RNA–Protein interactions for RNA: YDL190C

UFD2, Transcript of Ubiquitin chain assembly factor (E4), yeastyeast

Gene UFD2, Length 2,886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD2YDL190C PEX7P39108 375 aa2.09□□□□□ -2.08
UFD2YDL190C UTP5Q04177 643 aaKnown RBP2.09□□□□□ -2.08
UFD2YDL190C MMS1Q06211 1407 aa2.09□□□□□ -2.08
UFD2YDL190C HXK1P04806 485 aaKnown RBP2.08□□□□□ -2.08
UFD2YDL190C RAD2P07276 1031 aa2.08□□□□□ -2.08
UFD2YDL190C PET112P33893 541 aa2.08□□□□□ -2.08
UFD2YDL190C NIT1P40447 199 aa2.08□□□□□ -2.08
UFD2YDL190C CWC24P53769 259 aa2.08□□□□□ -2.08
UFD2YDL190C UBP3Q01477 912 aaKnown RBP RIP-Chip data2.08□□□□□ -2.08 RIP-Chip
UFD2YDL190C MNR2P35724 969 aa2.08□□□□□ -2.08
UFD2YDL190C YHL012WP38709 493 aa2.08□□□□□ -2.08
UFD2YDL190C NOG1Q02892 647 aaKnown RBP2.08□□□□□ -2.08
UFD2YDL190C HRK1Q08732 759 aaKnown RBP2.08□□□□□ -2.08
UFD2YDL190C SCP160P06105 1222 aaKnown RBP RIP-Chip data2.08□□□□□ -2.08not detected
UFD2YDL190C DED1P06634 604 aaKnown RBP2.08□□□□□ -2.08
UFD2YDL190C AIM26P32858 118 aa2.08□□□□□ -2.08
UFD2YDL190C RSA3Q05942 220 aaKnown RBP2.08□□□□□ -2.08
UFD2YDL190C WRS1Q12109 432 aaKnown RBP2.08□□□□□ -2.08
UFD2YDL190C SSF2Q12153 453 aaPredicted RBP2.08□□□□□ -2.08
UFD2YDL190C VMA4P22203 233 aaKnown RBP2.07□□□□□ -2.08
UFD2YDL190C SRP40P32583 406 aaPredicted RBP2.07□□□□□ -2.08
UFD2YDL190C YKL222CP35995 705 aa2.07□□□□□ -2.08
UFD2YDL190C ETP1P38748 585 aaKnown RBP2.07□□□□□ -2.08
UFD2YDL190C NMD2P38798 1089 aaKnown RBP2.07□□□□□ -2.08
UFD2YDL190C MRPS18P42847 217 aa2.07□□□□□ -2.08
UFD2YDL190C ADD66P36040 267 aa2.07□□□□□ -2.08
UFD2YDL190C SPC42P36094 363 aa2.07□□□□□ -2.08
UFD2YDL190C IOC3P43596 787 aa2.07□□□□□ -2.08
UFD2YDL190C DOS2P54858 310 aa2.07□□□□□ -2.08
UFD2YDL190C EST2Q06163 884 aa2.07□□□□□ -2.08
UFD2YDL190C MCD1Q12158 566 aa2.07□□□□□ -2.08
UFD2YDL190C LPX1Q12405 387 aaKnown RBP2.07□□□□□ -2.08
UFD2YDL190C PRE9P23638 258 aaKnown RBP2.06□□□□□ -2.08
UFD2YDL190C YKL091CP33324 310 aaKnown RBP2.06□□□□□ -2.08
UFD2YDL190C QNS1P38795 714 aaKnown RBP2.06□□□□□ -2.08
UFD2YDL190C YJL049WP47048 450 aa2.06□□□□□ -2.08
UFD2YDL190C YJL045WP47052 634 aa2.06□□□□□ -2.08
UFD2YDL190C RNH70P53331 553 aa2.06□□□□□ -2.08
UFD2YDL190C ADI1Q03677 179 aa2.06□□□□□ -2.08
UFD2YDL190C YOR352WQ08816 343 aa2.06□□□□□ -2.08
UFD2YDL190C MDL2P33311 773 aa2.06□□□□□ -2.08
UFD2YDL190C YPL109CQ02981 657 aa2.06□□□□□ -2.08
UFD2YDL190C NSE3Q05541 303 aa2.06□□□□□ -2.08
UFD2YDL190C PPG1P32838 368 aa2.05□□□□□ -2.08
UFD2YDL190C AIM3P38266 947 aaKnown RBP2.05□□□□□ -2.08
UFD2YDL190C VPS53P47061 822 aa2.05□□□□□ -2.08
UFD2YDL190C FAA4P47912 694 aaKnown RBP2.05□□□□□ -2.08
UFD2YDL190C YGL140CP53120 1219 aa2.05□□□□□ -2.08
UFD2YDL190C MRPL22P53881 309 aa2.05□□□□□ -2.08
UFD2YDL190C GDE1Q02979 1223 aa2.05□□□□□ -2.08
UFD2YDL190C CDA2Q06703 312 aa2.05□□□□□ -2.08
UFD2YDL190C NBA1Q08229 501 aaKnown RBP2.05□□□□□ -2.08
UFD2YDL190C DOP1Q03921 1698 aa2.05□□□□□ -2.08
UFD2YDL190C HAP1P0CE41 1502 aa2.05□□□□□ -2.08
UFD2YDL190C CIT2P08679 460 aa2.05□□□□□ -2.08
UFD2YDL190C CDC34P14682 295 aa2.05□□□□□ -2.08
UFD2YDL190C STI1P15705 589 aaKnown RBP RIP-Chip data2.05□□□□□ -2.08not detected
UFD2YDL190C RSB1Q08417 382 aa2.05□□□□□ -2.08
UFD2YDL190C CDC53Q12018 815 aaKnown RBP2.05□□□□□ -2.08
UFD2YDL190C PTC5Q12511 572 aa2.05□□□□□ -2.08
UFD2YDL190C TY1B-BRQ12193 1756 aa2.05□□□□□ -2.08
UFD2YDL190C TY1B-GR3Q12316 1755 aa2.05□□□□□ -2.08
UFD2YDL190C TY1B-ORQ92393 1755 aa2.05□□□□□ -2.08
UFD2YDL190C SAM35P14693 329 aa2.04□□□□□ -2.08
UFD2YDL190C GPB2P39717 880 aa2.04□□□□□ -2.08
UFD2YDL190C PIC2P40035 300 aa2.04□□□□□ -2.08
UFD2YDL190C OSW7P43611 510 aa2.04□□□□□ -2.08
UFD2YDL190C ORC3P54790 616 aa2.04□□□□□ -2.08
UFD2YDL190C TRM3Q07527 1436 aa2.04□□□□□ -2.08
UFD2YDL190C COQ4O13525 335 aa2.04□□□□□ -2.08
UFD2YDL190C SPS1P08458 490 aa2.04□□□□□ -2.08
UFD2YDL190C PRI2P20457 528 aa2.04□□□□□ -2.08
UFD2YDL190C GRX1P25373 110 aaKnown RBP2.04□□□□□ -2.08
UFD2YDL190C KIP1P28742 1111 aa2.04□□□□□ -2.08
UFD2YDL190C YSC84P32793 468 aa2.04□□□□□ -2.08
UFD2YDL190C DUT1P33317 147 aa2.04□□□□□ -2.08
UFD2YDL190C PBP2P38151 413 aaKnown RBP RIP-Chip data2.04□□□□□ -2.08not detected
UFD2YDL190C RKM2Q03942 479 aa2.04□□□□□ -2.08
UFD2YDL190C BDF2Q07442 638 aa2.04□□□□□ -2.08
UFD2YDL190C ESC8Q08119 714 aa2.04□□□□□ -2.08
UFD2YDL190C YOR131CQ12486 218 aa2.04□□□□□ -2.08
UFD2YDL190C SRO9P25567 434 aaKnown RBP2.04□□□□□ -2.08
UFD2YDL190C RPN4Q03465 531 aa2.04□□□□□ -2.08
UFD2YDL190C TDA5Q06417 326 aaKnown RBP2.04□□□□□ -2.08
UFD2YDL190C OPI10Q08202 246 aa2.04□□□□□ -2.08
UFD2YDL190C RTT10Q08924 1013 aa2.04□□□□□ -2.08
UFD2YDL190C YDL177CQ12257 170 aa2.04□□□□□ -2.08
UFD2YDL190C TAF2P23255 1407 aa2.03□□□□□ -2.08
UFD2YDL190C GCR1P07261 785 aa2.03□□□□□ -2.08
UFD2YDL190C SEC23P15303 768 aaKnown RBP2.03□□□□□ -2.08
UFD2YDL190C RRP14P36080 434 aaKnown RBP2.03□□□□□ -2.08
UFD2YDL190C RDH54P38086 958 aa2.03□□□□□ -2.08
UFD2YDL190C ALG3P38179 458 aa2.03□□□□□ -2.08
UFD2YDL190C CCZ1P38273 704 aa2.03□□□□□ -2.08
UFD2YDL190C TAT2P38967 592 aa2.03□□□□□ -2.08
UFD2YDL190C BUD6P41697 788 aa2.03□□□□□ -2.08
UFD2YDL190C HUL5P53119 910 aa2.03□□□□□ -2.08
UFD2YDL190C YGR053CP53234 283 aa2.03□□□□□ -2.08
UFD2YDL190C ALG12P53730 551 aa2.03□□□□□ -2.08
UFD2YDL190C SNO2P53823 222 aa2.03□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 52.5 ms