RNA–Protein interactions for RNA: YAL002W

VPS8, Transcript of Membrane-binding component of the CORVET complex, yeastyeast

Gene VPS8, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS8YAL002W TY1B-OLQ12273 1755 aa2.55□□□□□ -2
VPS8YAL002W TY1B-PLQ12414 1755 aaKnown RBP2.55□□□□□ -2
VPS8YAL002W FUS1P11710 512 aa2.55□□□□□ -2
VPS8YAL002W RAD53P22216 821 aa2.55□□□□□ -2
VPS8YAL002W FPS1P23900 669 aa2.55□□□□□ -2
VPS8YAL002W PER1P25625 357 aa2.55□□□□□ -2
VPS8YAL002W PRP19P32523 503 aaKnown RBP2.55□□□□□ -2
VPS8YAL002W BCK2P33306 851 aa2.55□□□□□ -2
VPS8YAL002W JSN1P47135 1091 aaKnown RBP RIP-Chip data2.55□□□□□ -2not detected
VPS8YAL002W YGL081WP53156 320 aa2.55□□□□□ -2
VPS8YAL002W RPL8AP17076 256 aaKnown RBP2.55□□□□□ -2
VPS8YAL002W TFC4P33339 1025 aa2.55□□□□□ -2
VPS8YAL002W YHR020WP38708 688 aaKnown RBP2.55□□□□□ -2
VPS8YAL002W YOR093CQ12275 1648 aa2.55□□□□□ -2
VPS8YAL002W TYS1P36421 394 aaKnown RBP2.55□□□□□ -2
VPS8YAL002W BAP2P38084 609 aa2.55□□□□□ -2
VPS8YAL002W SLS1P42900 643 aa2.55□□□□□ -2
VPS8YAL002W YNR029CP53729 429 aaKnown RBP2.55□□□□□ -2
VPS8YAL002W CTR9P89105 1077 aa2.55□□□□□ -2
VPS8YAL002W BNI1P41832 1953 aa2.55□□□□□ -2
VPS8YAL002W GBP2P25555 427 aaKnown RBP RIP-Chip data2.54□□□□□ -2not detected
VPS8YAL002W MSH2P25847 964 aa2.54□□□□□ -2
VPS8YAL002W YBR238CP38330 731 aaKnown RBP2.54□□□□□ -2
VPS8YAL002W ZDS1P50111 915 aaKnown RBP2.54□□□□□ -2
VPS8YAL002W YGR053CP53234 283 aa2.54□□□□□ -2
VPS8YAL002W ELA1P53861 379 aaPredicted RBP2.54□□□□□ -2
VPS8YAL002W MTC5Q03897 1148 aa2.54□□□□□ -2
VPS8YAL002W THI73Q07904 523 aa2.54□□□□□ -2
VPS8YAL002W CMR1Q12510 522 aaKnown RBP2.54□□□□□ -2
VPS8YAL002W RPS31P05759 152 aaKnown RBP2.54□□□□□ -2
VPS8YAL002W ERT1P38140 529 aa2.54□□□□□ -2
VPS8YAL002W ALG3P38179 458 aa2.54□□□□□ -2
VPS8YAL002W REI1P38344 393 aaPredicted RBP2.54□□□□□ -2
VPS8YAL002W PMC1P38929 1173 aaPredicted RBP2.54□□□□□ -2
VPS8YAL002W GDH3P39708 457 aa2.54□□□□□ -2
VPS8YAL002W UME1Q03010 460 aa2.54□□□□□ -2
VPS8YAL002W VMS1Q04311 632 aaKnown RBP2.54□□□□□ -2
VPS8YAL002W TMA7Q3E764 64 aaKnown RBP2.54□□□□□ -2
VPS8YAL002W MKK2P32491 506 aa2.54□□□□□ -2
VPS8YAL002W PIN4P34217 668 aaKnown RBP RIP-Chip data2.54□□□□□ -2not detected
VPS8YAL002W BET3P36149 193 aa2.54□□□□□ -2
VPS8YAL002W HSE1P38753 452 aa2.54□□□□□ -2
VPS8YAL002W YJR124CP47159 448 aa2.54□□□□□ -2
VPS8YAL002W IDI1P15496 288 aa2.53□□□□□ -2
VPS8YAL002W AFT1P22149 690 aa2.53□□□□□ -2
VPS8YAL002W TRX2P22803 104 aaKnown RBP2.53□□□□□ -2
VPS8YAL002W TED1P40533 473 aa2.53□□□□□ -2
VPS8YAL002W PMT3P47190 753 aa2.53□□□□□ -2
VPS8YAL002W UBP15P50101 1230 aa2.53□□□□□ -2
VPS8YAL002W PEX14P53112 341 aa2.53□□□□□ -2
VPS8YAL002W UTP22P53254 1237 aaPredicted RBP2.53□□□□□ -2
VPS8YAL002W UBP2Q01476 1272 aa2.53□□□□□ -2
VPS8YAL002W GLO4Q12320 285 aa2.53□□□□□ -2
VPS8YAL002W MSD1P15179 658 aaKnown RBP2.53□□□□□ -2
VPS8YAL002W ADD66P36040 267 aa2.53□□□□□ -2
VPS8YAL002W CNN1P43618 361 aa2.53□□□□□ -2
VPS8YAL002W NUP85P46673 744 aa2.53□□□□□ -2
VPS8YAL002W BFA1P47113 574 aa2.53□□□□□ -2
VPS8YAL002W SIW14P53965 281 aa2.53□□□□□ -2
VPS8YAL002W ADE12P80210 433 aaKnown RBP2.53□□□□□ -2
VPS8YAL002W LAP2Q10740 671 aa2.53□□□□□ -2
VPS8YAL002W RKM4Q12504 494 aa2.53□□□□□ -2
VPS8YAL002W LEU1P07264 779 aaKnown RBP2.53□□□□□ -2
VPS8YAL002W TY1A-LR4P0C2I8 440 aaKnown RBP2.53□□□□□ -2
VPS8YAL002W TY1A-DR6P0CX70 440 aa2.53□□□□□ -2
VPS8YAL002W TY1A-ER1P0CX71 440 aa2.53□□□□□ -2
VPS8YAL002W TY1A-LR2P0CX72 440 aa2.53□□□□□ -2
VPS8YAL002W TY1A-PLP0CX73 440 aa2.53□□□□□ -2
VPS8YAL002W TY1A-JR1P0CX74 440 aa2.53□□□□□ -2
VPS8YAL002W TY1A-LR3P0CX75 440 aa2.53□□□□□ -2
VPS8YAL002W TY1A-ML2P0CX76 440 aa2.53□□□□□ -2
VPS8YAL002W SHR5P41912 237 aa2.53□□□□□ -2
VPS8YAL002W MSB3P48566 633 aaPredicted RBP2.53□□□□□ -2
VPS8YAL002W CRR1Q05790 422 aa2.53□□□□□ -2
VPS8YAL002W PPM2Q08282 695 aa2.53□□□□□ -2
VPS8YAL002W TRE2Q08693 809 aa2.53□□□□□ -2
VPS8YAL002W TY1A-GR1Q12085 440 aa2.53□□□□□ -2
VPS8YAL002W SPO21Q12411 609 aa2.53□□□□□ -2
VPS8YAL002W TY1A-PR3Q6Q5H1 440 aaKnown RBP2.53□□□□□ -2
VPS8YAL002W TY1A-OLQ92392 440 aaKnown RBP2.53□□□□□ -2
VPS8YAL002W TY2B-LR1P0C2J3 1770 aa2.53□□□□□ -2.01
VPS8YAL002W TY2B-FP0CX63 1770 aa2.53□□□□□ -2.01
VPS8YAL002W TY2B-GR2P0CX64 1770 aa2.53□□□□□ -2.01
VPS8YAL002W TY2B-CP25384 1770 aa2.53□□□□□ -2.01
VPS8YAL002W TY2B-DR2Q03494 1770 aa2.53□□□□□ -2.01
VPS8YAL002W TY1B-DR1Q03855 1755 aa2.53□□□□□ -2.01
VPS8YAL002W TY2B-DR3Q07791 1770 aaKnown RBP2.53□□□□□ -2.01
VPS8YAL002W TY2B-OR1Q12113 1770 aa2.53□□□□□ -2.01
VPS8YAL002W TY2B-DR1Q12472 1770 aa2.53□□□□□ -2.01
VPS8YAL002W TY2B-OR2Q12501 1770 aa2.53□□□□□ -2.01
VPS8YAL002W ADE8P04161 214 aa2.52□□□□□ -2.01
VPS8YAL002W RPC31P17890 251 aa2.52□□□□□ -2.01
VPS8YAL002W YAR028WP39548 234 aa2.52□□□□□ -2.01
VPS8YAL002W SCW11P53189 542 aa2.52□□□□□ -2.01
VPS8YAL002W HBN1Q96VH4 193 aa2.52□□□□□ -2.01
VPS8YAL002W RPO21P04050 1733 aaKnown RBP2.52□□□□□ -2.01
VPS8YAL002W RPS9AO13516 197 aaKnown RBP2.52□□□□□ -2.01
VPS8YAL002W HNT2P49775 206 aa2.52□□□□□ -2.01
VPS8YAL002W YNL193WP53870 558 aa2.52□□□□□ -2.01
VPS8YAL002W TAF8Q03750 510 aa2.52□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 47 ms