RNA–Protein interactions for RNA: YDR528W

HLR1, Transcript of Protein involved in regulation of cell wall composition and integrity, yeast

Gene HLR1, Length 1,272 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HLR1	YDR528W	ATG14	P38270	344 aa		4.69	□□□□□ -1.66
HLR1	YDR528W	HSE1	P38753	452 aa		4.69	□□□□□ -1.66
HLR1	YDR528W	LAP2	Q10740	671 aa		4.69	□□□□□ -1.66
HLR1	YDR528W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.68	□□□□□ -1.66	not detected
HLR1	YDR528W	YJL045W	P47052	634 aa		4.68	□□□□□ -1.66
HLR1	YDR528W	RKM2	Q03942	479 aa		4.68	□□□□□ -1.66
HLR1	YDR528W	JIP5	Q06214	492 aa	Predicted RBP	4.68	□□□□□ -1.66
HLR1	YDR528W	HRK1	Q08732	759 aa	Known RBP	4.68	□□□□□ -1.66
HLR1	YDR528W	AFG2	P32794	780 aa		4.67	□□□□□ -1.66
HLR1	YDR528W	QNS1	P38795	714 aa	Known RBP	4.67	□□□□□ -1.66
HLR1	YDR528W	MAD1	P40957	749 aa		4.67	□□□□□ -1.66
HLR1	YDR528W	EST2	Q06163	884 aa		4.67	□□□□□ -1.66
HLR1	YDR528W	TAD3	Q9URQ3	322 aa		4.67	□□□□□ -1.66
HLR1	YDR528W	DED1	P06634	604 aa	Known RBP	4.66	□□□□□ -1.66
HLR1	YDR528W	ENT3	P47160	408 aa		4.66	□□□□□ -1.66
HLR1	YDR528W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.66	□□□□□ -1.66	not detected
HLR1	YDR528W	YDR132C	Q03900	495 aa		4.66	□□□□□ -1.66
HLR1	YDR528W	PNS1	Q12412	539 aa		4.66	□□□□□ -1.66
HLR1	YDR528W	VPS53	P47061	822 aa		4.65	□□□□□ -1.67
HLR1	YDR528W	SRO9	P25567	434 aa	Known RBP	4.64	□□□□□ -1.67
HLR1	YDR528W	RAD27	P26793	382 aa		4.64	□□□□□ -1.67
HLR1	YDR528W	SPT20	P50875	604 aa		4.64	□□□□□ -1.67
HLR1	YDR528W	MRL1	Q06815	381 aa		4.64	□□□□□ -1.67
HLR1	YDR528W	TMA46	Q12000	345 aa	Known RBP	4.64	□□□□□ -1.67
HLR1	YDR528W	PIN2	Q12057	282 aa		4.64	□□□□□ -1.67
HLR1	YDR528W	TAT2	P38967	592 aa		4.63	□□□□□ -1.67
HLR1	YDR528W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	RIP-Chip
HLR1	YDR528W	SIW14	P53965	281 aa		4.63	□□□□□ -1.67
HLR1	YDR528W	VPS16	Q03308	798 aa		4.63	□□□□□ -1.67
HLR1	YDR528W	RSC58	Q07979	502 aa		4.63	□□□□□ -1.67
HLR1	YDR528W	RTT10	Q08924	1013 aa		4.63	□□□□□ -1.67
HLR1	YDR528W	PTC5	Q12511	572 aa		4.63	□□□□□ -1.67
HLR1	YDR528W	GCR1	P07261	785 aa		4.62	□□□□□ -1.67
HLR1	YDR528W	SPS1	P08458	490 aa		4.62	□□□□□ -1.67
HLR1	YDR528W	CDC34	P14682	295 aa		4.62	□□□□□ -1.67
HLR1	YDR528W	KIP1	P28742	1111 aa		4.62	□□□□□ -1.67
HLR1	YDR528W	YSC84	P32793	468 aa		4.62	□□□□□ -1.67
HLR1	YDR528W	ALG3	P38179	458 aa		4.62	□□□□□ -1.67
HLR1	YDR528W	GPB2	P39717	880 aa		4.62	□□□□□ -1.67
HLR1	YDR528W	GNP1	P48813	663 aa		4.62	□□□□□ -1.67
HLR1	YDR528W	RAT1	Q02792	1006 aa	Known RBP	4.62	□□□□□ -1.67
HLR1	YDR528W	ROD1	Q02805	837 aa		4.62	□□□□□ -1.67
HLR1	YDR528W	LAM1	P38851	1228 aa		4.61	□□□□□ -1.67
HLR1	YDR528W	CWC24	P53769	259 aa		4.61	□□□□□ -1.67
HLR1	YDR528W	GCN5	Q03330	439 aa		4.61	□□□□□ -1.67
HLR1	YDR528W	SGD1	Q06132	899 aa		4.61	□□□□□ -1.67
HLR1	YDR528W	RCL1	Q08096	367 aa	Predicted RBP	4.61	□□□□□ -1.67
HLR1	YDR528W	YOR352W	Q08816	343 aa		4.61	□□□□□ -1.67
HLR1	YDR528W	MKK2	P32491	506 aa		4.6	□□□□□ -1.67
HLR1	YDR528W	MEF2	P39677	819 aa		4.6	□□□□□ -1.67
HLR1	YDR528W	HXT13	P39924	564 aa		4.6	□□□□□ -1.67
HLR1	YDR528W	HXT17	P53631	564 aa		4.6	□□□□□ -1.67
HLR1	YDR528W	HXT15	P54854	567 aa		4.6	□□□□□ -1.67
HLR1	YDR528W	KRI1	P42846	591 aa	Known RBP	4.59	□□□□□ -1.67
HLR1	YDR528W	ROT1	Q03691	256 aa		4.59	□□□□□ -1.67
HLR1	YDR528W	COQ4	O13525	335 aa		4.58	□□□□□ -1.68
HLR1	YDR528W	CYC1	P00044	109 aa	Predicted RBP	4.58	□□□□□ -1.68
HLR1	YDR528W	DUT1	P33317	147 aa		4.58	□□□□□ -1.68
HLR1	YDR528W	VAC8	P39968	578 aa		4.58	□□□□□ -1.68
HLR1	YDR528W	ALD6	P54115	500 aa	Known RBP	4.58	□□□□□ -1.68
HLR1	YDR528W	GDE1	Q02979	1223 aa		4.58	□□□□□ -1.68
HLR1	YDR528W	NBA1	Q08229	501 aa	Known RBP	4.58	□□□□□ -1.68
HLR1	YDR528W	PUS9	Q12069	462 aa		4.58	□□□□□ -1.68
HLR1	YDR528W	SPO21	Q12411	609 aa		4.58	□□□□□ -1.68
HLR1	YDR528W	SNF5	P18480	905 aa		4.57	□□□□□ -1.68
HLR1	YDR528W	BAP2	P38084	609 aa		4.57	□□□□□ -1.68
HLR1	YDR528W	CCZ1	P38273	704 aa		4.57	□□□□□ -1.68
HLR1	YDR528W	TNA1	P53322	534 aa		4.57	□□□□□ -1.68
HLR1	YDR528W	HOS3	Q02959	697 aa	Known RBP	4.57	□□□□□ -1.68
HLR1	YDR528W	YPL260W	Q08977	551 aa		4.57	□□□□□ -1.68
HLR1	YDR528W	SYP1	P25623	870 aa	Known RBP	4.56	□□□□□ -1.68
HLR1	YDR528W	LYP1	P32487	611 aa		4.56	□□□□□ -1.68
HLR1	YDR528W	TRM2	P33753	639 aa		4.56	□□□□□ -1.68
HLR1	YDR528W	FAA4	P47912	694 aa	Known RBP	4.56	□□□□□ -1.68
HLR1	YDR528W	YGR053C	P53234	283 aa		4.56	□□□□□ -1.68
HLR1	YDR528W	ENV11	P53246	860 aa		4.56	□□□□□ -1.68
HLR1	YDR528W	SLI1	P53304	468 aa		4.56	□□□□□ -1.68
HLR1	YDR528W	PLB2	Q03674	706 aa		4.56	□□□□□ -1.68
HLR1	YDR528W	SPO20	Q04359	397 aa		4.56	□□□□□ -1.68
HLR1	YDR528W	AIM44	Q99299	758 aa		4.56	□□□□□ -1.68
HLR1	YDR528W	TRP2	P00899	507 aa	Known RBP	4.55	□□□□□ -1.68
HLR1	YDR528W	DBP5	P20449	482 aa	Known RBP	4.55	□□□□□ -1.68
HLR1	YDR528W	RER2	P35196	286 aa		4.55	□□□□□ -1.68
HLR1	YDR528W	YPT53	P36019	220 aa		4.55	□□□□□ -1.68
HLR1	YDR528W	RGD1	P38339	666 aa		4.55	□□□□□ -1.68
HLR1	YDR528W	PIK1	P39104	1066 aa		4.55	□□□□□ -1.68
HLR1	YDR528W	SNF7	P39929	240 aa	Known RBP	4.55	□□□□□ -1.68
HLR1	YDR528W	RPN3	P40016	523 aa	Known RBP	4.55	□□□□□ -1.68
HLR1	YDR528W	YFL054C	P43549	646 aa		4.55	□□□□□ -1.68
HLR1	YDR528W	CNN1	P43618	361 aa		4.55	□□□□□ -1.68
HLR1	YDR528W	TYW3	P53177	273 aa		4.55	□□□□□ -1.68
HLR1	YDR528W	EEB1	Q02891	456 aa		4.55	□□□□□ -1.68
HLR1	YDR528W	DUS4	Q06063	367 aa		4.55	□□□□□ -1.68
HLR1	YDR528W	WRS1	Q12109	432 aa	Known RBP	4.55	□□□□□ -1.68
HLR1	YDR528W	MLS1	P30952	554 aa		4.54	□□□□□ -1.68
HLR1	YDR528W	NNF1	P47149	201 aa		4.54	□□□□□ -1.68
HLR1	YDR528W	MSE1	P48525	536 aa		4.54	□□□□□ -1.68
HLR1	YDR528W	HNT2	P49775	206 aa		4.54	□□□□□ -1.68
HLR1	YDR528W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	not detected
HLR1	YDR528W	FAL1	Q12099	399 aa	Known RBP	4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 70.5 ms