RNA–Protein interactions for RNA: YHR150W

PEX28, Transcript of Peroxisomal integral membrane peroxin, yeastyeast

Gene PEX28, Length 1,740 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX28YHR150W SAP1P39955 897 aaKnown RBP8.29□□□□□ -1.08
PEX28YHR150W DAK2P43550 591 aa8.29□□□□□ -1.08
PEX28YHR150W MAL13P53338 473 aa8.29□□□□□ -1.08
PEX28YHR150W ATG23Q06671 453 aa8.29□□□□□ -1.08
PEX28YHR150W VAC14Q06708 880 aa8.29□□□□□ -1.08
PEX28YHR150W YOL075CQ08234 1294 aa8.29□□□□□ -1.08
PEX28YHR150W CLF1Q12309 687 aaPredicted RBP8.29□□□□□ -1.08
PEX28YHR150W CHS3P29465 1165 aa8.29□□□□□ -1.08
PEX28YHR150W YEL043WP32618 956 aa8.29□□□□□ -1.08
PEX28YHR150W RPC25P35718 212 aa8.29□□□□□ -1.08
PEX28YHR150W MCX1P38323 520 aaPredicted RBP8.29□□□□□ -1.08
PEX28YHR150W SHQ1P40486 507 aaPredicted RBP8.29□□□□□ -1.08
PEX28YHR150W YGL140CP53120 1219 aa8.29□□□□□ -1.08
PEX28YHR150W UME1Q03010 460 aa8.29□□□□□ -1.08
PEX28YHR150W TRS120Q04183 1289 aa8.29□□□□□ -1.08
PEX28YHR150W TUF1P02992 437 aaKnown RBP8.28□□□□□ -1.08
PEX28YHR150W ADP1P25371 1049 aa8.28□□□□□ -1.08
PEX28YHR150W SAS3P34218 831 aa8.28□□□□□ -1.08
PEX28YHR150W ERG7P38604 731 aa8.28□□□□□ -1.08
PEX28YHR150W TOM71P38825 639 aaKnown RBP8.28□□□□□ -1.08
PEX28YHR150W HFM1P51979 1187 aa8.28□□□□□ -1.08
PEX28YHR150W VPS4P52917 437 aa8.28□□□□□ -1.08
PEX28YHR150W MDM1Q01846 1127 aa8.28□□□□□ -1.08
PEX28YHR150W DSE3Q08729 430 aa8.28□□□□□ -1.08
PEX28YHR150W NUC1P08466 329 aa8.27□□□□□ -1.09
PEX28YHR150W MAK11P20484 414 aaKnown RBP8.27□□□□□ -1.09
PEX28YHR150W SMF1P38925 575 aa8.27□□□□□ -1.09
PEX28YHR150W VPS45P38932 577 aa8.27□□□□□ -1.09
PEX28YHR150W STT3P39007 718 aaKnown RBP8.27□□□□□ -1.09
PEX28YHR150W EFM4P40516 257 aa8.27□□□□□ -1.09
PEX28YHR150W UBA2P52488 636 aa8.27□□□□□ -1.09
PEX28YHR150W UTP5Q04177 643 aaKnown RBP8.27□□□□□ -1.09
PEX28YHR150W YPL216WQ08964 1102 aa8.27□□□□□ -1.09
PEX28YHR150W CWC2Q12046 339 aaPredicted RBP8.27□□□□□ -1.09
PEX28YHR150W PMA1P05030 918 aaKnown RBP8.26□□□□□ -1.09
PEX28YHR150W THR4P16120 514 aaKnown RBP8.26□□□□□ -1.09
PEX28YHR150W STV1P37296 890 aa8.26□□□□□ -1.09
PEX28YHR150W BUD16P39988 312 aa8.26□□□□□ -1.09
PEX28YHR150W VFA1P40080 203 aa8.26□□□□□ -1.09
PEX28YHR150W SDA1P53313 767 aaKnown RBP8.26□□□□□ -1.09
PEX28YHR150W SQS1P53866 767 aaKnown RBP8.26□□□□□ -1.09
PEX28YHR150W BNI5P53890 448 aaKnown RBP8.26□□□□□ -1.09
PEX28YHR150W RNT1Q02555 471 aa8.26□□□□□ -1.09
PEX28YHR150W CSM3Q04659 317 aa8.26□□□□□ -1.09
PEX28YHR150W YLR001CQ07895 862 aa8.26□□□□□ -1.09
PEX28YHR150W YAP7Q08182 245 aa8.26□□□□□ -1.09
PEX28YHR150W OSH2Q12451 1283 aa8.26□□□□□ -1.09
PEX28YHR150W HKR1P41809 1802 aa8.26□□□□□ -1.09
PEX28YHR150W SRP54P20424 541 aaKnown RBP8.26□□□□□ -1.09
PEX28YHR150W RAD57P25301 460 aa8.26□□□□□ -1.09
PEX28YHR150W PDC6P26263 563 aaKnown RBP8.26□□□□□ -1.09
PEX28YHR150W CST26P38226 397 aa8.26□□□□□ -1.09
PEX28YHR150W CTK3P46963 296 aaPredicted RBP8.26□□□□□ -1.09
PEX28YHR150W LAP2Q10740 671 aa8.26□□□□□ -1.09
PEX28YHR150W RPS9BP05755 195 aaKnown RBP8.25□□□□□ -1.09
PEX28YHR150W SAM2P19358 384 aaKnown RBP8.25□□□□□ -1.09
PEX28YHR150W PET10P36139 283 aa8.25□□□□□ -1.09
PEX28YHR150W RGD1P38339 666 aa8.25□□□□□ -1.09
PEX28YHR150W CCT3P39077 534 aaKnown RBP8.25□□□□□ -1.09
PEX28YHR150W UBP9P39967 754 aa8.25□□□□□ -1.09
PEX28YHR150W YAP5P40574 245 aa8.25□□□□□ -1.09
PEX28YHR150W MTC3P53077 123 aa8.25□□□□□ -1.09
PEX28YHR150W DSE4P53753 1117 aa8.25□□□□□ -1.09
PEX28YHR150W YMR102CQ03177 834 aa8.25□□□□□ -1.09
PEX28YHR150W ATG20Q07528 640 aa8.25□□□□□ -1.09
PEX28YHR150W SPO75Q07798 868 aa8.25□□□□□ -1.09
PEX28YHR150W SLK19Q08581 821 aaKnown RBP8.25□□□□□ -1.09
PEX28YHR150W AIM7Q12156 149 aa8.25□□□□□ -1.09
PEX28YHR150W PPR1P07272 904 aaPredicted RBP8.24□□□□□ -1.09
PEX28YHR150W RPL8AP17076 256 aaKnown RBP8.24□□□□□ -1.09
PEX28YHR150W HPR1P17629 752 aaKnown RBP8.24□□□□□ -1.09
PEX28YHR150W GAP1P19145 602 aaPredicted RBP8.24□□□□□ -1.09
PEX28YHR150W PWP2P25635 923 aaKnown RBP8.24□□□□□ -1.09
PEX28YHR150W SRB4P32569 687 aa8.24□□□□□ -1.09
PEX28YHR150W YKL091CP33324 310 aaKnown RBP8.24□□□□□ -1.09
PEX28YHR150W BYE1P36106 594 aa8.24□□□□□ -1.09
PEX28YHR150W PES4P39684 611 aa8.24□□□□□ -1.09
PEX28YHR150W HUL4P40985 892 aa8.24□□□□□ -1.09
PEX28YHR150W IES1P43579 692 aa8.24□□□□□ -1.09
PEX28YHR150W VTC2P43585 828 aa8.24□□□□□ -1.09
PEX28YHR150W YJL171CP46992 396 aa8.24□□□□□ -1.09
PEX28YHR150W YGR153WP48238 217 aa8.24□□□□□ -1.09
PEX28YHR150W ASE1P50275 885 aa8.24□□□□□ -1.09
PEX28YHR150W SNU71P53207 620 aaKnown RBP8.24□□□□□ -1.09
PEX28YHR150W LSB1P53281 241 aa8.24□□□□□ -1.09
PEX28YHR150W SKG3Q06315 1026 aa8.24□□□□□ -1.09
PEX28YHR150W MYO1P08964 1928 aa8.23□□□□□ -1.09
PEX28YHR150W TOM70P07213 617 aaKnown RBP8.23□□□□□ -1.09
PEX28YHR150W KIN1P13185 1064 aa8.23□□□□□ -1.09
PEX28YHR150W OM45P16547 393 aa8.23□□□□□ -1.09
PEX28YHR150W PAP1P29468 568 aaKnown RBP8.23□□□□□ -1.09
PEX28YHR150W ECM32P32644 1121 aaKnown RBP8.23□□□□□ -1.09
PEX28YHR150W SLD2P34252 453 aa8.23□□□□□ -1.09
PEX28YHR150W SLI15P38283 698 aa8.23□□□□□ -1.09
PEX28YHR150W NGL3Q03210 505 aa8.23□□□□□ -1.09
PEX28YHR150W OMS1Q06668 471 aa8.23□□□□□ -1.09
PEX28YHR150W VIP1Q06685 1146 aaKnown RBP8.23□□□□□ -1.09
PEX28YHR150W NEW1Q08972 1196 aaKnown RBP8.23□□□□□ -1.09
PEX28YHR150W SEC20P28791 383 aa8.23□□□□□ -1.09
PEX28YHR150W MUD2P36084 527 aaKnown RBP8.23□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 9.7 ms