□ -0.37
LCB1YMR296C CCT3P39077 534 aaKnown RBP12.72□□□□□ -0.37
LCB1YMR296C AFG3P39925 761 aa12.72□□□□□ -0.37
LCB1YMR296C SCS3P53012 380 aa12.72□□□□□ -0.37
LCB1YMR296C MMR1Q06324 491 aa12.72□□□□□ -0.37
LCB1YMR296C PWP2P25635 923 aaKnown RBP12.71□□□□□ -0.37
LCB1YMR296C SAC6P32599 642 aaKnown RBP12.71□□□□□ -0.37
LCB1YMR296C REG2P38232 338 aa12.71□□□□□ -0.37
LCB1YMR296C TFG2P41896 400 aaPredicted RBP12.71□□□□□ -0.37
LCB1YMR296C YMR321CQ04898 105 aa12.71□□□□□ -0.37
LCB1YMR296C AFT2Q08957 416 aa12.71□□□□□ -0.37
LCB1YMR296C NOP58Q12499 511 aaKnown RBP12.71□□□□□ -0.37
LCB1YMR296C MCM3P24279 971 aaKnown RBP12.7□□□□□ -0.38
LCB1YMR296C ASF1P32447 279 aa12.7□□□□□ -0.38
LCB1YMR296C AIM21P40563 679 aa12.7□□□□□ -0.38
LCB1YMR296C YJR107WP47145 328 aa12.7□□□□□ -0.38
LCB1YMR296C PTA1Q01329 785 aaPredicted RBP12.7□□□□□ -0.38
LCB1YMR296C GIS4Q04233 774 aa12.7□□□□□ -0.38
LCB1YMR296C MAK11P20484 414 aaKnown RBP12.7□□□□□ -0.38
LCB1YMR296C DBP1P24784 617 aaKnown RBP12.7□□□□□ -0.38
LCB1YMR296C TFC4P33339 1025 aa12.7□□□□□ -0.38
LCB1YMR296C LDH1P38139 375 aa12.7□□□□□ -0.38
LCB1YMR296C YGL138CP53122 345 aa12.7□□□□□ -0.38
LCB1YMR296C OXR1Q08952 273 aa12.7□□□□□ -0.38
LCB1YMR296C MDM20Q12387 796 aaKnown RBP12.7□□□□□ -0.38
LCB1YMR296C NBL1Q3E7Y6 73 aa12.7□□□□□ -0.38
LCB1YMR296C TY1B-AO13527 1196 aaKnown RBP12.69□□□□□ -0.38
LCB1YMR296C BMH1P29311 267 aaKnown RBP12.69□□□□□ -0.38
LCB1YMR296C SUL1P38359 859 aa12.69□□□□□ -0.38
LCB1YMR296C STR2P47164 639 aa12.69□□□□□ -0.38
LCB1YMR296C NAF1P53919 492 aaKnown RBP12.69□□□□□ -0.38
LCB1YMR296C HOS3Q02959 697 aaKnown RBP12.69□□□□□ -0.38
LCB1YMR296C SEC8P32855 1065 aa12.68□□□□□ -0.38
LCB1YMR296C CEX1Q12453 761 aa12.68□□□□□ -0.38
LCB1YMR296C TRM11Q12463 433 aa12.68□□□□□ -0.38
LCB1YMR296C CDC15P27636 974 aa12.67□□□□□ -0.38
LCB1YMR296C KSP1P38691 1029 aaKnown RBP12.67□□□□□ -0.38
LCB1YMR296C SMD2Q06217 110 aaKnown RBP12.67□□□□□ -0.38
LCB1YMR296C APL4Q12028 832 aa12.67□□□□□ -0.38
LCB1YMR296C ARP6Q12509 438 aa12.67□□□□□ -0.38
LCB1YMR296C ADE17P38009 592 aaKnown RBP12.67□□□□□ -0.38
LCB1YMR296C VPS53P47061 822 aa12.67□□□□□ -0.38
LCB1YMR296C VPS75P53853 264 aa12.67□□□□□ -0.38
LCB1YMR296C YOR296WQ08748 1289 aa12.67□□□□□ -0.38
LCB1YMR296C HIS4P00815 799 aaKnown RBP12.66□□□□□ -0.38
LCB1YMR296C POX1P13711 748 aa12.66□□□□□ -0.38
LCB1YMR296C ALG1P16661 449 aa12.66□□□□□ -0.38
LCB1YMR296C UIP5P36137 443 aa12.66□□□□□ -0.38
LCB1YMR296C GFD1Q04839 188 aaKnown RBP12.66□□□□□ -0.38
LCB1YMR296C HCR1Q05775 265 aaKnown RBP12.66□□□□□ -0.38
LCB1YMR296C WHI4Q07655 649 aaKnown RBP12.66□□□□□ -0.38
LCB1YMR296C PSR2Q07949 397 aa12.66□□□□□ -0.38
LCB1YMR296C MAM3Q12296 706 aa12.66□□□□□ -0.38
LCB1YMR296C PDC1P06169 563 aaKnown RBP12.65□□□□□ -0.38
LCB1YMR296C SKP2P42843 763 aa12.65□□□□□ -0.38
LCB1YMR296C OSW7P43611 510 aa12.65□□□□□ -0.38
LCB1YMR296C LEO1P38439 464 aa12.64□□□□□ -0.39
LCB1YMR296C JSN1P47135 1091 aaKnown RBP RIP-Chip data12.64□□□□□ -0.39not detected
Retrieved 100 of 5,963 RNA–protein pairs in 38.6 ms