RNA–Protein interactions for RNA: YCR077C

PAT1, Transcript of Deadenylation-dependent mRNA-decapping factor, yeastyeast

Gene PAT1, Length 2,391 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAT1YCR077C NUR1Q12066 484 aa6.52□□□□□ -1.37
PAT1YCR077C IOC2Q12072 812 aa6.52□□□□□ -1.37
PAT1YCR077C ACP1P32463 125 aa6.51□□□□□ -1.37
PAT1YCR077C SMF1P38925 575 aa6.51□□□□□ -1.37
PAT1YCR077C MEC3Q02574 474 aa6.51□□□□□ -1.37
PAT1YCR077C ESF1Q06344 628 aaKnown RBP6.51□□□□□ -1.37
PAT1YCR077C AFT2Q08957 416 aa6.51□□□□□ -1.37
PAT1YCR077C RSF2P46974 1380 aa6.51□□□□□ -1.37
PAT1YCR077C MPH3P0CE00 602 aa6.51□□□□□ -1.37
PAT1YCR077C OSM1P21375 501 aaKnown RBP6.51□□□□□ -1.37
PAT1YCR077C BUD14P27637 709 aa6.51□□□□□ -1.37
PAT1YCR077C MRF1P30775 413 aaPredicted RBP6.51□□□□□ -1.37
PAT1YCR077C KAR9P32526 644 aa6.51□□□□□ -1.37
PAT1YCR077C CNS1P33313 385 aa6.51□□□□□ -1.37
PAT1YCR077C ATG14P38270 344 aa6.51□□□□□ -1.37
PAT1YCR077C ERG5P54781 538 aa6.51□□□□□ -1.37
PAT1YCR077C SDH5Q08230 162 aa6.51□□□□□ -1.37
PAT1YCR077C CDC31P06704 161 aaKnown RBP6.5□□□□□ -1.37
PAT1YCR077C MRPS28P21771 286 aa6.5□□□□□ -1.37
PAT1YCR077C SPO11P23179 398 aa6.5□□□□□ -1.37
PAT1YCR077C YET1P35723 206 aa6.5□□□□□ -1.37
PAT1YCR077C SSZ1P38788 538 aaKnown RBP6.5□□□□□ -1.37
PAT1YCR077C GGA2P38817 585 aaKnown RBP6.5□□□□□ -1.37
PAT1YCR077C YIL055CP40523 627 aaKnown RBP6.5□□□□□ -1.37
PAT1YCR077C FCP1Q03254 732 aa6.5□□□□□ -1.37
PAT1YCR077C JIP5Q06214 492 aaPredicted RBP6.5□□□□□ -1.37
PAT1YCR077C RAD1P06777 1100 aa6.5□□□□□ -1.37
PAT1YCR077C PMR1P13586 950 aa6.5□□□□□ -1.37
PAT1YCR077C BMH1P29311 267 aaKnown RBP6.5□□□□□ -1.37
PAT1YCR077C CSE1P33307 960 aa6.5□□□□□ -1.37
PAT1YCR077C SKI2P35207 1287 aaKnown RBP RIP-Chip data6.5□□□□□ -1.37not detected
PAT1YCR077C HEL1P36113 551 aa6.5□□□□□ -1.37
PAT1YCR077C GIR2Q03768 265 aaPredicted RBP6.5□□□□□ -1.37
PAT1YCR077C YLR271WQ06152 274 aa6.5□□□□□ -1.37
PAT1YCR077C PFK2P16862 959 aaKnown RBP RIP-Chip data6.49□□□□□ -1.37not detected
PAT1YCR077C SEC18P18759 758 aaKnown RBP6.49□□□□□ -1.37
PAT1YCR077C PRE10P21242 288 aaKnown RBP RIP-Chip data6.49□□□□□ -1.37not detected
PAT1YCR077C SMY2P32909 740 aaKnown RBP6.49□□□□□ -1.37
PAT1YCR077C ARC19P33204 171 aaKnown RBP6.49□□□□□ -1.37
PAT1YCR077C RPN10P38886 268 aaKnown RBP6.49□□□□□ -1.37
PAT1YCR077C ATG3P40344 310 aa6.49□□□□□ -1.37
PAT1YCR077C NGL3Q03210 505 aa6.49□□□□□ -1.37
PAT1YCR077C STE20Q03497 939 aaKnown RBP6.49□□□□□ -1.37
PAT1YCR077C MTC5Q03897 1148 aa6.49□□□□□ -1.37
PAT1YCR077C ARP8Q12386 881 aaKnown RBP RIP-Chip data6.49□□□□□ -1.37not detected
PAT1YCR077C RPS6AP0CX37 236 aaKnown RBP6.49□□□□□ -1.37
PAT1YCR077C RPS6BP0CX38 236 aaPredicted RBP6.49□□□□□ -1.37
PAT1YCR077C MCM3P24279 971 aaKnown RBP6.49□□□□□ -1.37
PAT1YCR077C PEX5P35056 612 aa6.49□□□□□ -1.37
PAT1YCR077C CTM1P38818 585 aa6.49□□□□□ -1.37
PAT1YCR077C SHQ1P40486 507 aaPredicted RBP6.49□□□□□ -1.37
PAT1YCR077C PXA1P41909 870 aa6.49□□□□□ -1.37
PAT1YCR077C TRS85P46944 698 aa6.49□□□□□ -1.37
PAT1YCR077C SMD2Q06217 110 aaKnown RBP6.49□□□□□ -1.37
PAT1YCR077C TUM1Q08686 304 aaKnown RBP6.49□□□□□ -1.37
PAT1YCR077C YPR204WQ08995 1032 aa6.49□□□□□ -1.37
PAT1YCR077C CDC6P09119 513 aa6.48□□□□□ -1.37
PAT1YCR077C GAL11P19659 1081 aa6.48□□□□□ -1.37
PAT1YCR077C RAD53P22216 821 aa6.48□□□□□ -1.37
PAT1YCR077C RAD57P25301 460 aa6.48□□□□□ -1.37
PAT1YCR077C SAC6P32599 642 aaKnown RBP6.48□□□□□ -1.37
PAT1YCR077C PET112P33893 541 aa6.48□□□□□ -1.37
PAT1YCR077C VPS35P34110 944 aa6.48□□□□□ -1.37
PAT1YCR077C RPC37P36121 282 aa6.48□□□□□ -1.37
PAT1YCR077C NCS2P53923 493 aaPredicted RBP6.48□□□□□ -1.37
PAT1YCR077C INP2Q03824 705 aa6.48□□□□□ -1.37
PAT1YCR077C YDL073WQ07454 984 aa6.48□□□□□ -1.37
PAT1YCR077C NEW1Q08972 1196 aaKnown RBP6.48□□□□□ -1.37
PAT1YCR077C HSP42Q12329 375 aa6.48□□□□□ -1.37
PAT1YCR077C PAP1P29468 568 aaKnown RBP6.47□□□□□ -1.37
PAT1YCR077C PDB1P32473 366 aaKnown RBP6.47□□□□□ -1.37
PAT1YCR077C NPL4P33755 580 aa6.47□□□□□ -1.37
PAT1YCR077C PET100P38958 111 aa6.47□□□□□ -1.37
PAT1YCR077C YGR237CP50089 785 aa6.47□□□□□ -1.37
PAT1YCR077C YNL058CP53947 316 aa6.47□□□□□ -1.37
PAT1YCR077C UBP16Q02863 499 aa6.47□□□□□ -1.37
PAT1YCR077C RSM28Q03430 361 aa6.47□□□□□ -1.37
PAT1YCR077C SSF2Q12153 453 aaPredicted RBP6.47□□□□□ -1.37
PAT1YCR077C MTF2P10849 440 aa6.47□□□□□ -1.37
PAT1YCR077C SPO12P17123 173 aa6.47□□□□□ -1.37
PAT1YCR077C BCD1P38772 366 aa6.47□□□□□ -1.37
PAT1YCR077C CRG1P38892 291 aaRIP-Chip data6.47□□□□□ -1.37not detected
PAT1YCR077C MRX1P40050 688 aa6.47□□□□□ -1.37
PAT1YCR077C FAF1P40546 346 aaPredicted RBP6.47□□□□□ -1.37
PAT1YCR077C MAD1P40957 749 aa6.47□□□□□ -1.37
PAT1YCR077C FYV8P46949 817 aaKnown RBP6.47□□□□□ -1.37
PAT1YCR077C YBP2P53169 641 aa6.47□□□□□ -1.37
PAT1YCR077C YNL193WP53870 558 aa6.47□□□□□ -1.37
PAT1YCR077C LCB5Q06147 687 aaKnown RBP6.47□□□□□ -1.37
PAT1YCR077C RKM4Q12504 494 aa6.47□□□□□ -1.37
PAT1YCR077C PIF1P07271 859 aa6.46□□□□□ -1.37
PAT1YCR077C KRS1P15180 591 aaKnown RBP6.46□□□□□ -1.37
PAT1YCR077C VPS1P21576 704 aaKnown RBP6.46□□□□□ -1.37
PAT1YCR077C SEC15P22224 910 aa6.46□□□□□ -1.37
PAT1YCR077C SWI4P25302 1093 aaKnown RBP6.46□□□□□ -1.37
PAT1YCR077C CDC60P26637 1090 aaKnown RBP6.46□□□□□ -1.37
PAT1YCR077C MET1P36150 593 aa6.46□□□□□ -1.37
PAT1YCR077C AKR1P39010 764 aa6.46□□□□□ -1.37
PAT1YCR077C ERB1Q04660 807 aaKnown RBP6.46□□□□□ -1.37
PAT1YCR077C SGT2Q12118 346 aaKnown RBP6.46□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 106.1 ms