RNA–Protein interactions for RNA: YDR332W

IRC3, Transcript of Putative RNA helicase of the DEAH/D-box family, yeast

Gene IRC3, Length 2,070 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IRC3	YDR332W	YDL124W	Q07551	312 aa	Known RBP	4.17	□□□□□ -1.74
IRC3	YDR332W	YDR461C-A	Q2V2P7	80 aa		4.17	□□□□□ -1.74
IRC3	YDR332W	DPS1	P04802	557 aa	Known RBP	4.16	□□□□□ -1.74
IRC3	YDR332W	FPS1	P23900	669 aa		4.16	□□□□□ -1.74
IRC3	YDR332W	SWE1	P32944	819 aa		4.16	□□□□□ -1.74
IRC3	YDR332W	AFR1	P33304	620 aa		4.16	□□□□□ -1.74
IRC3	YDR332W	PMC1	P38929	1173 aa	Predicted RBP	4.16	□□□□□ -1.74
IRC3	YDR332W	TPM2	P40414	161 aa		4.16	□□□□□ -1.74
IRC3	YDR332W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
IRC3	YDR332W	ADE12	P80210	433 aa	Known RBP	4.16	□□□□□ -1.74
IRC3	YDR332W	YMR265C	Q03508	461 aa	Known RBP	4.16	□□□□□ -1.74
IRC3	YDR332W	SPO71	Q03868	1245 aa		4.16	□□□□□ -1.74
IRC3	YDR332W	RGD1	P38339	666 aa		4.15	□□□□□ -1.74
IRC3	YDR332W	PNT1	P38969	423 aa		4.15	□□□□□ -1.74
IRC3	YDR332W	UBP6	P43593	499 aa	Known RBP	4.15	□□□□□ -1.74
IRC3	YDR332W	ROG3	P43602	733 aa		4.15	□□□□□ -1.74
IRC3	YDR332W	YJR120W	P47157	116 aa		4.15	□□□□□ -1.74
IRC3	YDR332W	PEX8	P53248	589 aa		4.15	□□□□□ -1.74
IRC3	YDR332W	GIC2	Q06648	383 aa		4.15	□□□□□ -1.74
IRC3	YDR332W	SYT1	Q06836	1226 aa		4.15	□□□□□ -1.74
IRC3	YDR332W	YER152C	P10356	443 aa		4.15	□□□□□ -1.75
IRC3	YDR332W	MSD1	P15179	658 aa	Known RBP	4.15	□□□□□ -1.75
IRC3	YDR332W	MRC1	P25588	1096 aa		4.15	□□□□□ -1.75
IRC3	YDR332W	GIP2	P40036	548 aa		4.15	□□□□□ -1.75
IRC3	YDR332W	LEM3	P42838	414 aa		4.15	□□□□□ -1.75
IRC3	YDR332W	TY4A-J	P47023	414 aa		4.15	□□□□□ -1.75
IRC3	YDR332W	LYS5	P50113	272 aa		4.15	□□□□□ -1.75
IRC3	YDR332W	SCW11	P53189	542 aa		4.15	□□□□□ -1.75
IRC3	YDR332W	NCE103	P53615	221 aa		4.15	□□□□□ -1.75
IRC3	YDR332W	YLR346C	Q06139	101 aa		4.15	□□□□□ -1.75
IRC3	YDR332W	GNT1	Q12096	491 aa		4.15	□□□□□ -1.75
IRC3	YDR332W	YPR071W	Q12346	211 aa		4.15	□□□□□ -1.75
IRC3	YDR332W	PTC5	Q12511	572 aa		4.15	□□□□□ -1.75
IRC3	YDR332W	SFP1	P32432	683 aa		4.14	□□□□□ -1.75
IRC3	YDR332W	PET10	P36139	283 aa		4.14	□□□□□ -1.75
IRC3	YDR332W	REI1	P38344	393 aa	Predicted RBP	4.14	□□□□□ -1.75
IRC3	YDR332W	SIT1	P39980	628 aa		4.14	□□□□□ -1.75
IRC3	YDR332W	GCV1	P48015	400 aa		4.14	□□□□□ -1.75
IRC3	YDR332W	HNT2	P49775	206 aa		4.14	□□□□□ -1.75
IRC3	YDR332W	YGR237C	P50089	785 aa		4.14	□□□□□ -1.75
IRC3	YDR332W	YGR045C	P53229	120 aa		4.14	□□□□□ -1.75
IRC3	YDR332W	THI73	Q07904	523 aa		4.14	□□□□□ -1.75
IRC3	YDR332W	ALG6	Q12001	544 aa	Known RBP	4.14	□□□□□ -1.75
IRC3	YDR332W	TMA17	Q12513	150 aa		4.14	□□□□□ -1.75
IRC3	YDR332W	YKL151C	P36059	337 aa		4.14	□□□□□ -1.75
IRC3	YDR332W	YDR306C	Q06640	478 aa		4.14	□□□□□ -1.75
IRC3	YDR332W	RPL11A	P0C0W9	174 aa	Known RBP	4.13	□□□□□ -1.75
IRC3	YDR332W	ERS1	P17261	260 aa		4.13	□□□□□ -1.75
IRC3	YDR332W	NAR1	P23503	491 aa	Known RBP	4.13	□□□□□ -1.75
IRC3	YDR332W	CDC11	P32458	415 aa		4.13	□□□□□ -1.75
IRC3	YDR332W	ERT1	P38140	529 aa		4.13	□□□□□ -1.75
IRC3	YDR332W	MXR1	P40029	184 aa		4.13	□□□□□ -1.75
IRC3	YDR332W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
IRC3	YDR332W	HLJ1	P48353	224 aa		4.13	□□□□□ -1.75
IRC3	YDR332W	SRC1	Q03707	834 aa		4.13	□□□□□ -1.75
IRC3	YDR332W	RPL11B	Q3E757	174 aa	Predicted RBP	4.13	□□□□□ -1.75
IRC3	YDR332W	TOM70	P07213	617 aa	Known RBP	4.12	□□□□□ -1.75
IRC3	YDR332W	TRK1	P12685	1235 aa		4.12	□□□□□ -1.75
IRC3	YDR332W	VBA3	P25594	458 aa		4.12	□□□□□ -1.75
IRC3	YDR332W	DOM34	P33309	386 aa		4.12	□□□□□ -1.75
IRC3	YDR332W	GRX7	P38068	203 aa		4.12	□□□□□ -1.75
IRC3	YDR332W	YAR028W	P39548	234 aa		4.12	□□□□□ -1.75
IRC3	YDR332W	GEM1	P39722	662 aa		4.12	□□□□□ -1.75
IRC3	YDR332W	TY4B-P	A0A0B7P3V8	1104 aa		4.12	□□□□□ -1.75
IRC3	YDR332W	CDC9	P04819	755 aa		4.12	□□□□□ -1.75
IRC3	YDR332W	QNS1	P38795	714 aa	Known RBP	4.12	□□□□□ -1.75
IRC3	YDR332W	MGS1	P40151	587 aa		4.12	□□□□□ -1.75
IRC3	YDR332W	TED1	P40533	473 aa		4.12	□□□□□ -1.75
IRC3	YDR332W	TY4A-H	Q6Q5P6	413 aa		4.12	□□□□□ -1.75
IRC3	YDR332W	RAD53	P22216	821 aa		4.11	□□□□□ -1.75
IRC3	YDR332W	NPP1	P25353	742 aa		4.11	□□□□□ -1.75
IRC3	YDR332W	KIP1	P28742	1111 aa		4.11	□□□□□ -1.75
IRC3	YDR332W	SEC6	P32844	805 aa		4.11	□□□□□ -1.75
IRC3	YDR332W	SNF7	P39929	240 aa	Known RBP	4.11	□□□□□ -1.75
IRC3	YDR332W	PMT3	P47190	753 aa		4.11	□□□□□ -1.75
IRC3	YDR332W	TGL2	P54857	326 aa		4.11	□□□□□ -1.75
IRC3	YDR332W	UME1	Q03010	460 aa		4.11	□□□□□ -1.75
IRC3	YDR332W	GIS4	Q04233	774 aa		4.11	□□□□□ -1.75
IRC3	YDR332W	PDC5	P16467	563 aa	Known RBP	4.1	□□□□□ -1.75
IRC3	YDR332W	PCL2	P25693	308 aa		4.1	□□□□□ -1.75
IRC3	YDR332W	AAR2	P32357	355 aa	Predicted RBP	4.1	□□□□□ -1.75
IRC3	YDR332W	DSS1	P39112	969 aa		4.1	□□□□□ -1.75
IRC3	YDR332W	NOP2	P40991	618 aa	Known RBP	4.1	□□□□□ -1.75
IRC3	YDR332W	GPP1	P41277	250 aa	Known RBP	4.1	□□□□□ -1.75
IRC3	YDR332W	BRE2	P43132	505 aa		4.1	□□□□□ -1.75
IRC3	YDR332W	YFL054C	P43549	646 aa		4.1	□□□□□ -1.75
IRC3	YDR332W	MET13	P53128	600 aa		4.1	□□□□□ -1.75
IRC3	YDR332W	ALO1	P54783	526 aa	Known RBP	4.1	□□□□□ -1.75
IRC3	YDR332W	DUS3	Q06053	668 aa	Known RBP	4.1	□□□□□ -1.75
IRC3	YDR332W	SPP382	Q06411	708 aa	Predicted RBP	4.1	□□□□□ -1.75
IRC3	YDR332W	YOR378W	Q08902	515 aa		4.1	□□□□□ -1.75
IRC3	YDR332W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
IRC3	YDR332W	RET1	P22276	1149 aa	Known RBP	4.1	□□□□□ -1.75
IRC3	YDR332W	ALG2	P43636	503 aa		4.1	□□□□□ -1.75
IRC3	YDR332W	VPS53	P47061	822 aa		4.1	□□□□□ -1.75
IRC3	YDR332W	COG6	P53959	839 aa		4.1	□□□□□ -1.75
IRC3	YDR332W	RSA3	Q05942	220 aa	Known RBP	4.1	□□□□□ -1.75
IRC3	YDR332W	ELG1	Q12050	791 aa		4.1	□□□□□ -1.75
IRC3	YDR332W	GPM1	P00950	247 aa	Known RBP	4.09	□□□□□ -1.75
IRC3	YDR332W	SRD1	P09007	221 aa		4.09	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms