RNA–Protein interactions for RNA: YAL040C

CLN3, Transcript of G1 cyclin involved in cell cycle progression, yeastyeast

Gene CLN3, Length 1,743 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CLN3YAL040C ATG1P53104 897 aa2.91□□□□□ -1.94
CLN3YAL040C RRP46P53256 223 aaPredicted RBP2.91□□□□□ -1.94
CLN3YAL040C CTR9P89105 1077 aa2.91□□□□□ -1.94
CLN3YAL040C RPS24AP0CX31 135 aaKnown RBP2.9□□□□□ -1.94
CLN3YAL040C RPS24BP0CX32 135 aaKnown RBP2.9□□□□□ -1.94
CLN3YAL040C NPR1P22211 790 aa2.9□□□□□ -1.94
CLN3YAL040C SPC42P36094 363 aa2.9□□□□□ -1.94
CLN3YAL040C RIM11P38615 370 aa2.9□□□□□ -1.94
CLN3YAL040C FUN12P39730 1002 aaKnown RBP2.9□□□□□ -1.94
CLN3YAL040C UBP5P39944 805 aa2.9□□□□□ -1.94
CLN3YAL040C MEC3Q02574 474 aa2.9□□□□□ -1.94
CLN3YAL040C MSH6Q03834 1242 aa2.9□□□□□ -1.94
CLN3YAL040C CMR1Q12510 522 aaKnown RBP2.9□□□□□ -1.94
CLN3YAL040C DFG16Q99234 619 aa2.9□□□□□ -1.94
CLN3YAL040C LEU2P04173 364 aaPredicted RBP2.9□□□□□ -1.95
CLN3YAL040C HTS1P07263 546 aaKnown RBP2.9□□□□□ -1.95
CLN3YAL040C ACF4P47129 309 aa2.9□□□□□ -1.95
CLN3YAL040C UTP22P53254 1237 aaPredicted RBP2.9□□□□□ -1.95
CLN3YAL040C FPR4Q06205 392 aaPredicted RBP2.9□□□□□ -1.95
CLN3YAL040C COBP00163 385 aa2.89□□□□□ -1.95
CLN3YAL040C YRF1-3P0CX14 1859 aa2.89□□□□□ -1.95
CLN3YAL040C YRF1-7P0CX15 1859 aa2.89□□□□□ -1.95
CLN3YAL040C RPS4AP0CX35 261 aaKnown RBP2.89□□□□□ -1.95
CLN3YAL040C RPS4BP0CX36 261 aaKnown RBP2.89□□□□□ -1.95
CLN3YAL040C PRP5P21372 849 aaPredicted RBP2.89□□□□□ -1.95
CLN3YAL040C RNQ1P25367 405 aa2.89□□□□□ -1.95
CLN3YAL040C SEG2P34250 1132 aa2.89□□□□□ -1.95
CLN3YAL040C LRG1P35688 1017 aa2.89□□□□□ -1.95
CLN3YAL040C SEA4P38164 1038 aa2.89□□□□□ -1.95
CLN3YAL040C MTR4P47047 1073 aaKnown RBP2.89□□□□□ -1.95
CLN3YAL040C YRB30P53107 440 aaPredicted RBP2.89□□□□□ -1.95
CLN3YAL040C PRP43P53131 767 aaKnown RBP2.89□□□□□ -1.95
CLN3YAL040C YRF1-6P53819 1859 aa2.89□□□□□ -1.95
CLN3YAL040C KAR2P16474 682 aaKnown RBP2.88□□□□□ -1.95
CLN3YAL040C REI1P38344 393 aaPredicted RBP2.88□□□□□ -1.95
CLN3YAL040C YHL008CP38750 627 aa2.88□□□□□ -1.95
CLN3YAL040C MPP10P47083 593 aaKnown RBP2.88□□□□□ -1.95
CLN3YAL040C YNL011CP53980 444 aa2.88□□□□□ -1.95
CLN3YAL040C TRS120Q04183 1289 aa2.88□□□□□ -1.95
CLN3YAL040C BSC2Q05611 235 aa2.88□□□□□ -1.95
CLN3YAL040C PMT7Q06644 662 aa2.88□□□□□ -1.95
CLN3YAL040C FLP1P03870 423 aa2.88□□□□□ -1.95
CLN3YAL040C SEC20P28791 383 aa2.88□□□□□ -1.95
CLN3YAL040C ARL1P38116 183 aaKnown RBP2.88□□□□□ -1.95
CLN3YAL040C STM1P39015 273 aaKnown RBP2.88□□□□□ -1.95
CLN3YAL040C OYE3P41816 400 aaPredicted RBP2.88□□□□□ -1.95
CLN3YAL040C SAP155P43612 1002 aa2.88□□□□□ -1.95
CLN3YAL040C CDC55Q00362 526 aa2.88□□□□□ -1.95
CLN3YAL040C YDL144CQ07589 356 aa2.88□□□□□ -1.95
CLN3YAL040C HAT1Q12341 374 aa2.88□□□□□ -1.95
CLN3YAL040C SUI2P20459 304 aaKnown RBP2.87□□□□□ -1.95
CLN3YAL040C GAS1P22146 559 aaKnown RBP2.87□□□□□ -1.95
CLN3YAL040C ADP1P25371 1049 aa2.87□□□□□ -1.95
CLN3YAL040C PRP45P28004 379 aaPredicted RBP2.87□□□□□ -1.95
CLN3YAL040C DUR3P33413 735 aa2.87□□□□□ -1.95
CLN3YAL040C HSP78P33416 811 aa2.87□□□□□ -1.95
CLN3YAL040C MSH4P40965 878 aaPredicted RBP2.87□□□□□ -1.95
CLN3YAL040C ALT1P52893 592 aa2.87□□□□□ -1.95
CLN3YAL040C PAP2P53632 584 aaKnown RBP2.87□□□□□ -1.95
CLN3YAL040C TAP42Q04372 366 aa2.87□□□□□ -1.95
CLN3YAL040C SVF1Q05515 481 aa2.87□□□□□ -1.95
CLN3YAL040C ALG6Q12001 544 aaKnown RBP2.87□□□□□ -1.95
CLN3YAL040C RIM15P43565 1770 aa2.87□□□□□ -1.95
CLN3YAL040C YRF1-4O13559 1382 aa2.86□□□□□ -1.95
CLN3YAL040C NFS1P25374 497 aa2.86□□□□□ -1.95
CLN3YAL040C SMY2P32909 740 aaKnown RBP2.86□□□□□ -1.95
CLN3YAL040C NMD2P38798 1089 aaKnown RBP2.86□□□□□ -1.95
CLN3YAL040C NUG1P40010 520 aaKnown RBP2.86□□□□□ -1.95
CLN3YAL040C RTR1P40084 226 aaPredicted RBP2.86□□□□□ -1.95
CLN3YAL040C ATG36P46983 293 aa2.86□□□□□ -1.95
CLN3YAL040C YAF9P53930 226 aa2.86□□□□□ -1.95
CLN3YAL040C THI22Q06490 572 aa2.86□□□□□ -1.95
CLN3YAL040C RRP15Q06511 250 aaPredicted RBP2.86□□□□□ -1.95
CLN3YAL040C AVO1Q08236 1176 aa2.86□□□□□ -1.95
CLN3YAL040C RVB2Q12464 471 aaKnown RBP2.86□□□□□ -1.95
CLN3YAL040C RPO41P13433 1351 aaKnown RBP2.86□□□□□ -1.95
CLN3YAL040C PRD1P25375 712 aa2.85□□□□□ -1.95
CLN3YAL040C SCT1P32784 759 aa2.85□□□□□ -1.95
CLN3YAL040C NNK1P36003 928 aa2.85□□□□□ -1.95
CLN3YAL040C SHU2P38957 223 aa2.85□□□□□ -1.95
CLN3YAL040C NNF1P47149 201 aa2.85□□□□□ -1.95
CLN3YAL040C NUT1P53114 1132 aa2.85□□□□□ -1.95
CLN3YAL040C TRE1Q08919 783 aa2.85□□□□□ -1.95
CLN3YAL040C MCM5P29496 775 aaKnown RBP2.85□□□□□ -1.95
CLN3YAL040C GRX4P32642 244 aa2.85□□□□□ -1.95
CLN3YAL040C SWE1P32944 819 aa2.85□□□□□ -1.95
CLN3YAL040C YKL222CP35995 705 aa2.85□□□□□ -1.95
CLN3YAL040C YKL077WP36081 392 aa2.85□□□□□ -1.95
CLN3YAL040C GRS1P38088 690 aaKnown RBP2.85□□□□□ -1.95
CLN3YAL040C YGR045CP53229 120 aa2.85□□□□□ -1.95
CLN3YAL040C ELA1P53861 379 aaPredicted RBP2.85□□□□□ -1.95
CLN3YAL040C HEF3P53978 1044 aaKnown RBP2.85□□□□□ -1.95
CLN3YAL040C ORC3P54790 616 aa2.85□□□□□ -1.95
CLN3YAL040C SSY1Q03770 852 aa2.85□□□□□ -1.95
CLN3YAL040C RTT109Q07794 436 aa2.85□□□□□ -1.95
CLN3YAL040C MNL2Q12205 849 aa2.85□□□□□ -1.95
CLN3YAL040C YVC1Q12324 675 aa2.85□□□□□ -1.95
CLN3YAL040C PRO1P32264 428 aa2.84□□□□□ -1.96
CLN3YAL040C AKL1P38080 1108 aaKnown RBP2.84□□□□□ -1.96
CLN3YAL040C RVS167P39743 482 aaKnown RBP2.84□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 116.6 ms