RNA–Protein interactions for RNA: YDR049W

VMS1, Transcript of Component of a Cdc48p-complex involved in protein quality control, yeastyeast

Gene VMS1, Length 1,899 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMS1YDR049W YML6P51998 286 aa6.43□□□□□ -1.38
VMS1YDR049W MEP3P53390 489 aa6.43□□□□□ -1.38
VMS1YDR049W YNL115CP53925 644 aa6.43□□□□□ -1.38
VMS1YDR049W VTC3Q02725 835 aa6.43□□□□□ -1.38
VMS1YDR049W PGS1P25578 521 aa6.42□□□□□ -1.38
VMS1YDR049W BET3P36149 193 aa6.42□□□□□ -1.38
VMS1YDR049W ACA1P39970 489 aa6.42□□□□□ -1.38
VMS1YDR049W AIM9P40053 627 aaKnown RBP6.42□□□□□ -1.38
VMS1YDR049W IRR1P40541 1150 aa6.42□□□□□ -1.38
VMS1YDR049W CWH41P53008 833 aa6.42□□□□□ -1.38
VMS1YDR049W PUS6P53294 404 aa6.42□□□□□ -1.38
VMS1YDR049W YMR018WQ04364 514 aa6.42□□□□□ -1.38
VMS1YDR049W RNH1Q04740 348 aa6.42□□□□□ -1.38
VMS1YDR049W YPR097WQ06839 1073 aa6.42□□□□□ -1.38
VMS1YDR049W MRP7P12687 371 aa6.41□□□□□ -1.38
VMS1YDR049W KAR2P16474 682 aaKnown RBP6.41□□□□□ -1.38
VMS1YDR049W GLK1P17709 500 aaKnown RBP6.41□□□□□ -1.38
VMS1YDR049W ISC10P32645 267 aa6.41□□□□□ -1.38
VMS1YDR049W YBR197CP38306 217 aa6.41□□□□□ -1.38
VMS1YDR049W VPS41P38959 992 aa6.41□□□□□ -1.38
VMS1YDR049W HIS6P40545 261 aa6.41□□□□□ -1.38
VMS1YDR049W RSC4Q02206 625 aa6.41□□□□□ -1.38
VMS1YDR049W HAP5Q02516 242 aa6.41□□□□□ -1.38
VMS1YDR049W YLH47Q06493 454 aa6.41□□□□□ -1.38
VMS1YDR049W TUF1P02992 437 aaKnown RBP6.41□□□□□ -1.38
VMS1YDR049W RAD16P31244 790 aa6.41□□□□□ -1.38
VMS1YDR049W SCT1P32784 759 aa6.41□□□□□ -1.38
VMS1YDR049W GDH3P39708 457 aa6.41□□□□□ -1.38
VMS1YDR049W JEM1P40358 645 aa6.41□□□□□ -1.38
VMS1YDR049W RET2P43621 546 aa6.41□□□□□ -1.38
VMS1YDR049W TAN1P53072 289 aaPredicted RBP6.41□□□□□ -1.38
VMS1YDR049W NPY1P53164 384 aa6.41□□□□□ -1.38
VMS1YDR049W TRS130Q03660 1102 aa6.41□□□□□ -1.38
VMS1YDR049W DAL4Q04895 635 aa6.41□□□□□ -1.38
VMS1YDR049W ESC8Q08119 714 aa6.41□□□□□ -1.38
VMS1YDR049W RTT10Q08924 1013 aa6.41□□□□□ -1.38
VMS1YDR049W SPO21Q12411 609 aa6.41□□□□□ -1.38
VMS1YDR049W SBP1P10080 294 aaKnown RBP6.4□□□□□ -1.39
VMS1YDR049W FUR1P18562 216 aaKnown RBP6.4□□□□□ -1.39
VMS1YDR049W MRP8P35719 219 aa6.4□□□□□ -1.39
VMS1YDR049W DHR2P36009 735 aaPredicted RBP6.4□□□□□ -1.39
VMS1YDR049W KEL2P50090 882 aa6.4□□□□□ -1.39
VMS1YDR049W BNI4P53858 892 aa6.4□□□□□ -1.39
VMS1YDR049W RIA1P53893 1110 aa6.4□□□□□ -1.39
VMS1YDR049W LAP3Q01532 483 aaKnown RBP RIP-Chip data6.4□□□□□ -1.39not detected
VMS1YDR049W EEB1Q02891 456 aa6.4□□□□□ -1.39
VMS1YDR049W GIC2Q06648 383 aa6.4□□□□□ -1.39
VMS1YDR049W RIX7Q07844 837 aaKnown RBP6.4□□□□□ -1.39
VMS1YDR049W TFB4Q12004 338 aa6.4□□□□□ -1.39
VMS1YDR049W TEC1P18412 486 aa6.39□□□□□ -1.39
VMS1YDR049W GUT2P32191 649 aa6.39□□□□□ -1.39
VMS1YDR049W NIP100P33420 868 aa6.39□□□□□ -1.39
VMS1YDR049W KTR2P33550 425 aa6.39□□□□□ -1.39
VMS1YDR049W SRP72P38688 640 aaKnown RBP6.39□□□□□ -1.39
VMS1YDR049W MGS1P40151 587 aa6.39□□□□□ -1.39
VMS1YDR049W PEX21P50091 288 aa6.39□□□□□ -1.39
VMS1YDR049W TUB4P53378 473 aa6.39□□□□□ -1.39
VMS1YDR049W MTQ2Q03920 221 aaPredicted RBP6.39□□□□□ -1.39
VMS1YDR049W SHE9Q04172 456 aa6.39□□□□□ -1.39
VMS1YDR049W RAD33Q04231 177 aa6.39□□□□□ -1.39
VMS1YDR049W YLR287CQ05881 355 aa6.39□□□□□ -1.39
VMS1YDR049W SWA2Q06677 668 aa6.39□□□□□ -1.39
VMS1YDR049W CBC2Q08920 208 aaKnown RBP RIP-Chip data6.39□□□□□ -1.39not detected
VMS1YDR049W SCP160P06105 1222 aaKnown RBP RIP-Chip data6.39□□□□□ -1.39not detected
VMS1YDR049W SUI2P20459 304 aaKnown RBP6.39□□□□□ -1.39
VMS1YDR049W AGP1P25376 633 aa6.39□□□□□ -1.39
VMS1YDR049W POL4P25615 582 aa6.39□□□□□ -1.39
VMS1YDR049W MKK2P32491 506 aa6.39□□□□□ -1.39
VMS1YDR049W BEM3P32873 1128 aa6.39□□□□□ -1.39
VMS1YDR049W SEC26P41810 973 aaKnown RBP6.39□□□□□ -1.39
VMS1YDR049W YFL034WP43564 1073 aa6.39□□□□□ -1.39
VMS1YDR049W UTP8P53276 713 aaKnown RBP6.39□□□□□ -1.39
VMS1YDR049W GTR1Q00582 310 aa6.39□□□□□ -1.39
VMS1YDR049W YPR084WQ06821 456 aa6.39□□□□□ -1.39
VMS1YDR049W AVO1Q08236 1176 aa6.39□□□□□ -1.39
VMS1YDR049W RRG1Q12167 365 aaPredicted RBP6.39□□□□□ -1.39
VMS1YDR049W CMR1Q12510 522 aaKnown RBP6.39□□□□□ -1.39
VMS1YDR049W SMC6Q12749 1114 aa6.39□□□□□ -1.39
VMS1YDR049W GCR1P07261 785 aa6.38□□□□□ -1.39
VMS1YDR049W RER1P25560 188 aa6.38□□□□□ -1.39
VMS1YDR049W OCA1P50946 238 aaPredicted RBP6.38□□□□□ -1.39
VMS1YDR049W ZDS2P54786 942 aa6.38□□□□□ -1.39
VMS1YDR049W BSC2Q05611 235 aa6.38□□□□□ -1.39
VMS1YDR049W ADY3Q07732 790 aa6.38□□□□□ -1.39
VMS1YDR049W MDM12Q92328 271 aa6.38□□□□□ -1.39
VMS1YDR049W HSH49Q99181 213 aaPredicted RBP6.38□□□□□ -1.39
VMS1YDR049W STF1P01098 86 aa6.37□□□□□ -1.39
VMS1YDR049W SAN1P22470 610 aa6.37□□□□□ -1.39
VMS1YDR049W NGR1P32831 672 aaKnown RBP6.37□□□□□ -1.39
VMS1YDR049W ERR3P42222 437 aa6.37□□□□□ -1.39
VMS1YDR049W NCS2P53923 493 aaPredicted RBP6.37□□□□□ -1.39
VMS1YDR049W PTA1Q01329 785 aaPredicted RBP6.37□□□□□ -1.39
VMS1YDR049W LCB5Q06147 687 aaKnown RBP6.37□□□□□ -1.39
VMS1YDR049W DPH6Q12429 685 aa6.37□□□□□ -1.39
VMS1YDR049W SES1P07284 462 aaKnown RBP6.36□□□□□ -1.39
VMS1YDR049W AEP2P22136 580 aa6.36□□□□□ -1.39
VMS1YDR049W PET309P32522 965 aaPredicted RBP6.36□□□□□ -1.39
VMS1YDR049W PTC2P39966 464 aaKnown RBP6.36□□□□□ -1.39
VMS1YDR049W ROG3P43602 733 aa6.36□□□□□ -1.39
VMS1YDR049W DUG1P43616 481 aaKnown RBP6.36□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 10.1 ms