RNA–Protein interactions for RNA: YDR233C

RTN1, Transcript of Reticulon protein, yeastyeast

Gene RTN1, Length 888 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTN1YDR233C CIT2P08679 460 aa7.16□□□□□ -1.26
RTN1YDR233C RPS4AP0CX35 261 aaKnown RBP7.16□□□□□ -1.26
RTN1YDR233C RPS4BP0CX36 261 aaKnown RBP7.16□□□□□ -1.26
RTN1YDR233C NAM7P30771 971 aaKnown RBP7.16□□□□□ -1.26
RTN1YDR233C KRI1P42846 591 aaKnown RBP7.16□□□□□ -1.26
RTN1YDR233C YJL045WP47052 634 aa7.16□□□□□ -1.26
RTN1YDR233C FMP25Q08023 583 aa7.16□□□□□ -1.26
RTN1YDR233C YPL260WQ08977 551 aa7.16□□□□□ -1.26
RTN1YDR233C AIM44Q99299 758 aa7.16□□□□□ -1.26
RTN1YDR233C PIN4P34217 668 aaKnown RBP RIP-Chip data7.15□□□□□ -1.26not detected
RTN1YDR233C PBP2P38151 413 aaKnown RBP RIP-Chip data7.15□□□□□ -1.26not detected
RTN1YDR233C SKN7P38889 622 aa7.15□□□□□ -1.26
RTN1YDR233C AKR1P39010 764 aa7.15□□□□□ -1.26
RTN1YDR233C IRR1P40541 1150 aa7.15□□□□□ -1.26
RTN1YDR233C BUD6P41697 788 aa7.15□□□□□ -1.26
RTN1YDR233C GIC2Q06648 383 aa7.15□□□□□ -1.26
RTN1YDR233C PPM2Q08282 695 aa7.15□□□□□ -1.26
RTN1YDR233C PUS7Q08647 676 aaKnown RBP7.15□□□□□ -1.26
RTN1YDR233C SPO21Q12411 609 aa7.15□□□□□ -1.26
RTN1YDR233C PGM1P33401 570 aaKnown RBP7.14□□□□□ -1.27
RTN1YDR233C MCA1Q08601 432 aa7.14□□□□□ -1.27
RTN1YDR233C HRK1Q08732 759 aaKnown RBP7.14□□□□□ -1.27
RTN1YDR233C SBP1P10080 294 aaKnown RBP7.13□□□□□ -1.27
RTN1YDR233C RPL8BP29453 256 aaKnown RBP7.13□□□□□ -1.27
RTN1YDR233C PBY1P38254 753 aa7.13□□□□□ -1.27
RTN1YDR233C TPP1Q03796 238 aa7.13□□□□□ -1.27
RTN1YDR233C DBP2P24783 546 aaKnown RBP7.12□□□□□ -1.27
RTN1YDR233C TAT1P38085 619 aa7.12□□□□□ -1.27
RTN1YDR233C PNT1P38969 423 aa7.12□□□□□ -1.27
RTN1YDR233C PUF3Q07807 879 aaKnown RBP RIP-Chip data7.12□□□□□ -1.27not detected
RTN1YDR233C FLC1Q08967 793 aa7.12□□□□□ -1.27
RTN1YDR233C WHI3P34761 661 aaKnown RBP7.11□□□□□ -1.27
RTN1YDR233C ICP55P40051 511 aa7.11□□□□□ -1.27
RTN1YDR233C YFL054CP43549 646 aa7.11□□□□□ -1.27
RTN1YDR233C RPL11AP0C0W9 174 aaKnown RBP7.1□□□□□ -1.27
RTN1YDR233C RPN3P40016 523 aaKnown RBP7.1□□□□□ -1.27
RTN1YDR233C YGR125WP53273 1036 aa7.1□□□□□ -1.27
RTN1YDR233C SPP382Q06411 708 aaPredicted RBP7.1□□□□□ -1.27
RTN1YDR233C SPO75Q07798 868 aa7.1□□□□□ -1.27
RTN1YDR233C YVC1Q12324 675 aa7.1□□□□□ -1.27
RTN1YDR233C YOR131CQ12486 218 aa7.1□□□□□ -1.27
RTN1YDR233C RPL11BQ3E757 174 aaPredicted RBP7.1□□□□□ -1.27
RTN1YDR233C YSC84P32793 468 aa7.09□□□□□ -1.27
RTN1YDR233C RSP5P39940 809 aaKnown RBP7.09□□□□□ -1.27
RTN1YDR233C MXR1P40029 184 aa7.09□□□□□ -1.27
RTN1YDR233C RNH70P53331 553 aa7.09□□□□□ -1.27
RTN1YDR233C CIT1P00890 479 aa7.08□□□□□ -1.28
RTN1YDR233C SNF5P18480 905 aa7.08□□□□□ -1.28
RTN1YDR233C SAF1P38352 637 aa7.08□□□□□ -1.28
RTN1YDR233C MMM1P41800 426 aa7.08□□□□□ -1.28
RTN1YDR233C UTP8P53276 713 aaKnown RBP7.08□□□□□ -1.28
RTN1YDR233C UBX5Q06682 500 aa7.08□□□□□ -1.28
RTN1YDR233C RCL1Q08096 367 aaPredicted RBP7.08□□□□□ -1.28
RTN1YDR233C OSH2Q12451 1283 aa7.08□□□□□ -1.28
RTN1YDR233C SAM35P14693 329 aa7.07□□□□□ -1.28
RTN1YDR233C HSP60P19882 572 aaKnown RBP7.07□□□□□ -1.28
RTN1YDR233C HBS1P32769 611 aaKnown RBP7.07□□□□□ -1.28
RTN1YDR233C TIM23P32897 222 aa7.07□□□□□ -1.28
RTN1YDR233C SNF7P39929 240 aaKnown RBP7.07□□□□□ -1.28
RTN1YDR233C ALR2P43553 858 aa7.07□□□□□ -1.28
RTN1YDR233C ERP6P53198 216 aa7.07□□□□□ -1.28
RTN1YDR233C YPL034WQ03083 165 aa7.07□□□□□ -1.28
RTN1YDR233C EAF1Q06337 982 aa7.07□□□□□ -1.28
RTN1YDR233C CIT3P43635 486 aa7.06□□□□□ -1.28
RTN1YDR233C GUS1P46655 708 aaKnown RBP RIP-Chip data7.06□□□□□ -1.28not detected
RTN1YDR233C HOS3Q02959 697 aaKnown RBP7.06□□□□□ -1.28
RTN1YDR233C YLR122CQ12312 125 aa7.06□□□□□ -1.28
RTN1YDR233C PRP9P19736 530 aaKnown RBP7.05□□□□□ -1.28
RTN1YDR233C ARE1P25628 610 aa7.05□□□□□ -1.28
RTN1YDR233C SLA2P33338 968 aa7.05□□□□□ -1.28
RTN1YDR233C BAP2P38084 609 aa7.05□□□□□ -1.28
RTN1YDR233C RTA1P53047 317 aa7.05□□□□□ -1.28
RTN1YDR233C TNA1P53322 534 aa7.05□□□□□ -1.28
RTN1YDR233C TAF8Q03750 510 aa7.05□□□□□ -1.28
RTN1YDR233C PUS1Q12211 544 aaKnown RBP7.05□□□□□ -1.28
RTN1YDR233C CAN1P04817 590 aa7.04□□□□□ -1.28
RTN1YDR233C COQ2P32378 372 aa7.04□□□□□ -1.28
RTN1YDR233C YHL012WP38709 493 aa7.04□□□□□ -1.28
RTN1YDR233C NMD2P38798 1089 aaKnown RBP7.04□□□□□ -1.28
RTN1YDR233C NUP82P40368 713 aa7.04□□□□□ -1.28
RTN1YDR233C OYE3P41816 400 aaPredicted RBP7.04□□□□□ -1.28
RTN1YDR233C ALG12P53730 551 aa7.04□□□□□ -1.28
RTN1YDR233C ERR1P0CX10 437 aa7.03□□□□□ -1.28
RTN1YDR233C ERR2P0CX11 437 aa7.03□□□□□ -1.28
RTN1YDR233C GAL11P19659 1081 aa7.03□□□□□ -1.28
RTN1YDR233C YKL151CP36059 337 aa7.03□□□□□ -1.28
RTN1YDR233C OSW7P43611 510 aa7.03□□□□□ -1.28
RTN1YDR233C RCM1P53972 490 aa7.03□□□□□ -1.28
RTN1YDR233C ACM1Q08981 209 aa7.03□□□□□ -1.28
RTN1YDR233C BET3P36149 193 aa7.02□□□□□ -1.29
RTN1YDR233C PEX7P39108 375 aa7.02□□□□□ -1.29
RTN1YDR233C CCT8P47079 568 aaKnown RBP7.02□□□□□ -1.29
RTN1YDR233C HRQ1Q05549 1077 aa7.02□□□□□ -1.29
RTN1YDR233C YDR306CQ06640 478 aa7.02□□□□□ -1.29
RTN1YDR233C COQ4O13525 335 aa7.01□□□□□ -1.29
RTN1YDR233C MSB1P21339 1137 aaKnown RBP7.01□□□□□ -1.29
RTN1YDR233C UGA2P38067 497 aa7.01□□□□□ -1.29
RTN1YDR233C CHZ1P40019 153 aaPredicted RBP7.01□□□□□ -1.29
RTN1YDR233C NPL3Q01560 414 aaKnown RBP RIP-Chip data7.01□□□□□ -1.29not detected
RTN1YDR233C DUS3Q06053 668 aaKnown RBP7.01□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms