RNA–Protein interactions for RNA: YLR022C

SDO1, Transcript of Guanine nucleotide exchange factor (GEF) for Ria1p, yeastyeast

Gene SDO1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDO1YLR022C YCS4Q06156 1176 aa4.84□□□□□ -1.63
SDO1YLR022C BUD21Q08492 214 aaPredicted RBP4.84□□□□□ -1.63
SDO1YLR022C WHI5Q12416 295 aa4.84□□□□□ -1.63
SDO1YLR022C TY1A-LR4P0C2I8 440 aaKnown RBP4.83□□□□□ -1.64
SDO1YLR022C TY1A-DR6P0CX70 440 aa4.83□□□□□ -1.64
SDO1YLR022C TY1A-ER1P0CX71 440 aa4.83□□□□□ -1.64
SDO1YLR022C TY1A-LR2P0CX72 440 aa4.83□□□□□ -1.64
SDO1YLR022C TY1A-PLP0CX73 440 aa4.83□□□□□ -1.64
SDO1YLR022C TY1A-JR1P0CX74 440 aa4.83□□□□□ -1.64
SDO1YLR022C TY1A-LR3P0CX75 440 aa4.83□□□□□ -1.64
SDO1YLR022C TY1A-ML2P0CX76 440 aa4.83□□□□□ -1.64
SDO1YLR022C GAS1P22146 559 aaKnown RBP4.83□□□□□ -1.64
SDO1YLR022C MCM5P29496 775 aaKnown RBP4.83□□□□□ -1.64
SDO1YLR022C ARL1P38116 183 aaKnown RBP4.83□□□□□ -1.64
SDO1YLR022C NPR2P39923 615 aa4.83□□□□□ -1.64
SDO1YLR022C MON1P53129 644 aa4.83□□□□□ -1.64
SDO1YLR022C RCM1P53972 490 aa4.83□□□□□ -1.64
SDO1YLR022C SEN54Q02825 467 aaPredicted RBP4.83□□□□□ -1.64
SDO1YLR022C ALG6Q12001 544 aaKnown RBP4.83□□□□□ -1.64
SDO1YLR022C TY1A-GR1Q12085 440 aa4.83□□□□□ -1.64
SDO1YLR022C TY1A-PR3Q6Q5H1 440 aaKnown RBP4.83□□□□□ -1.64
SDO1YLR022C TY1A-OLQ92392 440 aaKnown RBP4.83□□□□□ -1.64
SDO1YLR022C SRB8P25648 1427 aa4.82□□□□□ -1.64
SDO1YLR022C PRP45P28004 379 aaPredicted RBP4.82□□□□□ -1.64
SDO1YLR022C SEC20P28791 383 aa4.82□□□□□ -1.64
SDO1YLR022C EXO5P38289 585 aa4.82□□□□□ -1.64
SDO1YLR022C DOT5P40553 215 aa4.82□□□□□ -1.64
SDO1YLR022C NOG1Q02892 647 aaKnown RBP4.82□□□□□ -1.64
SDO1YLR022C ESC8Q08119 714 aa4.82□□□□□ -1.64
SDO1YLR022C NSI1Q12457 570 aa4.82□□□□□ -1.64
SDO1YLR022C RRP5Q05022 1729 aaKnown RBP4.81□□□□□ -1.64
SDO1YLR022C PRP40P33203 583 aaKnown RBP4.81□□□□□ -1.64
SDO1YLR022C HSP78P33416 811 aa4.81□□□□□ -1.64
SDO1YLR022C REI1P38344 393 aaPredicted RBP4.81□□□□□ -1.64
SDO1YLR022C SHU2P38957 223 aa4.81□□□□□ -1.64
SDO1YLR022C DAK2P43550 591 aa4.81□□□□□ -1.64
SDO1YLR022C ECL1P48235 211 aa4.81□□□□□ -1.64
SDO1YLR022C OYE3P41816 400 aaPredicted RBP4.8□□□□□ -1.64
SDO1YLR022C EAR1Q03212 550 aa4.8□□□□□ -1.64
SDO1YLR022C RPS4AP0CX35 261 aaKnown RBP4.79□□□□□ -1.64
SDO1YLR022C RPS4BP0CX36 261 aaKnown RBP4.79□□□□□ -1.64
SDO1YLR022C ALT1P52893 592 aa4.79□□□□□ -1.64
SDO1YLR022C TY3B-IQ7LHG5 1498 aaKnown RBP4.78□□□□□ -1.64
SDO1YLR022C KAR2P16474 682 aaKnown RBP4.78□□□□□ -1.64
SDO1YLR022C YKL077WP36081 392 aa4.78□□□□□ -1.64
SDO1YLR022C MSH4P40965 878 aaPredicted RBP4.78□□□□□ -1.64
SDO1YLR022C PRP43P53131 767 aaKnown RBP4.78□□□□□ -1.64
SDO1YLR022C YOR059CQ08448 450 aaKnown RBP4.78□□□□□ -1.64
SDO1YLR022C UGA4P32837 571 aa4.77□□□□□ -1.65
SDO1YLR022C NEM1P38757 446 aa4.77□□□□□ -1.65
SDO1YLR022C YGR045CP53229 120 aa4.77□□□□□ -1.65
SDO1YLR022C ULP1Q02724 621 aa4.77□□□□□ -1.65
SDO1YLR022C DAL4Q04895 635 aa4.77□□□□□ -1.65
SDO1YLR022C TOS4Q06266 489 aa4.77□□□□□ -1.65
SDO1YLR022C OXR1Q08952 273 aa4.77□□□□□ -1.65
SDO1YLR022C SMY2P32909 740 aaKnown RBP4.76□□□□□ -1.65
SDO1YLR022C TAF5P38129 798 aa4.76□□□□□ -1.65
SDO1YLR022C SLS1P42900 643 aa4.76□□□□□ -1.65
SDO1YLR022C TAF1P46677 1066 aa4.76□□□□□ -1.65
SDO1YLR022C DUS1P53759 423 aaKnown RBP4.76□□□□□ -1.65
SDO1YLR022C YPL109CQ02981 657 aa4.76□□□□□ -1.65
SDO1YLR022C NOP8Q08287 484 aaPredicted RBP4.76□□□□□ -1.65
SDO1YLR022C HXK1P04806 485 aaKnown RBP4.75□□□□□ -1.65
SDO1YLR022C MSH3P25336 1018 aa4.75□□□□□ -1.65
SDO1YLR022C RPT1P33299 467 aaKnown RBP4.75□□□□□ -1.65
SDO1YLR022C NNK1P36003 928 aa4.75□□□□□ -1.65
SDO1YLR022C MTR4P47047 1073 aaKnown RBP4.75□□□□□ -1.65
SDO1YLR022C RSM26P47141 266 aa4.75□□□□□ -1.65
SDO1YLR022C ELA1P53861 379 aaPredicted RBP4.75□□□□□ -1.65
SDO1YLR022C SSY1Q03770 852 aa4.75□□□□□ -1.65
SDO1YLR022C CDA2Q06703 312 aa4.75□□□□□ -1.65
SDO1YLR022C AVO1Q08236 1176 aa4.75□□□□□ -1.65
SDO1YLR022C PSK1P31374 1356 aa4.75□□□□□ -1.65
SDO1YLR022C ROM2P51862 1356 aaKnown RBP4.75□□□□□ -1.65
SDO1YLR022C URB1P34241 1764 aaKnown RBP4.74□□□□□ -1.65
SDO1YLR022C VMA4P22203 233 aaKnown RBP4.74□□□□□ -1.65
SDO1YLR022C ADP1P25371 1049 aa4.74□□□□□ -1.65
SDO1YLR022C SLD2P34252 453 aa4.74□□□□□ -1.65
SDO1YLR022C RDH54P38086 958 aa4.74□□□□□ -1.65
SDO1YLR022C FAA3P39002 694 aa4.74□□□□□ -1.65
SDO1YLR022C GIP4P39732 760 aa4.74□□□□□ -1.65
SDO1YLR022C EAF6P47128 113 aa4.74□□□□□ -1.65
SDO1YLR022C ADI1Q03677 179 aa4.74□□□□□ -1.65
SDO1YLR022C YML020WQ03722 664 aa4.74□□□□□ -1.65
SDO1YLR022C UTP5Q04177 643 aaKnown RBP4.74□□□□□ -1.65
SDO1YLR022C TRE1Q08919 783 aa4.74□□□□□ -1.65
SDO1YLR022C YVC1Q12324 675 aa4.74□□□□□ -1.65
SDO1YLR022C SEC23P15303 768 aaKnown RBP4.73□□□□□ -1.65
SDO1YLR022C NFS1P25374 497 aa4.73□□□□□ -1.65
SDO1YLR022C PRO1P32264 428 aa4.73□□□□□ -1.65
SDO1YLR022C TSA1P34760 196 aaKnown RBP4.73□□□□□ -1.65
SDO1YLR022C SQT1P35184 431 aa4.73□□□□□ -1.65
SDO1YLR022C PEX28P38848 579 aa4.73□□□□□ -1.65
SDO1YLR022C SQS1P53866 767 aaKnown RBP4.73□□□□□ -1.65
SDO1YLR022C PEX13P80667 386 aa4.73□□□□□ -1.65
SDO1YLR022C RSF2P46974 1380 aa4.73□□□□□ -1.65
SDO1YLR022C RAD9P14737 1309 aa4.72□□□□□ -1.65
SDO1YLR022C SCP160P06105 1222 aaKnown RBP RIP-Chip data4.72□□□□□ -1.65not detected
SDO1YLR022C YEF3P16521 1044 aaKnown RBP4.72□□□□□ -1.65
SDO1YLR022C YAR028WP39548 234 aa4.72□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 36.8 ms