RNA–Protein interactions for RNA: YAL021C

CCR4, Transcript of Component of the CCR4-NOT transcriptional complex, yeastyeast

Gene CCR4, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCR4YAL021C YKU80Q04437 629 aa7.89□□□□□ -1.15
CCR4YAL021C NOB1Q08444 459 aaKnown RBP7.89□□□□□ -1.15
CCR4YAL021C ABP140Q08641 628 aaKnown RBP7.89□□□□□ -1.15
CCR4YAL021C SMC6Q12749 1114 aa7.89□□□□□ -1.15
CCR4YAL021C RSR1P13856 272 aa7.89□□□□□ -1.15
CCR4YAL021C TUP1P16649 713 aa7.89□□□□□ -1.15
CCR4YAL021C SUI2P20459 304 aaKnown RBP7.89□□□□□ -1.15
CCR4YAL021C HSP78P33416 811 aa7.89□□□□□ -1.15
CCR4YAL021C SLX1P38324 304 aa7.89□□□□□ -1.15
CCR4YAL021C RRP8P38961 392 aaKnown RBP7.89□□□□□ -1.15
CCR4YAL021C YEL023CP39992 682 aa7.89□□□□□ -1.15
CCR4YAL021C MET12P46151 657 aa7.89□□□□□ -1.15
CCR4YAL021C APS3P47064 194 aa7.89□□□□□ -1.15
CCR4YAL021C CWC15Q03772 175 aaKnown RBP7.89□□□□□ -1.15
CCR4YAL021C ATG13Q06628 738 aa7.89□□□□□ -1.15
CCR4YAL021C RTT10Q08924 1013 aa7.89□□□□□ -1.15
CCR4YAL021C OSH2Q12451 1283 aa7.89□□□□□ -1.15
CCR4YAL021C TY2B-LR1P0C2J3 1770 aa7.89□□□□□ -1.15
CCR4YAL021C TY2B-FP0CX63 1770 aa7.89□□□□□ -1.15
CCR4YAL021C TY2B-GR2P0CX64 1770 aa7.89□□□□□ -1.15
CCR4YAL021C TY2B-CP25384 1770 aa7.89□□□□□ -1.15
CCR4YAL021C TY2B-DR2Q03494 1770 aa7.89□□□□□ -1.15
CCR4YAL021C TY1B-DR1Q03855 1755 aa7.89□□□□□ -1.15
CCR4YAL021C TY2B-DR3Q07791 1770 aaKnown RBP7.89□□□□□ -1.15
CCR4YAL021C TY2B-OR1Q12113 1770 aa7.89□□□□□ -1.15
CCR4YAL021C TY2B-DR1Q12472 1770 aa7.89□□□□□ -1.15
CCR4YAL021C TY2B-BQ12491 1770 aa7.89□□□□□ -1.15
CCR4YAL021C TY2B-OR2Q12501 1770 aa7.89□□□□□ -1.15
CCR4YAL021C TY1B-DR3Q99231 1755 aa7.89□□□□□ -1.15
CCR4YAL021C VAN1P23642 535 aa7.88□□□□□ -1.15
CCR4YAL021C RPN12P32496 274 aa7.88□□□□□ -1.15
CCR4YAL021C YHB1P39676 399 aaKnown RBP7.88□□□□□ -1.15
CCR4YAL021C RVS167P39743 482 aaKnown RBP7.88□□□□□ -1.15
CCR4YAL021C CIR1P42940 261 aa7.88□□□□□ -1.15
CCR4YAL021C RBL2P48606 106 aaKnown RBP7.88□□□□□ -1.15
CCR4YAL021C HST1P53685 503 aa7.88□□□□□ -1.15
CCR4YAL021C FDC1Q03034 503 aa7.88□□□□□ -1.15
CCR4YAL021C ATG38Q05789 226 aaKnown RBP7.88□□□□□ -1.15
CCR4YAL021C YPQ2Q06328 317 aa7.88□□□□□ -1.15
CCR4YAL021C ISA1Q07821 250 aaPredicted RBP7.88□□□□□ -1.15
CCR4YAL021C RAV1P47104 1357 aa7.88□□□□□ -1.15
CCR4YAL021C MET5P47169 1442 aa7.87□□□□□ -1.15
CCR4YAL021C NUP159P40477 1460 aa7.87□□□□□ -1.15
CCR4YAL021C KAR1P11927 433 aa7.87□□□□□ -1.15
CCR4YAL021C KRR1P25586 316 aaPredicted RBP7.87□□□□□ -1.15
CCR4YAL021C MAK5P38112 773 aaPredicted RBP7.87□□□□□ -1.15
CCR4YAL021C PEX18P38855 283 aa7.87□□□□□ -1.15
CCR4YAL021C YFL066CP43538 392 aa7.87□□□□□ -1.15
CCR4YAL021C YGR153WP48238 217 aa7.87□□□□□ -1.15
CCR4YAL021C TAF12Q03761 539 aa7.87□□□□□ -1.15
CCR4YAL021C RRP6Q12149 733 aaKnown RBP7.87□□□□□ -1.15
CCR4YAL021C AUS1Q08409 1394 aa7.87□□□□□ -1.15
CCR4YAL021C PDR5P33302 1511 aaKnown RBP7.87□□□□□ -1.15
CCR4YAL021C SSB1P11484 613 aaKnown RBP7.87□□□□□ -1.15
CCR4YAL021C MGM1P32266 881 aa7.87□□□□□ -1.15
CCR4YAL021C XRS2P33301 854 aa7.87□□□□□ -1.15
CCR4YAL021C DUR3P33413 735 aa7.87□□□□□ -1.15
CCR4YAL021C SAS3P34218 831 aa7.87□□□□□ -1.15
CCR4YAL021C SSB2P40150 613 aaKnown RBP7.87□□□□□ -1.15
CCR4YAL021C URB2P47108 1174 aa7.87□□□□□ -1.15
CCR4YAL021C HAM1P47119 197 aaKnown RBP7.87□□□□□ -1.15
CCR4YAL021C ADA2Q02336 434 aa7.87□□□□□ -1.15
CCR4YAL021C YMR018WQ04364 514 aa7.87□□□□□ -1.15
CCR4YAL021C MAG2Q06436 670 aaKnown RBP7.87□□□□□ -1.15
CCR4YAL021C BUG1Q12191 341 aa7.87□□□□□ -1.15
CCR4YAL021C CLB4P24871 460 aa7.86□□□□□ -1.15
CCR4YAL021C RNR4P49723 345 aaKnown RBP7.86□□□□□ -1.15
CCR4YAL021C SHE10P53075 577 aa7.86□□□□□ -1.15
CCR4YAL021C TAF11Q04226 346 aa7.86□□□□□ -1.15
CCR4YAL021C SEC21P32074 935 aaKnown RBP7.86□□□□□ -1.15
CCR4YAL021C NPL6P32832 435 aa7.86□□□□□ -1.15
CCR4YAL021C RTG3P38165 486 aa7.86□□□□□ -1.15
CCR4YAL021C YSW1P38280 609 aa7.86□□□□□ -1.15
CCR4YAL021C BFR1P38934 470 aaKnown RBP RIP-Chip data7.86□□□□□ -1.15 RIP-Chip
CCR4YAL021C MNT3P40549 630 aa7.86□□□□□ -1.15
CCR4YAL021C MPS2P53159 387 aa7.86□□□□□ -1.15
CCR4YAL021C KRE33P53914 1056 aaKnown RBP7.86□□□□□ -1.15
CCR4YAL021C RAD33Q04231 177 aa7.86□□□□□ -1.15
CCR4YAL021C FAR8Q05040 523 aa7.86□□□□□ -1.15
CCR4YAL021C MDM36Q06820 579 aa7.86□□□□□ -1.15
CCR4YAL021C GPR1Q12361 961 aa7.86□□□□□ -1.15
CCR4YAL021C SSE1P32589 693 aaKnown RBP7.85□□□□□ -1.15
CCR4YAL021C SFA1P32771 386 aa7.85□□□□□ -1.15
CCR4YAL021C SLA1P32790 1244 aa7.85□□□□□ -1.15
CCR4YAL021C RPC34P32910 317 aa7.85□□□□□ -1.15
CCR4YAL021C NSE3Q05541 303 aa7.85□□□□□ -1.15
CCR4YAL021C DON1Q05610 365 aa7.85□□□□□ -1.15
CCR4YAL021C SRS2P12954 1174 aa7.85□□□□□ -1.15
CCR4YAL021C SET3P36124 751 aa7.85□□□□□ -1.15
CCR4YAL021C IFA38P38286 347 aa7.85□□□□□ -1.15
CCR4YAL021C VPS29P38759 282 aa7.85□□□□□ -1.15
CCR4YAL021C SMC2P38989 1170 aaKnown RBP7.85□□□□□ -1.15
CCR4YAL021C UTP22P53254 1237 aaPredicted RBP7.85□□□□□ -1.15
CCR4YAL021C RSC3Q06639 885 aa7.85□□□□□ -1.15
CCR4YAL021C YDL124WQ07551 312 aaKnown RBP7.85□□□□□ -1.15
CCR4YAL021C SDH5Q08230 162 aa7.85□□□□□ -1.15
CCR4YAL021C CAT8P39113 1433 aa7.84□□□□□ -1.15
CCR4YAL021C HOM3P10869 527 aa7.84□□□□□ -1.15
CCR4YAL021C PEP7P32609 515 aa7.84□□□□□ -1.15
CCR4YAL021C GCN20P43535 752 aaKnown RBP7.84□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms