RNA–Protein interactions for RNA: YER098W

UBP9, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeastyeast

Gene UBP9, Length 2,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP9YER098W TIF35Q04067 274 aaKnown RBP6.05□□□□□ -1.44
UBP9YER098W YDL121CQ07541 149 aa6.05□□□□□ -1.44
UBP9YER098W ULS1Q08562 1619 aa6.05□□□□□ -1.44
UBP9YER098W PRP5P21372 849 aaPredicted RBP6.04□□□□□ -1.44
UBP9YER098W MKK2P32491 506 aa6.04□□□□□ -1.44
UBP9YER098W NPL3Q01560 414 aaKnown RBP RIP-Chip data6.04□□□□□ -1.44not detected
UBP9YER098W GIC2Q06648 383 aa6.04□□□□□ -1.44
UBP9YER098W THI73Q07904 523 aa6.04□□□□□ -1.44
UBP9YER098W YOR378WQ08902 515 aa6.04□□□□□ -1.44
UBP9YER098W SLX4Q12098 748 aa6.04□□□□□ -1.44
UBP9YER098W YPL066WQ12194 479 aa6.04□□□□□ -1.44
UBP9YER098W RGP1P16664 663 aa6.04□□□□□ -1.44
UBP9YER098W MEF1P25039 761 aa6.04□□□□□ -1.44
UBP9YER098W CDC11P32458 415 aa6.04□□□□□ -1.44
UBP9YER098W DEF1P35732 738 aaKnown RBP6.04□□□□□ -1.44
UBP9YER098W CCC2P38995 1004 aa6.04□□□□□ -1.44
UBP9YER098W ENT3P47160 408 aa6.04□□□□□ -1.44
UBP9YER098W PPT1P53043 513 aa6.04□□□□□ -1.44
UBP9YER098W YNL193WP53870 558 aa6.04□□□□□ -1.44
UBP9YER098W ARG82P07250 355 aa6.03□□□□□ -1.44
UBP9YER098W PWP2P25635 923 aaKnown RBP6.03□□□□□ -1.44
UBP9YER098W YKL107WP34251 309 aa6.03□□□□□ -1.44
UBP9YER098W SHU2P38957 223 aa6.03□□□□□ -1.44
UBP9YER098W YGL176CP46945 554 aa6.03□□□□□ -1.44
UBP9YER098W UME1Q03010 460 aa6.03□□□□□ -1.44
UBP9YER098W BMT6Q12291 365 aa6.03□□□□□ -1.44
UBP9YER098W EDE1P34216 1381 aa6.03□□□□□ -1.44
UBP9YER098W DLD1P32891 587 aa6.02□□□□□ -1.44
UBP9YER098W SND1Q04007 877 aa6.02□□□□□ -1.44
UBP9YER098W RKM4Q12504 494 aa6.02□□□□□ -1.44
UBP9YER098W HBN1Q96VH4 193 aa6.02□□□□□ -1.44
UBP9YER098W THS1P04801 734 aaKnown RBP6.02□□□□□ -1.45
UBP9YER098W FUS1P11710 512 aa6.02□□□□□ -1.45
UBP9YER098W TOP3P13099 656 aa6.02□□□□□ -1.45
UBP9YER098W DAL1P32375 460 aa6.02□□□□□ -1.45
UBP9YER098W PIN4P34217 668 aaKnown RBP RIP-Chip data6.02□□□□□ -1.45not detected
UBP9YER098W AMN1P38285 549 aaPredicted RBP6.02□□□□□ -1.45
UBP9YER098W EXO5P38289 585 aa6.02□□□□□ -1.45
UBP9YER098W CLA4P48562 842 aa6.02□□□□□ -1.45
UBP9YER098W GPG1P53130 126 aa6.02□□□□□ -1.45
UBP9YER098W CEF1Q03654 590 aaPredicted RBP6.02□□□□□ -1.45
UBP9YER098W GIN4Q12263 1142 aa6.02□□□□□ -1.45
UBP9YER098W TMA7Q3E764 64 aaKnown RBP6.02□□□□□ -1.45
UBP9YER098W ESC1Q03661 1658 aaKnown RBP6.02□□□□□ -1.45
UBP9YER098W TRX2P22803 104 aaKnown RBP6.01□□□□□ -1.45
UBP9YER098W DSS1P39112 969 aa6.01□□□□□ -1.45
UBP9YER098W RAT1Q02792 1006 aaKnown RBP6.01□□□□□ -1.45
UBP9YER098W AOS1Q06624 347 aa6.01□□□□□ -1.45
UBP9YER098W GLO4Q12320 285 aa6.01□□□□□ -1.45
UBP9YER098W TOM70P07213 617 aaKnown RBP6.01□□□□□ -1.45
UBP9YER098W VMA4P22203 233 aaKnown RBP6.01□□□□□ -1.45
UBP9YER098W SYP1P25623 870 aaKnown RBP6.01□□□□□ -1.45
UBP9YER098W HBS1P32769 611 aaKnown RBP6.01□□□□□ -1.45
UBP9YER098W PAN5P38787 379 aa6.01□□□□□ -1.45
UBP9YER098W SMC3P47037 1230 aa6.01□□□□□ -1.45
UBP9YER098W FAP7Q12055 197 aaPredicted RBP6.01□□□□□ -1.45
UBP9YER098W GEA2P39993 1459 aaKnown RBP6.01□□□□□ -1.45
UBP9YER098W MCM7P38132 845 aa6□□□□□ -1.45
UBP9YER098W DAS1P47005 663 aa6□□□□□ -1.45
UBP9YER098W MSB3P48566 633 aaPredicted RBP6□□□□□ -1.45
UBP9YER098W SDA1P53313 767 aaKnown RBP6□□□□□ -1.45
UBP9YER098W EST2Q06163 884 aa6□□□□□ -1.45
UBP9YER098W YBR284WP38150 797 aa6□□□□□ -1.45
UBP9YER098W NYV1Q12255 253 aa6□□□□□ -1.45
UBP9YER098W ATG2P53855 1592 aa5.99□□□□□ -1.45
UBP9YER098W SCP160P06105 1222 aaKnown RBP RIP-Chip data5.99□□□□□ -1.45not detected
UBP9YER098W TY1A-LR4P0C2I8 440 aaKnown RBP5.99□□□□□ -1.45
UBP9YER098W TY1A-DR6P0CX70 440 aa5.99□□□□□ -1.45
UBP9YER098W TY1A-ER1P0CX71 440 aa5.99□□□□□ -1.45
UBP9YER098W TY1A-LR2P0CX72 440 aa5.99□□□□□ -1.45
UBP9YER098W TY1A-PLP0CX73 440 aa5.99□□□□□ -1.45
UBP9YER098W TY1A-JR1P0CX74 440 aa5.99□□□□□ -1.45
UBP9YER098W TY1A-LR3P0CX75 440 aa5.99□□□□□ -1.45
UBP9YER098W TY1A-ML2P0CX76 440 aa5.99□□□□□ -1.45
UBP9YER098W SPC110P32380 944 aa5.99□□□□□ -1.45
UBP9YER098W YER156CP40093 338 aaKnown RBP5.99□□□□□ -1.45
UBP9YER098W YJL181WP46987 611 aa5.99□□□□□ -1.45
UBP9YER098W YDL144CQ07589 356 aa5.99□□□□□ -1.45
UBP9YER098W YLR001CQ07895 862 aa5.99□□□□□ -1.45
UBP9YER098W TY1A-GR1Q12085 440 aa5.99□□□□□ -1.45
UBP9YER098W TY1A-PR3Q6Q5H1 440 aaKnown RBP5.99□□□□□ -1.45
UBP9YER098W MDM12Q92328 271 aa5.99□□□□□ -1.45
UBP9YER098W TY1A-OLQ92392 440 aaKnown RBP5.99□□□□□ -1.45
UBP9YER098W IDI1P15496 288 aa5.99□□□□□ -1.45
UBP9YER098W YKL077WP36081 392 aa5.99□□□□□ -1.45
UBP9YER098W NCL1P38205 684 aaKnown RBP5.99□□□□□ -1.45
UBP9YER098W VTC4P47075 721 aa5.99□□□□□ -1.45
UBP9YER098W TY1B-DR3Q99231 1755 aa5.98□□□□□ -1.45
UBP9YER098W DBP5P20449 482 aaKnown RBP5.98□□□□□ -1.45
UBP9YER098W SEC26P41810 973 aaKnown RBP5.98□□□□□ -1.45
UBP9YER098W CNN1P43618 361 aa5.98□□□□□ -1.45
UBP9YER098W COG6P53959 839 aa5.98□□□□□ -1.45
UBP9YER098W PDR5P33302 1511 aaKnown RBP5.98□□□□□ -1.45
UBP9YER098W RPP0P05317 312 aaKnown RBP5.97□□□□□ -1.45
UBP9YER098W SUI2P20459 304 aaKnown RBP5.97□□□□□ -1.45
UBP9YER098W VBA3P25594 458 aa5.97□□□□□ -1.45
UBP9YER098W HIR1P32479 840 aa5.97□□□□□ -1.45
UBP9YER098W VRP1P37370 817 aa5.97□□□□□ -1.45
UBP9YER098W RIX1P38883 763 aaPredicted RBP5.97□□□□□ -1.45
UBP9YER098W HVG1P0CE11 249 aa5.97□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms