RNA–Protein interactions for RNA: YGR143W

SKN1, Transcript of Protein involved in sphingolipid biosynthesis, yeastyeast

Gene SKN1, Length 2,316 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKN1YGR143W YML108WQ03759 105 aa6.39□□□□□ -1.39
SKN1YGR143W ENT2Q05785 613 aa6.39□□□□□ -1.39
SKN1YGR143W ARP8Q12386 881 aaKnown RBP RIP-Chip data6.39□□□□□ -1.39not detected
SKN1YGR143W TPM1P17536 199 aaKnown RBP6.38□□□□□ -1.39
SKN1YGR143W OCA4P25366 362 aa6.38□□□□□ -1.39
SKN1YGR143W MRC1P25588 1096 aa6.38□□□□□ -1.39
SKN1YGR143W PLC1P32383 869 aa6.38□□□□□ -1.39
SKN1YGR143W LHS1P36016 881 aa6.38□□□□□ -1.39
SKN1YGR143W SAK1P38990 1142 aa6.38□□□□□ -1.39
SKN1YGR143W VTI1Q04338 217 aa6.38□□□□□ -1.39
SKN1YGR143W PUF6Q04373 656 aaKnown RBP6.38□□□□□ -1.39
SKN1YGR143W RSA3Q05942 220 aaKnown RBP6.38□□□□□ -1.39
SKN1YGR143W TSR2Q06672 205 aaKnown RBP6.38□□□□□ -1.39
SKN1YGR143W CTI6Q08923 506 aa6.38□□□□□ -1.39
SKN1YGR143W SSF2Q12153 453 aaPredicted RBP6.38□□□□□ -1.39
SKN1YGR143W PRT1P06103 763 aaKnown RBP6.38□□□□□ -1.39
SKN1YGR143W HIS3P06633 220 aa6.38□□□□□ -1.39
SKN1YGR143W HEM1P09950 548 aaPredicted RBP6.38□□□□□ -1.39
SKN1YGR143W APN1P22936 367 aa6.38□□□□□ -1.39
SKN1YGR143W SEC8P32855 1065 aa6.38□□□□□ -1.39
SKN1YGR143W HCS1P34243 683 aa6.38□□□□□ -1.39
SKN1YGR143W BMH2P34730 273 aaKnown RBP6.38□□□□□ -1.39
SKN1YGR143W RTT105P40063 208 aa6.38□□□□□ -1.39
SKN1YGR143W RIC1P40395 1056 aa6.38□□□□□ -1.39
SKN1YGR143W RIM21P48565 533 aa6.38□□□□□ -1.39
SKN1YGR143W YGL082WP53155 381 aa6.38□□□□□ -1.39
SKN1YGR143W MET7Q08645 548 aa6.38□□□□□ -1.39
SKN1YGR143W ADH4P10127 382 aa6.37□□□□□ -1.39
SKN1YGR143W RPB4P20433 221 aaPredicted RBP6.37□□□□□ -1.39
SKN1YGR143W MNR2P35724 969 aa6.37□□□□□ -1.39
SKN1YGR143W ECM4P36156 370 aa6.37□□□□□ -1.39
SKN1YGR143W VID28P40547 921 aa6.37□□□□□ -1.39
SKN1YGR143W LSG1P53145 640 aaKnown RBP6.37□□□□□ -1.39
SKN1YGR143W THI22Q06490 572 aa6.37□□□□□ -1.39
SKN1YGR143W SPN1Q06505 410 aaPredicted RBP6.37□□□□□ -1.39
SKN1YGR143W YOR352WQ08816 343 aa6.37□□□□□ -1.39
SKN1YGR143W ARD1P07347 238 aaPredicted RBP6.37□□□□□ -1.39
SKN1YGR143W MER1P16523 270 aa6.37□□□□□ -1.39
SKN1YGR143W VMA1P17255 1071 aaKnown RBP6.37□□□□□ -1.39
SKN1YGR143W PTR2P32901 601 aa6.37□□□□□ -1.39
SKN1YGR143W SRL3P36167 246 aa6.37□□□□□ -1.39
SKN1YGR143W REI1P38344 393 aaPredicted RBP6.37□□□□□ -1.39
SKN1YGR143W SYG1P40528 902 aa6.37□□□□□ -1.39
SKN1YGR143W RRN11Q04712 507 aa6.37□□□□□ -1.39
SKN1YGR143W RKM1Q08961 583 aaPredicted RBP6.37□□□□□ -1.39
SKN1YGR143W PKC1P24583 1151 aa6.36□□□□□ -1.39
SKN1YGR143W CDC60P26637 1090 aaKnown RBP6.36□□□□□ -1.39
SKN1YGR143W RPN2P32565 945 aaKnown RBP6.36□□□□□ -1.39
SKN1YGR143W TOM20P35180 183 aa6.36□□□□□ -1.39
SKN1YGR143W MET1P36150 593 aa6.36□□□□□ -1.39
SKN1YGR143W MPT5P39016 859 aaKnown RBP RIP-Chip data6.36□□□□□ -1.39 RIP-Chip
SKN1YGR143W RLP7P40693 322 aaKnown RBP6.36□□□□□ -1.39
SKN1YGR143W PXA1P41909 870 aa6.36□□□□□ -1.39
SKN1YGR143W JJJ2P46997 583 aa6.36□□□□□ -1.39
SKN1YGR143W COP1P53622 1201 aaKnown RBP6.36□□□□□ -1.39
SKN1YGR143W TIM50Q02776 476 aa6.36□□□□□ -1.39
SKN1YGR143W SRC1Q03707 834 aa6.36□□□□□ -1.39
SKN1YGR143W ECM11Q04110 302 aa6.36□□□□□ -1.39
SKN1YGR143W SSC1P0CS90 654 aaKnown RBP6.36□□□□□ -1.39
SKN1YGR143W SIT4P20604 311 aa6.36□□□□□ -1.39
SKN1YGR143W PRP22P24384 1145 aaKnown RBP6.36□□□□□ -1.39
SKN1YGR143W SLA2P33338 968 aa6.36□□□□□ -1.39
SKN1YGR143W RTS1P38903 757 aa6.36□□□□□ -1.39
SKN1YGR143W NUP60P39705 539 aa6.36□□□□□ -1.39
SKN1YGR143W IRR1P40541 1150 aa6.36□□□□□ -1.39
SKN1YGR143W SAP155P43612 1002 aa6.36□□□□□ -1.39
SKN1YGR143W YGL242CP53066 181 aa6.36□□□□□ -1.39
SKN1YGR143W DIP5P53388 608 aa6.36□□□□□ -1.39
SKN1YGR143W COG4Q06096 861 aa6.36□□□□□ -1.39
SKN1YGR143W SMC6Q12749 1114 aa6.36□□□□□ -1.39
SKN1YGR143W SER1P33330 395 aaKnown RBP6.35□□□□□ -1.39
SKN1YGR143W MRPL40P36534 297 aa6.35□□□□□ -1.39
SKN1YGR143W BDH2P39713 417 aa6.35□□□□□ -1.39
SKN1YGR143W MVP1P40959 511 aaKnown RBP6.35□□□□□ -1.39
SKN1YGR143W MGR3Q04472 501 aa6.35□□□□□ -1.39
SKN1YGR143W RTT109Q07794 436 aa6.35□□□□□ -1.39
SKN1YGR143W MRP8P35719 219 aa6.34□□□□□ -1.39
SKN1YGR143W YBR287WP38355 427 aa6.34□□□□□ -1.39
SKN1YGR143W OTU2P38747 307 aaKnown RBP6.34□□□□□ -1.39
SKN1YGR143W MON1P53129 644 aa6.34□□□□□ -1.39
SKN1YGR143W ZDS2P54786 942 aa6.34□□□□□ -1.39
SKN1YGR143W CUS1Q02554 436 aaPredicted RBP6.34□□□□□ -1.39
SKN1YGR143W NOP12Q08208 459 aaKnown RBP6.34□□□□□ -1.39
SKN1YGR143W PHM7Q12252 991 aa6.34□□□□□ -1.39
SKN1YGR143W COQ4O13525 335 aa6.34□□□□□ -1.39
SKN1YGR143W DCD1P06773 312 aa6.34□□□□□ -1.39
SKN1YGR143W FUS1P11710 512 aa6.34□□□□□ -1.39
SKN1YGR143W BMH1P29311 267 aaKnown RBP6.34□□□□□ -1.39
SKN1YGR143W RPN12P32496 274 aa6.34□□□□□ -1.39
SKN1YGR143W TRZ1P36159 838 aaPredicted RBP6.34□□□□□ -1.39
SKN1YGR143W FYV8P46949 817 aaKnown RBP6.34□□□□□ -1.39
SKN1YGR143W YGR266WP53326 701 aa6.34□□□□□ -1.39
SKN1YGR143W ULP1Q02724 621 aa6.34□□□□□ -1.39
SKN1YGR143W NOT5Q12514 560 aaPredicted RBP6.34□□□□□ -1.39
SKN1YGR143W LSO2Q3E772 92 aaKnown RBP6.34□□□□□ -1.39
SKN1YGR143W PMD1P32634 1753 aa6.33□□□□□ -1.4
SKN1YGR143W PET122P10355 254 aa6.33□□□□□ -1.4
SKN1YGR143W ARG8P18544 423 aa6.33□□□□□ -1.4
SKN1YGR143W HNM1P19807 563 aa6.33□□□□□ -1.4
SKN1YGR143W RPC19P28000 142 aaKnown RBP6.33□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms