RNA–Protein interactions for RNA: YBR272C

HSM3, Transcript of Proteasome-interacting protein, yeast

Gene HSM3, Length 1,443 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HSM3	YBR272C	GLC3	P32775	704 aa		7.38	□□□□□ -1.23
HSM3	YBR272C	MRP8	P35719	219 aa		7.38	□□□□□ -1.23
HSM3	YBR272C	RFC1	P38630	861 aa	Known RBP	7.38	□□□□□ -1.23
HSM3	YBR272C	RRP8	P38961	392 aa	Known RBP	7.38	□□□□□ -1.23
HSM3	YBR272C	RIC1	P40395	1056 aa		7.38	□□□□□ -1.23
HSM3	YBR272C	IML2	P47031	731 aa		7.38	□□□□□ -1.23
HSM3	YBR272C	SRB7	P47822	140 aa		7.38	□□□□□ -1.23
HSM3	YBR272C	NUP42	P49686	430 aa	Known RBP	7.38	□□□□□ -1.23
HSM3	YBR272C	UTP22	P53254	1237 aa	Predicted RBP	7.38	□□□□□ -1.23
HSM3	YBR272C	ASI1	P54074	624 aa		7.38	□□□□□ -1.23
HSM3	YBR272C	CWC21	Q03375	135 aa	Known RBP	7.38	□□□□□ -1.23
HSM3	YBR272C	IRC3	Q06683	689 aa		7.38	□□□□□ -1.23
HSM3	YBR272C	YPL277C	Q08989	487 aa		7.38	□□□□□ -1.23
HSM3	YBR272C	IOC2	Q12072	812 aa		7.38	□□□□□ -1.23
HSM3	YBR272C	SNF2	P22082	1703 aa		7.37	□□□□□ -1.23
HSM3	YBR272C	PTR2	P32901	601 aa		7.37	□□□□□ -1.23
HSM3	YBR272C	BMH2	P34730	273 aa	Known RBP	7.37	□□□□□ -1.23
HSM3	YBR272C	SLX1	P38324	304 aa		7.37	□□□□□ -1.23
HSM3	YBR272C	PEX18	P38855	283 aa		7.37	□□□□□ -1.23
HSM3	YBR272C	SAP155	P43612	1002 aa		7.37	□□□□□ -1.23
HSM3	YBR272C	STU2	P46675	888 aa		7.37	□□□□□ -1.23
HSM3	YBR272C	DAS1	P47005	663 aa		7.37	□□□□□ -1.23
HSM3	YBR272C	RPN4	Q03465	531 aa		7.37	□□□□□ -1.23
HSM3	YBR272C	NSE3	Q05541	303 aa		7.37	□□□□□ -1.23
HSM3	YBR272C	LSO2	Q3E772	92 aa	Known RBP	7.37	□□□□□ -1.23
HSM3	YBR272C	RPS24A	P0CX31	135 aa	Known RBP	7.36	□□□□□ -1.23
HSM3	YBR272C	RPS24B	P0CX32	135 aa	Known RBP	7.36	□□□□□ -1.23
HSM3	YBR272C	DIT2	P21595	489 aa		7.36	□□□□□ -1.23
HSM3	YBR272C	LHS1	P36016	881 aa		7.36	□□□□□ -1.23
HSM3	YBR272C	YAP5	P40574	245 aa		7.36	□□□□□ -1.23
HSM3	YBR272C	PHB1	P40961	287 aa		7.36	□□□□□ -1.23
HSM3	YBR272C	SXM1	Q04175	944 aa	Known RBP	7.36	□□□□□ -1.23
HSM3	YBR272C	VAM6	Q07468	1049 aa		7.36	□□□□□ -1.23
HSM3	YBR272C	RRP36	Q12481	300 aa	Predicted RBP	7.36	□□□□□ -1.23
HSM3	YBR272C	PDR18	P53756	1333 aa		7.36	□□□□□ -1.23
HSM3	YBR272C	YML133C	Q03099	1374 aa		7.36	□□□□□ -1.23
HSM3	YBR272C	YLL067C	Q07888	1374 aa		7.36	□□□□□ -1.23
HSM3	YBR272C	YLL066C	Q99208	1374 aa		7.36	□□□□□ -1.23
HSM3	YBR272C	TPM1	P17536	199 aa	Known RBP	7.35	□□□□□ -1.23
HSM3	YBR272C	SEC66	P33754	206 aa		7.35	□□□□□ -1.23
HSM3	YBR272C	MIA40	P36046	403 aa		7.35	□□□□□ -1.23
HSM3	YBR272C	ABZ1	P37254	787 aa	Predicted RBP	7.35	□□□□□ -1.23
HSM3	YBR272C	RXT2	P38255	430 aa		7.35	□□□□□ -1.23
HSM3	YBR272C	SNX4	P47057	423 aa		7.35	□□□□□ -1.23
HSM3	YBR272C	ECL1	P48235	211 aa		7.35	□□□□□ -1.23
HSM3	YBR272C	COP1	P53622	1201 aa	Known RBP	7.35	□□□□□ -1.23
HSM3	YBR272C	YPL225W	Q08971	146 aa	Known RBP	7.35	□□□□□ -1.23
HSM3	YBR272C	NOT5	Q12514	560 aa	Predicted RBP	7.35	□□□□□ -1.23
HSM3	YBR272C	SUI3	P09064	285 aa	Known RBP	7.35	□□□□□ -1.23
HSM3	YBR272C	STE6	P12866	1290 aa		7.35	□□□□□ -1.23
HSM3	YBR272C	MCM2	P29469	868 aa		7.35	□□□□□ -1.23
HSM3	YBR272C	HCS1	P34243	683 aa		7.35	□□□□□ -1.23
HSM3	YBR272C	MNR2	P35724	969 aa		7.35	□□□□□ -1.23
HSM3	YBR272C	SAK1	P38990	1142 aa		7.35	□□□□□ -1.23
HSM3	YBR272C	ESL1	P40456	1118 aa		7.35	□□□□□ -1.23
HSM3	YBR272C	DIP5	P53388	608 aa		7.35	□□□□□ -1.23
HSM3	YBR272C	SQS1	P53866	767 aa	Known RBP	7.35	□□□□□ -1.23
HSM3	YBR272C	ULP1	Q02724	621 aa		7.35	□□□□□ -1.23
HSM3	YBR272C	FRK1	Q03002	865 aa	Predicted RBP	7.35	□□□□□ -1.23
HSM3	YBR272C	SPN1	Q06505	410 aa	Predicted RBP	7.35	□□□□□ -1.23
HSM3	YBR272C	AOS1	Q06624	347 aa		7.35	□□□□□ -1.23
HSM3	YBR272C	GIC2	Q06648	383 aa		7.35	□□□□□ -1.23
HSM3	YBR272C	MDM36	Q06820	579 aa		7.35	□□□□□ -1.23
HSM3	YBR272C	BRX1	Q08235	291 aa	Known RBP	7.35	□□□□□ -1.23
HSM3	YBR272C	MSB4	Q12317	492 aa		7.35	□□□□□ -1.23
HSM3	YBR272C	COX6	P00427	148 aa		7.34	□□□□□ -1.23
HSM3	YBR272C	TUF1	P02992	437 aa	Known RBP	7.34	□□□□□ -1.23
HSM3	YBR272C	ARD1	P07347	238 aa	Predicted RBP	7.34	□□□□□ -1.23
HSM3	YBR272C	SSC1	P0CS90	654 aa	Known RBP	7.34	□□□□□ -1.23
HSM3	YBR272C	OCA4	P25366	362 aa		7.34	□□□□□ -1.23
HSM3	YBR272C	RPN2	P32565	945 aa	Known RBP	7.34	□□□□□ -1.23
HSM3	YBR272C	RRN6	P32786	894 aa		7.34	□□□□□ -1.23
HSM3	YBR272C	SRL3	P36167	246 aa		7.34	□□□□□ -1.23
HSM3	YBR272C	UBP14	P38237	781 aa	Known RBP	7.34	□□□□□ -1.23
HSM3	YBR272C	CAJ1	P39101	391 aa		7.34	□□□□□ -1.23
HSM3	YBR272C	GCD10	P41814	478 aa		7.34	□□□□□ -1.23
HSM3	YBR272C	CAF130	P53280	1122 aa	Predicted RBP	7.34	□□□□□ -1.23
HSM3	YBR272C	SDA1	P53313	767 aa	Known RBP	7.34	□□□□□ -1.23
HSM3	YBR272C	CEG1	Q01159	459 aa	Predicted RBP	7.34	□□□□□ -1.23
HSM3	YBR272C	ADA2	Q02336	434 aa		7.34	□□□□□ -1.23
HSM3	YBR272C	YMR018W	Q04364	514 aa		7.34	□□□□□ -1.23
HSM3	YBR272C	PUS5	Q06244	254 aa		7.34	□□□□□ -1.23
HSM3	YBR272C	AIM7	Q12156	149 aa		7.34	□□□□□ -1.23
HSM3	YBR272C	MAK21	Q12176	1025 aa	Known RBP	7.34	□□□□□ -1.23
HSM3	YBR272C	TAF3	Q12297	353 aa		7.34	□□□□□ -1.23
HSM3	YBR272C	LEU2	P04173	364 aa	Predicted RBP	7.33	□□□□□ -1.24
HSM3	YBR272C	RPS3	P05750	240 aa	Known RBP	7.33	□□□□□ -1.24
HSM3	YBR272C	KEX1	P09620	729 aa		7.33	□□□□□ -1.24
HSM3	YBR272C	SSB1	P11484	613 aa	Known RBP	7.33	□□□□□ -1.24
HSM3	YBR272C	ECM32	P32644	1121 aa	Known RBP	7.33	□□□□□ -1.24
HSM3	YBR272C	SLD2	P34252	453 aa		7.33	□□□□□ -1.24
HSM3	YBR272C	YRO2	P38079	344 aa		7.33	□□□□□ -1.24
HSM3	YBR272C	PSY4	P38193	441 aa		7.33	□□□□□ -1.24
HSM3	YBR272C	SSB2	P40150	613 aa	Known RBP	7.33	□□□□□ -1.24
HSM3	YBR272C	ATG3	P40344	310 aa		7.33	□□□□□ -1.24
HSM3	YBR272C	PLP1	Q04004	230 aa		7.33	□□□□□ -1.24
HSM3	YBR272C	RAD33	Q04231	177 aa		7.33	□□□□□ -1.24
HSM3	YBR272C	SWA2	Q06677	668 aa		7.33	□□□□□ -1.24
HSM3	YBR272C	GRC3	Q07845	632 aa		7.33	□□□□□ -1.24
HSM3	YBR272C	NOB1	Q08444	459 aa	Known RBP	7.33	□□□□□ -1.24

Retrieved 100 of 5,963 RNA–protein pairs in 28.9 ms