RNA–Protein interactions for RNA: YLR240W

VPS34, Transcript of Phosphatidylinositol (PI) 3-kinase that synthesizes PI-3-phosphate, yeastyeast

Gene VPS34, Length 2,628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS34YLR240W OMA1P36163 345 aa2.86□□□□□ -1.95
VPS34YLR240W YHL012WP38709 493 aa2.86□□□□□ -1.95
VPS34YLR240W PEX7P39108 375 aa2.86□□□□□ -1.95
VPS34YLR240W MPH1P40562 993 aa2.86□□□□□ -1.95
VPS34YLR240W FAA4P47912 694 aaKnown RBP2.86□□□□□ -1.95
VPS34YLR240W NOP7P53261 605 aaKnown RBP2.86□□□□□ -1.95
VPS34YLR240W NAB6Q03735 1134 aaKnown RBP RIP-Chip data2.86□□□□□ -1.95not detected
VPS34YLR240W TIF35Q04067 274 aaKnown RBP2.86□□□□□ -1.95
VPS34YLR240W AOS1Q06624 347 aa2.86□□□□□ -1.95
VPS34YLR240W TRE1Q08919 783 aa2.86□□□□□ -1.95
VPS34YLR240W GLT1Q12680 2145 aaKnown RBP2.86□□□□□ -1.95
VPS34YLR240W ATG2P53855 1592 aa2.86□□□□□ -1.95
VPS34YLR240W RPN3P40016 523 aaKnown RBP2.86□□□□□ -1.95
VPS34YLR240W CTH1P47976 325 aa2.86□□□□□ -1.95
VPS34YLR240W HNT2P49775 206 aa2.86□□□□□ -1.95
VPS34YLR240W BRE4Q07660 1125 aa2.86□□□□□ -1.95
VPS34YLR240W SPO21Q12411 609 aa2.86□□□□□ -1.95
VPS34YLR240W SKI3P17883 1432 aaKnown RBP2.86□□□□□ -1.95
VPS34YLR240W TAF2P23255 1407 aa2.86□□□□□ -1.95
VPS34YLR240W SRO9P25567 434 aaKnown RBP2.85□□□□□ -1.95
VPS34YLR240W YSC84P32793 468 aa2.85□□□□□ -1.95
VPS34YLR240W MAC1P35192 417 aa2.85□□□□□ -1.95
VPS34YLR240W SEA4P38164 1038 aa2.85□□□□□ -1.95
VPS34YLR240W GPB2P39717 880 aa2.85□□□□□ -1.95
VPS34YLR240W TYW3P53177 273 aa2.85□□□□□ -1.95
VPS34YLR240W SDH1Q00711 640 aa2.85□□□□□ -1.95
VPS34YLR240W GDE1Q02979 1223 aa2.85□□□□□ -1.95
VPS34YLR240W YPK9Q12697 1472 aa2.85□□□□□ -1.95
VPS34YLR240W LIP5P32875 414 aa2.85□□□□□ -1.95
VPS34YLR240W MDL2P33311 773 aa2.85□□□□□ -1.95
VPS34YLR240W BAP2P38084 609 aa2.85□□□□□ -1.95
VPS34YLR240W COQ4O13525 335 aa2.84□□□□□ -1.95
VPS34YLR240W MLS1P30952 554 aa2.84□□□□□ -1.95
VPS34YLR240W SPO20Q04359 397 aa2.84□□□□□ -1.95
VPS34YLR240W GNT1Q12096 491 aa2.84□□□□□ -1.95
VPS34YLR240W ADP1P25371 1049 aa2.84□□□□□ -1.96
VPS34YLR240W PRO1P32264 428 aa2.84□□□□□ -1.96
VPS34YLR240W MCM7P38132 845 aa2.84□□□□□ -1.96
VPS34YLR240W CCZ1P38273 704 aa2.84□□□□□ -1.96
VPS34YLR240W TNA1P53322 534 aa2.84□□□□□ -1.96
VPS34YLR240W ALD6P54115 500 aaKnown RBP2.84□□□□□ -1.96
VPS34YLR240W ORC3P54790 616 aa2.84□□□□□ -1.96
VPS34YLR240W HOS3Q02959 697 aaKnown RBP2.84□□□□□ -1.96
VPS34YLR240W SSY1Q03770 852 aa2.84□□□□□ -1.96
VPS34YLR240W RKM4Q12504 494 aa2.84□□□□□ -1.96
VPS34YLR240W YER152CP10356 443 aa2.83□□□□□ -1.96
VPS34YLR240W INO1P11986 533 aa2.83□□□□□ -1.96
VPS34YLR240W SNF5P18480 905 aa2.83□□□□□ -1.96
VPS34YLR240W PTC7P38797 343 aa2.83□□□□□ -1.96
VPS34YLR240W CWC24P53769 259 aa2.83□□□□□ -1.96
VPS34YLR240W YPL066WQ12194 479 aa2.83□□□□□ -1.96
VPS34YLR240W POL1P13382 1468 aa2.83□□□□□ -1.96
VPS34YLR240W PUF4P25339 888 aaKnown RBP RIP-Chip data2.83□□□□□ -1.96not detected
VPS34YLR240W YKL107WP34251 309 aa2.83□□□□□ -1.96
VPS34YLR240W VAC8P39968 578 aa2.83□□□□□ -1.96
VPS34YLR240W RCL1Q08096 367 aaPredicted RBP2.83□□□□□ -1.96
VPS34YLR240W NBA1Q08229 501 aaKnown RBP2.83□□□□□ -1.96
VPS34YLR240W LPX1Q12405 387 aaKnown RBP2.83□□□□□ -1.96
VPS34YLR240W PEP1P32319 1579 aa2.82□□□□□ -1.96
VPS34YLR240W HSP78P33416 811 aa2.82□□□□□ -1.96
VPS34YLR240W MOT2P34909 587 aaKnown RBP2.82□□□□□ -1.96
VPS34YLR240W PIK1P39104 1066 aa2.82□□□□□ -1.96
VPS34YLR240W GTS1P40956 396 aa2.82□□□□□ -1.96
VPS34YLR240W KRI1P42846 591 aaKnown RBP2.82□□□□□ -1.96
VPS34YLR240W RSC58Q07979 502 aa2.82□□□□□ -1.96
VPS34YLR240W FAL1Q12099 399 aaKnown RBP2.82□□□□□ -1.96
VPS34YLR240W AGP1P25376 633 aa2.82□□□□□ -1.96
VPS34YLR240W SNF7P39929 240 aaKnown RBP2.82□□□□□ -1.96
VPS34YLR240W ESC2Q06340 456 aa2.82□□□□□ -1.96
VPS34YLR240W OPI10Q08202 246 aa2.82□□□□□ -1.96
VPS34YLR240W SSF2Q12153 453 aaPredicted RBP2.82□□□□□ -1.96
VPS34YLR240W MDS3P53094 1487 aa2.81□□□□□ -1.96
VPS34YLR240W SBA1P28707 216 aaKnown RBP2.81□□□□□ -1.96
VPS34YLR240W YKL069WP36088 180 aa2.81□□□□□ -1.96
VPS34YLR240W NRD1P53617 575 aaKnown RBP RIP-Chip data2.81□□□□□ -1.96 RIP-Chip
VPS34YLR240W YLR225CQ05948 407 aaKnown RBP2.81□□□□□ -1.96
VPS34YLR240W RPL11AP0C0W9 174 aaKnown RBP2.81□□□□□ -1.96
VPS34YLR240W BAS1P22035 811 aa2.81□□□□□ -1.96
VPS34YLR240W ABD1P32783 436 aaPredicted RBP2.81□□□□□ -1.96
VPS34YLR240W AIM26P32858 118 aa2.81□□□□□ -1.96
VPS34YLR240W PNT1P38969 423 aa2.81□□□□□ -1.96
VPS34YLR240W SIP5P40210 489 aaKnown RBP2.81□□□□□ -1.96
VPS34YLR240W YFL054CP43549 646 aa2.81□□□□□ -1.96
VPS34YLR240W YGL176CP46945 554 aa2.81□□□□□ -1.96
VPS34YLR240W RPL11BQ3E757 174 aaPredicted RBP2.81□□□□□ -1.96
VPS34YLR240W STU1P38198 1513 aa2.81□□□□□ -1.96
VPS34YLR240W YTA7P40340 1379 aa2.81□□□□□ -1.96
VPS34YLR240W MYO4P32492 1471 aa2.8□□□□□ -1.96
VPS34YLR240W PIN4P34217 668 aaKnown RBP RIP-Chip data2.8□□□□□ -1.96not detected
VPS34YLR240W UBP3Q01477 912 aaKnown RBP RIP-Chip data2.8□□□□□ -1.96not detected
VPS34YLR240W SHE9Q04172 456 aa2.8□□□□□ -1.96
VPS34YLR240W ACM1Q08981 209 aa2.8□□□□□ -1.96
VPS34YLR240W DFG16Q99234 619 aa2.8□□□□□ -1.96
VPS34YLR240W PRI2P20457 528 aa2.8□□□□□ -1.96
VPS34YLR240W SPP382Q06411 708 aaPredicted RBP2.8□□□□□ -1.96
VPS34YLR240W RPO31P04051 1460 aa2.8□□□□□ -1.96
VPS34YLR240W SPS1P08458 490 aa2.79□□□□□ -1.96
VPS34YLR240W DBP2P24783 546 aaKnown RBP2.79□□□□□ -1.96
VPS34YLR240W SLA2P33338 968 aa2.79□□□□□ -1.96
VPS34YLR240W POL12P38121 705 aaPredicted RBP2.79□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms