RNA–Protein interactions for RNA: YML092C

PRE8, Transcript of Alpha 2 subunit of the 20S proteasome, yeastyeast

Gene PRE8, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE8YML092C LEU2P04173 364 aaPredicted RBP3.95□□□□□ -1.78
PRE8YML092C GCD6P32501 712 aaKnown RBP3.95□□□□□ -1.78
PRE8YML092C GPT2P36148 743 aa3.95□□□□□ -1.78
PRE8YML092C YKR073CP36153 106 aa3.95□□□□□ -1.78
PRE8YML092C TOS1P38288 455 aa3.95□□□□□ -1.78
PRE8YML092C REI1P38344 393 aaPredicted RBP3.95□□□□□ -1.78
PRE8YML092C RVS167P39743 482 aaKnown RBP3.95□□□□□ -1.78
PRE8YML092C GCV1P48015 400 aa3.95□□□□□ -1.78
PRE8YML092C UTP22P53254 1237 aaPredicted RBP3.95□□□□□ -1.78
PRE8YML092C YAF9P53930 226 aa3.95□□□□□ -1.78
PRE8YML092C YCS4Q06156 1176 aa3.95□□□□□ -1.78
PRE8YML092C YIG1Q08956 461 aa3.95□□□□□ -1.78
PRE8YML092C SPE2P21182 396 aa3.94□□□□□ -1.78
PRE8YML092C YKL077WP36081 392 aa3.94□□□□□ -1.78
PRE8YML092C MTR4P47047 1073 aaKnown RBP3.94□□□□□ -1.78
PRE8YML092C ADE16P54113 591 aaKnown RBP3.94□□□□□ -1.78
PRE8YML092C KIN4Q01919 800 aa3.94□□□□□ -1.78
PRE8YML092C MSC6Q08818 692 aaKnown RBP3.94□□□□□ -1.78
PRE8YML092C MSB1P21339 1137 aaKnown RBP3.93□□□□□ -1.78
PRE8YML092C SEC20P28791 383 aa3.93□□□□□ -1.78
PRE8YML092C WHI3P34761 661 aaKnown RBP3.93□□□□□ -1.78
PRE8YML092C ATG14P38270 344 aa3.93□□□□□ -1.78
PRE8YML092C SHU2P38957 223 aa3.93□□□□□ -1.78
PRE8YML092C SAP155P43612 1002 aa3.93□□□□□ -1.78
PRE8YML092C SPO74P45819 413 aa3.93□□□□□ -1.78
PRE8YML092C SQS1P53866 767 aaKnown RBP3.93□□□□□ -1.78
PRE8YML092C MEC3Q02574 474 aa3.93□□□□□ -1.78
PRE8YML092C DAL4Q04895 635 aa3.93□□□□□ -1.78
PRE8YML092C AVO1Q08236 1176 aa3.93□□□□□ -1.78
PRE8YML092C OXR1Q08952 273 aa3.93□□□□□ -1.78
PRE8YML092C NSI1Q12457 570 aa3.93□□□□□ -1.78
PRE8YML092C CTT1P06115 562 aa3.92□□□□□ -1.78
PRE8YML092C SLD2P34252 453 aa3.92□□□□□ -1.78
PRE8YML092C SQT1P35184 431 aa3.92□□□□□ -1.78
PRE8YML092C PPX1P38698 397 aa3.92□□□□□ -1.78
PRE8YML092C MMM1P41800 426 aa3.92□□□□□ -1.78
PRE8YML092C RSM26P47141 266 aa3.92□□□□□ -1.78
PRE8YML092C INP52P50942 1183 aa3.92□□□□□ -1.78
PRE8YML092C PEX13P80667 386 aa3.92□□□□□ -1.78
PRE8YML092C WHI5Q12416 295 aa3.92□□□□□ -1.78
PRE8YML092C RPO41P13433 1351 aaKnown RBP3.91□□□□□ -1.78
PRE8YML092C TY4B-HP0C2J7 1802 aa3.91□□□□□ -1.78
PRE8YML092C TY4B-JP47024 1803 aa3.91□□□□□ -1.78
PRE8YML092C PHO4P07270 312 aaKnown RBP3.91□□□□□ -1.78
PRE8YML092C KAR2P16474 682 aaKnown RBP3.91□□□□□ -1.78
PRE8YML092C VPS35P34110 944 aa3.91□□□□□ -1.78
PRE8YML092C CHZ1P40019 153 aaPredicted RBP3.91□□□□□ -1.78
PRE8YML092C DAK2P43550 591 aa3.91□□□□□ -1.78
PRE8YML092C ELA1P53861 379 aaPredicted RBP3.91□□□□□ -1.78
PRE8YML092C YLR419WQ06698 1435 aaKnown RBP3.91□□□□□ -1.78
PRE8YML092C BUG1Q12191 341 aa3.91□□□□□ -1.78
PRE8YML092C MHP1P43638 1398 aa3.9□□□□□ -1.78
PRE8YML092C TY1A-LR4P0C2I8 440 aaKnown RBP3.9□□□□□ -1.79
PRE8YML092C TY1A-DR6P0CX70 440 aa3.9□□□□□ -1.79
PRE8YML092C TY1A-ER1P0CX71 440 aa3.9□□□□□ -1.79
PRE8YML092C TY1A-LR2P0CX72 440 aa3.9□□□□□ -1.79
PRE8YML092C TY1A-PLP0CX73 440 aa3.9□□□□□ -1.79
PRE8YML092C TY1A-JR1P0CX74 440 aa3.9□□□□□ -1.79
PRE8YML092C TY1A-LR3P0CX75 440 aa3.9□□□□□ -1.79
PRE8YML092C TY1A-ML2P0CX76 440 aa3.9□□□□□ -1.79
PRE8YML092C RAD4P14736 754 aa3.9□□□□□ -1.79
PRE8YML092C MET4P32389 672 aa3.9□□□□□ -1.79
PRE8YML092C UGA4P32837 571 aa3.9□□□□□ -1.79
PRE8YML092C RPT1P33299 467 aaKnown RBP3.9□□□□□ -1.79
PRE8YML092C ERT1P38140 529 aa3.9□□□□□ -1.79
PRE8YML092C CIT3P43635 486 aa3.9□□□□□ -1.79
PRE8YML092C SDH1Q00711 640 aa3.9□□□□□ -1.79
PRE8YML092C RIX7Q07844 837 aaKnown RBP3.9□□□□□ -1.79
PRE8YML092C TY1A-GR1Q12085 440 aa3.9□□□□□ -1.79
PRE8YML092C TY1A-PR3Q6Q5H1 440 aaKnown RBP3.9□□□□□ -1.79
PRE8YML092C TY1A-OLQ92392 440 aaKnown RBP3.9□□□□□ -1.79
PRE8YML092C YRF1-3P0CX14 1859 aa3.9□□□□□ -1.79
PRE8YML092C YRF1-7P0CX15 1859 aa3.9□□□□□ -1.79
PRE8YML092C YRF1-6P53819 1859 aa3.9□□□□□ -1.79
PRE8YML092C YML133CQ03099 1374 aa3.89□□□□□ -1.79
PRE8YML092C YLL067CQ07888 1374 aa3.89□□□□□ -1.79
PRE8YML092C YLL066CQ99208 1374 aa3.89□□□□□ -1.79
PRE8YML092C FKS3Q04952 1785 aa3.89□□□□□ -1.79
PRE8YML092C RPS4AP0CX35 261 aaKnown RBP3.89□□□□□ -1.79
PRE8YML092C RPS4BP0CX36 261 aaKnown RBP3.89□□□□□ -1.79
PRE8YML092C PUB1P32588 453 aaKnown RBP RIP-Chip data3.89□□□□□ -1.79not detected
PRE8YML092C YKL222CP35995 705 aa3.89□□□□□ -1.79
PRE8YML092C EXO5P38289 585 aa3.89□□□□□ -1.79
PRE8YML092C SLS1P42900 643 aa3.89□□□□□ -1.79
PRE8YML092C YNR063WP53749 607 aa3.89□□□□□ -1.79
PRE8YML092C BRE4Q07660 1125 aa3.89□□□□□ -1.79
PRE8YML092C SIR4P11978 1358 aa3.89□□□□□ -1.79
PRE8YML092C MSH3P25336 1018 aa3.88□□□□□ -1.79
PRE8YML092C NFS1P25374 497 aa3.88□□□□□ -1.79
PRE8YML092C MSH4P40965 878 aaPredicted RBP3.88□□□□□ -1.79
PRE8YML092C YGR045CP53229 120 aa3.88□□□□□ -1.79
PRE8YML092C ULP1Q02724 621 aa3.88□□□□□ -1.79
PRE8YML092C SNF2P22082 1703 aa3.87□□□□□ -1.79
PRE8YML092C GCD1P09032 578 aaPredicted RBP3.87□□□□□ -1.79
PRE8YML092C OSM1P21375 501 aaKnown RBP3.87□□□□□ -1.79
PRE8YML092C ARL1P38116 183 aaKnown RBP3.87□□□□□ -1.79
PRE8YML092C DUS1P53759 423 aaKnown RBP3.87□□□□□ -1.79
PRE8YML092C MAG2Q06436 670 aaKnown RBP3.87□□□□□ -1.79
PRE8YML092C ATG13Q06628 738 aa3.87□□□□□ -1.79
PRE8YML092C YOR059CQ08448 450 aaKnown RBP3.87□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms