RNA–Protein interactions for RNA: YIL123W

SIM1, Transcript of Protein of the SUN family (Sim1p, Uth1p, Nca3p, Sun4p), yeastyeast

Gene SIM1, Length 1,431 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIM1YIL123W KRS1P15180 591 aaKnown RBP12.46□□□□□ -0.41
SIM1YIL123W GSY1P23337 708 aa12.46□□□□□ -0.41
SIM1YIL123W MRC1P25588 1096 aa12.46□□□□□ -0.41
SIM1YIL123W SPT21P35209 758 aa12.46□□□□□ -0.41
SIM1YIL123W SUL1P38359 859 aa12.46□□□□□ -0.41
SIM1YIL123W ORC6P38826 435 aa12.46□□□□□ -0.41
SIM1YIL123W ACA1P39970 489 aa12.46□□□□□ -0.41
SIM1YIL123W FMS1P50264 508 aa12.46□□□□□ -0.41
SIM1YIL123W LSC2P53312 427 aa12.46□□□□□ -0.41
SIM1YIL123W MFM1Q02783 413 aa12.46□□□□□ -0.41
SIM1YIL123W YEL076C-AP0CX16 216 aa12.45□□□□□ -0.42
SIM1YIL123W YLR464WP0CX17 216 aa12.45□□□□□ -0.42
SIM1YIL123W ISY1P21374 235 aaPredicted RBP12.45□□□□□ -0.42
SIM1YIL123W ISW1P38144 1129 aa12.45□□□□□ -0.42
SIM1YIL123W YEL076CP39971 216 aa12.45□□□□□ -0.42
SIM1YIL123W YGR273CP53329 174 aa12.45□□□□□ -0.42
SIM1YIL123W SUB2Q07478 446 aaKnown RBP12.45□□□□□ -0.42
SIM1YIL123W TLG2Q08144 397 aa12.45□□□□□ -0.42
SIM1YIL123W MSH3P25336 1018 aa12.45□□□□□ -0.42
SIM1YIL123W CTM1P38818 585 aa12.45□□□□□ -0.42
SIM1YIL123W OYE2Q03558 400 aaKnown RBP12.45□□□□□ -0.42
SIM1YIL123W YCG1Q06680 1035 aa12.45□□□□□ -0.42
SIM1YIL123W PSO2P30620 661 aa12.44□□□□□ -0.42
SIM1YIL123W NDT80P38830 627 aa12.44□□□□□ -0.42
SIM1YIL123W FYV8P46949 817 aaKnown RBP12.44□□□□□ -0.42
SIM1YIL123W FUS2Q05670 677 aa12.44□□□□□ -0.42
SIM1YIL123W YLH47Q06493 454 aa12.44□□□□□ -0.42
SIM1YIL123W OXR1Q08952 273 aa12.44□□□□□ -0.42
SIM1YIL123W THS1P04801 734 aaKnown RBP12.43□□□□□ -0.42
SIM1YIL123W SPO11P23179 398 aa12.43□□□□□ -0.42
SIM1YIL123W UGA4P32837 571 aa12.43□□□□□ -0.42
SIM1YIL123W SHM1P37292 490 aaPredicted RBP12.43□□□□□ -0.42
SIM1YIL123W APL4Q12028 832 aa12.43□□□□□ -0.42
SIM1YIL123W PHO88P38264 188 aaPredicted RBP12.42□□□□□ -0.42
SIM1YIL123W NUP82P40368 713 aa12.42□□□□□ -0.42
SIM1YIL123W JSN1P47135 1091 aaKnown RBP RIP-Chip data12.42□□□□□ -0.42not detected
SIM1YIL123W ILV1P00927 576 aaKnown RBP12.41□□□□□ -0.42
SIM1YIL123W RPS6AP0CX37 236 aaKnown RBP12.41□□□□□ -0.42
SIM1YIL123W RPS6BP0CX38 236 aaPredicted RBP12.41□□□□□ -0.42
SIM1YIL123W RAD18P10862 487 aa12.41□□□□□ -0.42
SIM1YIL123W SEC65P29478 273 aa12.41□□□□□ -0.42
SIM1YIL123W YKL091CP33324 310 aaKnown RBP12.41□□□□□ -0.42
SIM1YIL123W MIP6P38760 659 aaKnown RBP12.41□□□□□ -0.42
SIM1YIL123W SPT8P38915 602 aa12.41□□□□□ -0.42
SIM1YIL123W ORC4P54791 529 aa12.41□□□□□ -0.42
SIM1YIL123W YOL075CQ08234 1294 aa12.41□□□□□ -0.42
SIM1YIL123W ARP6Q12509 438 aa12.41□□□□□ -0.42
SIM1YIL123W SSA1P10591 642 aaKnown RBP12.4□□□□□ -0.42
SIM1YIL123W OM45P16547 393 aa12.4□□□□□ -0.42
SIM1YIL123W LEO1P38439 464 aa12.4□□□□□ -0.42
SIM1YIL123W RTT107P38850 1070 aa12.4□□□□□ -0.42
SIM1YIL123W HOS3Q02959 697 aaKnown RBP12.4□□□□□ -0.42
SIM1YIL123W EFM2P38347 419 aa12.39□□□□□ -0.43
SIM1YIL123W VHR2P40041 505 aa12.39□□□□□ -0.43
SIM1YIL123W LIF1P53150 421 aa12.39□□□□□ -0.43
SIM1YIL123W ALF1P53904 254 aa12.39□□□□□ -0.43
SIM1YIL123W YML037CQ03703 340 aa12.39□□□□□ -0.43
SIM1YIL123W YAP7Q08182 245 aa12.39□□□□□ -0.43
SIM1YIL123W RAM2P29703 316 aa12.38□□□□□ -0.43
SIM1YIL123W PCH2P38126 564 aa12.38□□□□□ -0.43
SIM1YIL123W HMI1Q12039 706 aa12.38□□□□□ -0.43
SIM1YIL123W PHR1P05066 565 aaKnown RBP RIP-Chip data12.37□□□□□ -0.43not detected
SIM1YIL123W PER1P25625 357 aa12.37□□□□□ -0.43
SIM1YIL123W SIP3P38717 1229 aa12.37□□□□□ -0.43
SIM1YIL123W HUL4P40985 892 aa12.37□□□□□ -0.43
SIM1YIL123W OSW7P43611 510 aa12.37□□□□□ -0.43
SIM1YIL123W GUP1P53154 560 aa12.37□□□□□ -0.43
SIM1YIL123W PGA2P53903 129 aa12.37□□□□□ -0.43
SIM1YIL123W SEC5P89102 971 aa12.37□□□□□ -0.43
SIM1YIL123W TMA64Q04600 565 aaKnown RBP12.37□□□□□ -0.43
SIM1YIL123W COG4Q06096 861 aa12.37□□□□□ -0.43
SIM1YIL123W ATG9Q12142 997 aa12.37□□□□□ -0.43
SIM1YIL123W NOP58Q12499 511 aaKnown RBP12.37□□□□□ -0.43
SIM1YIL123W MAK16P10962 306 aaPredicted RBP12.37□□□□□ -0.43
SIM1YIL123W TGL1P34163 548 aa12.37□□□□□ -0.43
SIM1YIL123W PEA2P40091 420 aa12.37□□□□□ -0.43
SIM1YIL123W BRE2P43132 505 aa12.37□□□□□ -0.43
SIM1YIL123W HFM1P51979 1187 aa12.37□□□□□ -0.43
SIM1YIL123W VPS38Q05919 439 aa12.37□□□□□ -0.43
SIM1YIL123W WHI4Q07655 649 aaKnown RBP12.37□□□□□ -0.43
SIM1YIL123W GUD1Q07729 489 aa12.37□□□□□ -0.43
SIM1YIL123W YPL216WQ08964 1102 aa12.37□□□□□ -0.43
SIM1YIL123W GIN4Q12263 1142 aa12.37□□□□□ -0.43
SIM1YIL123W PGM1P33401 570 aaKnown RBP12.36□□□□□ -0.43
SIM1YIL123W OCT1P35999 772 aa12.36□□□□□ -0.43
SIM1YIL123W PPS1P38148 807 aa12.36□□□□□ -0.43
SIM1YIL123W PIH1P38768 344 aa12.36□□□□□ -0.43
SIM1YIL123W CEP3P40969 608 aa12.36□□□□□ -0.43
SIM1YIL123W CNM67P53865 581 aaKnown RBP12.36□□□□□ -0.43
SIM1YIL123W SPH1Q06160 661 aa12.36□□□□□ -0.43
SIM1YIL123W YLR326WQ06170 240 aaKnown RBP12.36□□□□□ -0.43
SIM1YIL123W TCO89Q08921 799 aa12.36□□□□□ -0.43
SIM1YIL123W FBP1P09201 348 aa12.35□□□□□ -0.43
SIM1YIL123W PFK1P16861 987 aaKnown RBP12.35□□□□□ -0.43
SIM1YIL123W VFA1P40080 203 aa12.35□□□□□ -0.43
SIM1YIL123W ALD6P54115 500 aaKnown RBP12.35□□□□□ -0.43
SIM1YIL123W CWC15Q03772 175 aaKnown RBP12.35□□□□□ -0.43
SIM1YIL123W YLR287CQ05881 355 aa12.35□□□□□ -0.43
SIM1YIL123W PET111P08468 800 aa12.34□□□□□ -0.43
SIM1YIL123W RPC53P25441 422 aa12.34□□□□□ -0.43
Retrieved 100 of 5,963 RNA–protein pairs in 30.4 ms