RNA–Protein interactions for RNA: YGL173C

XRN1, Transcript of Evolutionarily-conserved 5'-3' exonuclease, yeastyeast

Gene XRN1, Length 4,587 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
XRN1YGL173C CBC2Q08920 208 aaKnown RBP RIP-Chip data3.68□□□□□ -1.82not detected
XRN1YGL173C VMA3P25515 160 aa3.68□□□□□ -1.82
XRN1YGL173C TUM1Q08686 304 aaKnown RBP3.68□□□□□ -1.82
XRN1YGL173C YDL206WQ12424 762 aa3.68□□□□□ -1.82
XRN1YGL173C ERP4Q12450 207 aa3.68□□□□□ -1.82
XRN1YGL173C TY4B-HP0C2J7 1802 aa3.68□□□□□ -1.82
XRN1YGL173C TY4B-JP47024 1803 aa3.68□□□□□ -1.82
XRN1YGL173C LEU1P07264 779 aaKnown RBP3.68□□□□□ -1.82
XRN1YGL173C GRX7P38068 203 aa3.68□□□□□ -1.82
XRN1YGL173C CAF16P43569 289 aa3.68□□□□□ -1.82
XRN1YGL173C YFR016CP43597 1233 aaKnown RBP3.68□□□□□ -1.82
XRN1YGL173C RCF1Q03713 159 aa3.68□□□□□ -1.82
XRN1YGL173C MGR3Q04472 501 aa3.68□□□□□ -1.82
XRN1YGL173C SRM1P21827 482 aa3.68□□□□□ -1.82
XRN1YGL173C PTP2P29461 750 aa3.68□□□□□ -1.82
XRN1YGL173C LDH1P38139 375 aa3.68□□□□□ -1.82
XRN1YGL173C RPS26AP39938 119 aaKnown RBP3.68□□□□□ -1.82
XRN1YGL173C RPS26BP39939 119 aaKnown RBP3.68□□□□□ -1.82
XRN1YGL173C ACA1P39970 489 aa3.68□□□□□ -1.82
XRN1YGL173C SET2P46995 733 aaKnown RBP3.68□□□□□ -1.82
XRN1YGL173C TYW3P53177 273 aa3.68□□□□□ -1.82
XRN1YGL173C ATG20Q07528 640 aa3.68□□□□□ -1.82
XRN1YGL173C PAT1P25644 796 aaKnown RBP3.67□□□□□ -1.82
XRN1YGL173C PET309P32522 965 aaPredicted RBP3.67□□□□□ -1.82
XRN1YGL173C PCM1P38628 557 aaKnown RBP3.67□□□□□ -1.82
XRN1YGL173C CCT5P40413 562 aaKnown RBP3.67□□□□□ -1.82
XRN1YGL173C ECM16Q04217 1267 aaKnown RBP3.67□□□□□ -1.82
XRN1YGL173C AMN1P38285 549 aaPredicted RBP3.67□□□□□ -1.82
XRN1YGL173C GDH3P39708 457 aa3.67□□□□□ -1.82
XRN1YGL173C YNL035CP53962 389 aaKnown RBP3.67□□□□□ -1.82
XRN1YGL173C ULP1Q02724 621 aa3.67□□□□□ -1.82
XRN1YGL173C SXM1Q04175 944 aaKnown RBP3.67□□□□□ -1.82
XRN1YGL173C HFD1Q04458 532 aa3.67□□□□□ -1.82
XRN1YGL173C OSH2Q12451 1283 aa3.67□□□□□ -1.82
XRN1YGL173C SNF2P22082 1703 aa3.67□□□□□ -1.82
XRN1YGL173C SEM1O94742 89 aa3.67□□□□□ -1.82
XRN1YGL173C SST2P11972 698 aaKnown RBP3.67□□□□□ -1.82
XRN1YGL173C DBP5P20449 482 aaKnown RBP3.67□□□□□ -1.82
XRN1YGL173C GSY1P23337 708 aa3.67□□□□□ -1.82
XRN1YGL173C MLF3P32047 452 aa3.67□□□□□ -1.82
XRN1YGL173C JNM1P36224 373 aa3.67□□□□□ -1.82
XRN1YGL173C YBL086CP38177 466 aa3.67□□□□□ -1.82
XRN1YGL173C NOP16P40007 231 aaKnown RBP3.67□□□□□ -1.82
XRN1YGL173C SAP185P40856 1058 aa3.67□□□□□ -1.82
XRN1YGL173C OCA1P50946 238 aaPredicted RBP3.67□□□□□ -1.82
XRN1YGL173C YGL140CP53120 1219 aa3.67□□□□□ -1.82
XRN1YGL173C UME1Q03010 460 aa3.67□□□□□ -1.82
XRN1YGL173C RSC2Q06488 889 aa3.67□□□□□ -1.82
XRN1YGL173C USO1P25386 1790 aa3.67□□□□□ -1.82
XRN1YGL173C RNA1P11745 407 aaKnown RBP3.66□□□□□ -1.82
XRN1YGL173C HOP1P20050 605 aa3.66□□□□□ -1.82
XRN1YGL173C ISC10P32645 267 aa3.66□□□□□ -1.82
XRN1YGL173C BLI1P35727 113 aa3.66□□□□□ -1.82
XRN1YGL173C FAA3P39002 694 aa3.66□□□□□ -1.82
XRN1YGL173C GZF3P42944 551 aaKnown RBP3.66□□□□□ -1.82
XRN1YGL173C CNN1P43618 361 aa3.66□□□□□ -1.82
XRN1YGL173C ESC2Q06340 456 aa3.66□□□□□ -1.82
XRN1YGL173C NOP58Q12499 511 aaKnown RBP3.66□□□□□ -1.82
XRN1YGL173C GIP1P38229 639 aa3.66□□□□□ -1.82
XRN1YGL173C RAD55P38953 406 aa3.66□□□□□ -1.82
XRN1YGL173C YJL181WP46987 611 aa3.66□□□□□ -1.82
XRN1YGL173C YKE2P52553 114 aa3.66□□□□□ -1.82
XRN1YGL173C SPO71Q03868 1245 aa3.66□□□□□ -1.82
XRN1YGL173C TRE2Q08693 809 aa3.66□□□□□ -1.82
XRN1YGL173C YTM1Q12024 460 aaPredicted RBP3.66□□□□□ -1.82
XRN1YGL173C MED1Q12321 566 aa3.66□□□□□ -1.82
XRN1YGL173C CCP1P00431 361 aa3.66□□□□□ -1.82
XRN1YGL173C SEC2P17065 759 aa3.66□□□□□ -1.82
XRN1YGL173C TAF1P46677 1066 aa3.66□□□□□ -1.82
XRN1YGL173C HNT2P49775 206 aa3.66□□□□□ -1.82
XRN1YGL173C TSR2Q06672 205 aaKnown RBP3.66□□□□□ -1.82
XRN1YGL173C IOC2Q12072 812 aa3.66□□□□□ -1.82
XRN1YGL173C SFI1Q12369 946 aa3.66□□□□□ -1.82
XRN1YGL173C SWI6P09959 803 aa3.66□□□□□ -1.82
XRN1YGL173C CBF2P32504 956 aa3.66□□□□□ -1.82
XRN1YGL173C HBS1P32769 611 aaKnown RBP3.66□□□□□ -1.82
XRN1YGL173C RGD1P38339 666 aa3.66□□□□□ -1.82
XRN1YGL173C MNN11P46985 422 aaKnown RBP3.66□□□□□ -1.82
XRN1YGL173C STR2P47164 639 aa3.66□□□□□ -1.82
XRN1YGL173C TFC6Q06339 672 aa3.66□□□□□ -1.82
XRN1YGL173C YLH47Q06493 454 aa3.66□□□□□ -1.82
XRN1YGL173C ATG13Q06628 738 aa3.66□□□□□ -1.82
XRN1YGL173C CLF1Q12309 687 aaPredicted RBP3.66□□□□□ -1.82
XRN1YGL173C TRX2P22803 104 aaKnown RBP3.65□□□□□ -1.82
XRN1YGL173C TIM23P32897 222 aa3.65□□□□□ -1.82
XRN1YGL173C NPR3P38742 1146 aa3.65□□□□□ -1.82
XRN1YGL173C HUL4P40985 892 aa3.65□□□□□ -1.82
XRN1YGL173C FAA4P47912 694 aaKnown RBP3.65□□□□□ -1.82
XRN1YGL173C SPC105P53148 917 aa3.65□□□□□ -1.82
XRN1YGL173C BDS1Q08347 646 aa3.65□□□□□ -1.82
XRN1YGL173C VPS5Q92331 675 aa3.65□□□□□ -1.82
XRN1YGL173C CDC48P25694 835 aaKnown RBP3.65□□□□□ -1.82
XRN1YGL173C DAL1P32375 460 aa3.65□□□□□ -1.82
XRN1YGL173C NPL4P33755 580 aa3.65□□□□□ -1.82
XRN1YGL173C MDJ1P35191 511 aa3.65□□□□□ -1.82
XRN1YGL173C MPH1P40562 993 aa3.65□□□□□ -1.82
XRN1YGL173C GPP1P41277 250 aaKnown RBP3.65□□□□□ -1.82
XRN1YGL173C PRP3Q03338 469 aaPredicted RBP3.65□□□□□ -1.82
XRN1YGL173C SPR28Q04921 423 aa3.65□□□□□ -1.82
XRN1YGL173C UTR2P32623 467 aa3.65□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms