RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-225ENST00000524141 STAG3Q9UJ98 1225 aa12.42□□□□□ -0.42
SPIDR-225ENST00000524141 SALL3Q9BXA9 1300 aa12.42□□□□□ -0.42
SPIDR-225ENST00000524141 C3P01024 1663 aa12.42□□□□□ -0.42
SPIDR-225ENST00000524141 ITSN1Q15811 1721 aa12.42□□□□□ -0.42
SPIDR-225ENST00000524141 WASLO00401 505 aaPredicted RBP12.42□□□□□ -0.42
SPIDR-225ENST00000524141 ARHGEF10O15013 1369 aa12.42□□□□□ -0.42
SPIDR-225ENST00000524141 GNAI2P04899 355 aa12.42□□□□□ -0.42
SPIDR-225ENST00000524141 MX1P20591 662 aa12.42□□□□□ -0.42
SPIDR-225ENST00000524141 DNTTIP2Q5QJE6 756 aaKnown RBP12.42□□□□□ -0.42
SPIDR-225ENST00000524141 TMEM87AQ8NBN3 555 aa12.42□□□□□ -0.42
SPIDR-225ENST00000524141 ANO2Q9NQ90 1003 aa12.42□□□□□ -0.42
SPIDR-225ENST00000524141 AKAP12Q02952 1782 aa12.42□□□□□ -0.42
SPIDR-225ENST00000524141 SLC4A2P04920 1241 aa12.41□□□□□ -0.42
SPIDR-225ENST00000524141 KRT24Q2M2I5 525 aa12.41□□□□□ -0.42
SPIDR-225ENST00000524141 WAPLQ7Z5K2 1190 aa12.41□□□□□ -0.42
SPIDR-225ENST00000524141 CCDC183Q5T5S1 534 aa12.41□□□□□ -0.42
SPIDR-225ENST00000524141 CHMLP26374 656 aa12.41□□□□□ -0.42
SPIDR-225ENST00000524141 CCDC94Q9BW85 323 aaPredicted RBP12.41□□□□□ -0.42
SPIDR-225ENST00000524141 CPS1P31327 1500 aa12.4□□□□□ -0.42
SPIDR-225ENST00000524141 AOX1Q06278 1338 aa12.4□□□□□ -0.42
SPIDR-225ENST00000524141 GTF2F1P35269 517 aaKnown RBP eCLIP12.4□□□□□ -0.422e-13■■■■□ 26.1
SPIDR-225ENST00000524141 SULT6B1Q6IMI4 303 aa12.4□□□□□ -0.42
SPIDR-225ENST00000524141 PRDM4Q9UKN5 801 aa12.4□□□□□ -0.42
SPIDR-225ENST00000524141 USP48Q86UV5 1035 aa12.4□□□□□ -0.43
SPIDR-225ENST00000524141 ZRANB1Q9UGI0 708 aa12.4□□□□□ -0.43
SPIDR-225ENST00000524141 STAP2Q9UGK3 403 aa12.4□□□□□ -0.43
SPIDR-225ENST00000524141 PALD1Q9ULE6 856 aa12.4□□□□□ -0.43
SPIDR-225ENST00000524141 TCHHQ07283 1943 aa12.39□□□□□ -0.43
SPIDR-225ENST00000524141 GNAI3P08754 354 aa12.39□□□□□ -0.43
SPIDR-225ENST00000524141 SLC4A10Q6U841 1118 aa12.39□□□□□ -0.43
SPIDR-225ENST00000524141 CCDC61Q9Y6R9 512 aa12.39□□□□□ -0.43
SPIDR-225ENST00000524141 TRIM6-TRIM34B2RNG4 842 aa12.39□□□□□ -0.43
SPIDR-225ENST00000524141 EIF4A2Q14240 407 aaKnown RBP12.39□□□□□ -0.43
SPIDR-225ENST00000524141 MCM10Q7L590 875 aa12.39□□□□□ -0.43
SPIDR-225ENST00000524141 EXOC6BQ9Y2D4 811 aa12.39□□□□□ -0.43
SPIDR-225ENST00000524141 CRB1P82279 1406 aa12.39□□□□□ -0.43
SPIDR-225ENST00000524141 NOLC1Q14978 699 aaKnown RBP eCLIP12.38□□□□□ -0.43
SPIDR-225ENST00000524141 NUDT16Q96DE0 195 aaKnown RBP12.38□□□□□ -0.43
SPIDR-225ENST00000524141 ATP6V1DQ9Y5K8 247 aa12.38□□□□□ -0.43
SPIDR-225ENST00000524141 PLEKHG5O94827 1062 aa12.38□□□□□ -0.43
SPIDR-225ENST00000524141 AEBP1Q8IUX7 1158 aa12.38□□□□□ -0.43
SPIDR-225ENST00000524141 RILPL2Q969X0 211 aa12.38□□□□□ -0.43
SPIDR-225ENST00000524141 GADD45BO75293 160 aaPredicted RBP12.37□□□□□ -0.43
SPIDR-225ENST00000524141 UBE2HP62256 183 aa12.37□□□□□ -0.43
SPIDR-225ENST00000524141 NOL8Q76FK4 1167 aaKnown RBP12.37□□□□□ -0.43
SPIDR-225ENST00000524141 SPTLC3Q9NUV7 552 aa12.37□□□□□ -0.43
SPIDR-225ENST00000524141 USP25Q9UHP3 1055 aa12.37□□□□□ -0.43
SPIDR-225ENST00000524141 RGPD1P0DJD0 1748 aa12.37□□□□□ -0.43
SPIDR-225ENST00000524141 CACNA1FO60840 1977 aa12.37□□□□□ -0.43
SPIDR-225ENST00000524141 STK31Q9BXU1 1019 aa12.37□□□□□ -0.43
SPIDR-225ENST00000524141 RPAP1Q9BWH6 1393 aaPredicted RBP12.37□□□□□ -0.43
SPIDR-225ENST00000524141 ADCY5O95622 1261 aa12.36□□□□□ -0.43
SPIDR-225ENST00000524141 TPM3P06753 285 aa12.36□□□□□ -0.43
SPIDR-225ENST00000524141 HSPA4P34932 840 aa12.36□□□□□ -0.43
SPIDR-225ENST00000524141 UPF3BQ9BZI7 483 aaKnown RBP12.36□□□□□ -0.43
SPIDR-225ENST00000524141 GDPD2Q9HCC8 539 aa12.36□□□□□ -0.43
SPIDR-225ENST00000524141 A2ML1A8K2U0 1454 aa12.36□□□□□ -0.43
SPIDR-225ENST00000524141 TTC21BQ7Z4L5 1316 aa12.36□□□□□ -0.43
SPIDR-225ENST00000524141 N4BP2Q86UW6 1770 aaPredicted RBP12.36□□□□□ -0.43
SPIDR-225ENST00000524141 SPATA31D1Q6ZQQ2 1576 aa12.36□□□□□ -0.43
SPIDR-225ENST00000524141 ATP8B2P98198 1209 aa12.36□□□□□ -0.43
SPIDR-225ENST00000524141 FKBP5Q13451 457 aaPredicted RBP12.36□□□□□ -0.43
SPIDR-225ENST00000524141 TSHZ3Q63HK5 1081 aa12.36□□□□□ -0.43
SPIDR-225ENST00000524141 F6X3S4 739 aa12.35□□□□□ -0.43
SPIDR-225ENST00000524141 FBXO31Q5XUX0 539 aaPredicted RBP12.35□□□□□ -0.43
SPIDR-225ENST00000524141 TSPYL4Q9UJ04 414 aa12.35□□□□□ -0.43
SPIDR-225ENST00000524141 KIF3AQ9Y496 699 aa12.35□□□□□ -0.43
SPIDR-225ENST00000524141 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.35□□□□□ -0.43
SPIDR-225ENST00000524141 ZSCAN22P10073 491 aaPredicted RBP12.35□□□□□ -0.43
SPIDR-225ENST00000524141 UTP14CQ5TAP6 766 aaKnown RBP12.35□□□□□ -0.43
SPIDR-225ENST00000524141 RTF1Q92541 710 aaKnown RBP12.35□□□□□ -0.43
SPIDR-225ENST00000524141 KDM4AO75164 1064 aa12.34□□□□□ -0.43
SPIDR-225ENST00000524141 FOXD4L6Q3SYB3 417 aaPredicted RBP12.34□□□□□ -0.43
SPIDR-225ENST00000524141 FOXD4L3Q6VB84 417 aaPredicted RBP12.34□□□□□ -0.43
SPIDR-225ENST00000524141 G2E3Q7L622 706 aa12.34□□□□□ -0.43
SPIDR-225ENST00000524141 SIRT1Q96EB6 747 aa12.34□□□□□ -0.43
SPIDR-225ENST00000524141 RAD50Q92878 1312 aa12.34□□□□□ -0.43
SPIDR-225ENST00000524141 XRN1Q8IZH2 1706 aaKnown RBP12.34□□□□□ -0.43
SPIDR-225ENST00000524141 HCLS1P14317 486 aaPredicted RBP12.34□□□□□ -0.43
SPIDR-225ENST00000524141 DIAPH3Q9NSV4 1193 aa12.34□□□□□ -0.43
SPIDR-225ENST00000524141 PXDNLA1KZ92 1463 aa12.34□□□□□ -0.43
SPIDR-225ENST00000524141 NALCNQ8IZF0 1738 aa12.33□□□□□ -0.43
SPIDR-225ENST00000524141 OVOS2A0A0J9YW53 1432 aa12.33□□□□□ -0.44
SPIDR-225ENST00000524141 TECPR2O15040 1411 aa12.33□□□□□ -0.44
SPIDR-225ENST00000524141 OVOS2Q6IE36 1432 aa12.33□□□□□ -0.44
SPIDR-225ENST00000524141 STX6O43752 255 aa12.33□□□□□ -0.44
SPIDR-225ENST00000524141 CHAF1AQ13111 956 aaPredicted RBP12.33□□□□□ -0.44
SPIDR-225ENST00000524141 TTC12Q9H892 705 aaPredicted RBP12.33□□□□□ -0.44
SPIDR-225ENST00000524141 FAM208AQ9UK61 1670 aaKnown RBP12.33□□□□□ -0.44
SPIDR-225ENST00000524141 SOS1Q07889 1333 aaPredicted RBP12.33□□□□□ -0.44
SPIDR-225ENST00000524141 NRXN3Q9Y4C0 1643 aa12.33□□□□□ -0.44
SPIDR-225ENST00000524141 PNMA6EA0A0J9YXQ4 647 aa12.33□□□□□ -0.44
SPIDR-225ENST00000524141 PPP6R1Q9UPN7 881 aa12.33□□□□□ -0.44
SPIDR-225ENST00000524141 CNPY2Q9Y2B0 182 aa12.33□□□□□ -0.44
SPIDR-225ENST00000524141 GOLGA6L6A8MZA4 724 aa12.32□□□□□ -0.44
SPIDR-225ENST00000524141 FLIIQ13045 1269 aa12.32□□□□□ -0.44
SPIDR-225ENST00000524141 CCDC30Q5VVM6 783 aa12.32□□□□□ -0.44
SPIDR-225ENST00000524141 ARID3AQ99856 593 aa12.32□□□□□ -0.44
SPIDR-225ENST00000524141 LIMCH1Q9UPQ0 1083 aa12.32□□□□□ -0.44
SPIDR-225ENST00000524141 RAB11FIP3O75154 756 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms