RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 TEX14Q8IWB6 1497 aa9.52□□□□□ -0.89
SCFD1-212ENST00000554486 ST8SIA5O15466 376 aa9.51□□□□□ -0.89
SCFD1-212ENST00000554486 HNRNPMP52272 730 aaKnown RBP eCLIP9.51□□□□□ -0.89
SCFD1-212ENST00000554486 HPS1Q92902 700 aa9.51□□□□□ -0.89
SCFD1-212ENST00000554486 ALG2Q9H553 416 aa9.51□□□□□ -0.89
SCFD1-212ENST00000554486 GPSM3Q9Y4H4 160 aa9.51□□□□□ -0.89
SCFD1-212ENST00000554486 ARHGEF5Q12774 1597 aa9.5□□□□□ -0.89
SCFD1-212ENST00000554486 ABCC5O15440 1437 aa9.5□□□□□ -0.89
SCFD1-212ENST00000554486 DNMT1P26358 1616 aaKnown RBP9.5□□□□□ -0.89
SCFD1-212ENST00000554486 ARID5BQ14865 1188 aa9.5□□□□□ -0.89
SCFD1-212ENST00000554486 ADGRL1O94910 1474 aa9.5□□□□□ -0.89
SCFD1-212ENST00000554486 PTPRKQ15262 1439 aa9.49□□□□□ -0.89
SCFD1-212ENST00000554486 SCAPERQ9BY12 1400 aa9.49□□□□□ -0.89
SCFD1-212ENST00000554486 TRAPPC8Q9Y2L5 1435 aa9.49□□□□□ -0.89
SCFD1-212ENST00000554486 CDK15Q96Q40 435 aa9.49□□□□□ -0.89
SCFD1-212ENST00000554486 TLL2Q9Y6L7 1015 aa9.49□□□□□ -0.89
SCFD1-212ENST00000554486 CROCC2H7BZ55 1655 aa9.48□□□□□ -0.89
SCFD1-212ENST00000554486 DAPK1P53355 1430 aa9.48□□□□□ -0.89
SCFD1-212ENST00000554486 PTK2Q05397 1052 aa9.48□□□□□ -0.89
SCFD1-212ENST00000554486 ADAM32Q8TC27 787 aa9.48□□□□□ -0.89
SCFD1-212ENST00000554486 GLMNQ92990 594 aa9.48□□□□□ -0.89
SCFD1-212ENST00000554486 RICTORQ6R327 1708 aa9.48□□□□□ -0.89
SCFD1-212ENST00000554486 CCDC141Q6ZP82 1450 aa9.47□□□□□ -0.89
SCFD1-212ENST00000554486 COL17A1Q9UMD9 1497 aaPredicted RBP9.47□□□□□ -0.89
SCFD1-212ENST00000554486 MAGEB6P1A0A0J9YX57 407 aa9.47□□□□□ -0.89
SCFD1-212ENST00000554486 ITGAEP38570 1179 aa9.47□□□□□ -0.89
SCFD1-212ENST00000554486 HDGFL1Q5TGJ6 251 aa9.47□□□□□ -0.89
SCFD1-212ENST00000554486 WWC1Q8IX03 1113 aa9.47□□□□□ -0.89
SCFD1-212ENST00000554486 AFAP1Q8N556 730 aa9.47□□□□□ -0.89
SCFD1-212ENST00000554486 ARHGAP9Q9BRR9 750 aa9.47□□□□□ -0.89
SCFD1-212ENST00000554486 C1QTNF2Q9BXJ5 285 aa9.47□□□□□ -0.89
SCFD1-212ENST00000554486 POGZQ7Z3K3 1410 aa9.47□□□□□ -0.89
SCFD1-212ENST00000554486 DENND4BO75064 1496 aaPredicted RBP9.47□□□□□ -0.89
SCFD1-212ENST00000554486 FRMPD1Q5SYB0 1578 aa9.46□□□□□ -0.89
SCFD1-212ENST00000554486 ADH1CP00326 375 aa9.46□□□□□ -0.9
SCFD1-212ENST00000554486 NR5A1Q13285 461 aa9.46□□□□□ -0.9
SCFD1-212ENST00000554486 ERFEQ4G0M1 354 aa9.46□□□□□ -0.9
SCFD1-212ENST00000554486 ZBTB33Q86T24 672 aa9.46□□□□□ -0.9
SCFD1-212ENST00000554486 RAPGEF3O95398 923 aa9.45□□□□□ -0.9
SCFD1-212ENST00000554486 NNTQ13423 1086 aa9.45□□□□□ -0.9
SCFD1-212ENST00000554486 TRMT44Q8IYL2 757 aaKnown RBP9.45□□□□□ -0.9
SCFD1-212ENST00000554486 CARD14Q9BXL6 1004 aa9.45□□□□□ -0.9
SCFD1-212ENST00000554486 PCGF6Q9BYE7 350 aa9.45□□□□□ -0.9
SCFD1-212ENST00000554486 C9orf84Q5VXU9 1444 aa9.45□□□□□ -0.9
SCFD1-212ENST00000554486 ZNF518AQ6AHZ1 1483 aa9.45□□□□□ -0.9
SCFD1-212ENST00000554486 SHANK2Q9UPX8 1470 aa9.45□□□□□ -0.9
SCFD1-212ENST00000554486 KDM5CP41229 1560 aa9.45□□□□□ -0.9
SCFD1-212ENST00000554486 MAST1Q9Y2H9 1570 aa9.45□□□□□ -0.9
SCFD1-212ENST00000554486 CAPN5O15484 640 aaPredicted RBP9.44□□□□□ -0.9
SCFD1-212ENST00000554486 UCN2Q96RP3 112 aa9.44□□□□□ -0.9
SCFD1-212ENST00000554486 DACH1Q9UI36 760 aa9.44□□□□□ -0.9
SCFD1-212ENST00000554486 CHIC2Q9UKJ5 165 aa9.44□□□□□ -0.9
SCFD1-212ENST00000554486 CDV3Q9UKY7 258 aaKnown RBP9.44□□□□□ -0.9
SCFD1-212ENST00000554486 KIDINS220Q9ULH0 1771 aa9.43□□□□□ -0.9
SCFD1-212ENST00000554486 ADGBQ8N7X0 1667 aa9.43□□□□□ -0.9
SCFD1-212ENST00000554486 INO80Q9ULG1 1556 aaPredicted RBP9.43□□□□□ -0.9
SCFD1-212ENST00000554486 ADGRL2O95490 1459 aa9.43□□□□□ -0.9
SCFD1-212ENST00000554486 SPAG9O60271 1321 aaKnown RBP9.43□□□□□ -0.9
SCFD1-212ENST00000554486 TSPY4P0CV99 314 aa9.43□□□□□ -0.9
SCFD1-212ENST00000554486 TSPY10P0CW01 314 aa9.43□□□□□ -0.9
SCFD1-212ENST00000554486 VASH1Q7L8A9 365 aaPredicted RBP9.43□□□□□ -0.9
SCFD1-212ENST00000554486 CCDC82Q8N4S0 544 aa9.43□□□□□ -0.9
SCFD1-212ENST00000554486 SENP2Q9HC62 589 aa9.43□□□□□ -0.9
SCFD1-212ENST00000554486 ATP13A2Q9NQ11 1180 aa9.43□□□□□ -0.9
SCFD1-212ENST00000554486 MAP4K5Q9Y4K4 846 aa9.43□□□□□ -0.9
SCFD1-212ENST00000554486 ZMYM4Q5VZL5 1548 aa9.42□□□□□ -0.9
SCFD1-212ENST00000554486 ZFYVE16Q7Z3T8 1539 aa9.42□□□□□ -0.9
SCFD1-212ENST00000554486 NCOA1Q15788 1441 aa9.42□□□□□ -0.9
SCFD1-212ENST00000554486 ROCK1Q13464 1354 aa9.42□□□□□ -0.9
SCFD1-212ENST00000554486 SOX11P35716 441 aa9.42□□□□□ -0.9
SCFD1-212ENST00000554486 EIF4G2P78344 907 aaKnown RBP eCLIP9.42□□□□□ -0.9
SCFD1-212ENST00000554486 CALR3Q96L12 384 aaKnown RBP9.42□□□□□ -0.9
SCFD1-212ENST00000554486 KDM6BO15054 1643 aa9.42□□□□□ -0.9
SCFD1-212ENST00000554486 HECW2Q9P2P5 1572 aa9.41□□□□□ -0.9
SCFD1-212ENST00000554486 ATP7AQ04656 1500 aa9.41□□□□□ -0.9
SCFD1-212ENST00000554486 MLH3Q9UHC1 1453 aa9.41□□□□□ -0.9
SCFD1-212ENST00000554486 RTEL1-TNFRSF6BF6WH68 1400 aa9.41□□□□□ -0.9
SCFD1-212ENST00000554486 GRM5P41594 1212 aa9.41□□□□□ -0.9
SCFD1-212ENST00000554486 SLC10A4Q96EP9 437 aa9.41□□□□□ -0.9
SCFD1-212ENST00000554486 GMPR2Q9P2T1 348 aaKnown RBP9.41□□□□□ -0.9
SCFD1-212ENST00000554486 PLXNC1O60486 1568 aa9.41□□□□□ -0.9
SCFD1-212ENST00000554486 ANKRD30AQ9BXX3 1397 aa9.4□□□□□ -0.9
SCFD1-212ENST00000554486 C11orf95C9JLR9 678 aaPredicted RBP9.4□□□□□ -0.9
SCFD1-212ENST00000554486 PIK3CDO00329 1044 aa9.4□□□□□ -0.9
SCFD1-212ENST00000554486 WDR4P57081 412 aaKnown RBP9.4□□□□□ -0.9
SCFD1-212ENST00000554486 SEMA3FQ13275 785 aa9.4□□□□□ -0.9
SCFD1-212ENST00000554486 PHTF2Q8N3S3 785 aa9.4□□□□□ -0.9
SCFD1-212ENST00000554486 KIFC2Q96AC6 838 aa9.4□□□□□ -0.9
SCFD1-212ENST00000554486 RRP7BPQ9NSQ0 103 aa9.4□□□□□ -0.9
SCFD1-212ENST00000554486 CEP126Q9P2H0 1117 aa9.4□□□□□ -0.9
SCFD1-212ENST00000554486 PCDHB9Q9Y5E1 797 aa9.4□□□□□ -0.9
SCFD1-212ENST00000554486 HFM1A2PYH4 1435 aa9.39□□□□□ -0.91
SCFD1-212ENST00000554486 NAIPQ13075 1403 aa9.39□□□□□ -0.91
SCFD1-212ENST00000554486 KIF15Q9NS87 1388 aa9.39□□□□□ -0.91
SCFD1-212ENST00000554486 GCC2Q8IWJ2 1684 aa9.39□□□□□ -0.91
SCFD1-212ENST00000554486 ABCA6Q8N139 1617 aa9.39□□□□□ -0.91
SCFD1-212ENST00000554486 POTECB2RU33 542 aa9.39□□□□□ -0.91
SCFD1-212ENST00000554486 YEATS2Q9ULM3 1422 aa9.39□□□□□ -0.91
SCFD1-212ENST00000554486 DIP2CQ9Y2E4 1556 aa9.38□□□□□ -0.91
SCFD1-212ENST00000554486 MAGI2Q86UL8 1455 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms