RNA–Protein interactions for RNA: ENST00000466213.5

SFPQ-203, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 1 (best)

Gene SFPQ, Length 1,431 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-203ENST00000466213 KIAA1522Q9P206 1035 aaPredicted RBP8.85□□□□□ -0.99
SFPQ-203ENST00000466213 PCDHB3Q9Y5E6 796 aa8.85□□□□□ -0.99
SFPQ-203ENST00000466213 SPAG9O60271 1321 aaKnown RBP8.84□□□□□ -0.99
SFPQ-203ENST00000466213 ARAP3Q8WWN8 1544 aa8.84□□□□□ -0.99
SFPQ-203ENST00000466213 ADGRL1O94910 1474 aa8.84□□□□□ -0.99
SFPQ-203ENST00000466213 PPP4CP60510 307 aa8.84□□□□□ -0.99
SFPQ-203ENST00000466213 ADAM32Q8TC27 787 aa8.84□□□□□ -0.99
SFPQ-203ENST00000466213 MARVELD3Q96A59 401 aa8.84□□□□□ -0.99
SFPQ-203ENST00000466213 PRDM9Q9NQV7 894 aa8.84□□□□□ -0.99
SFPQ-203ENST00000466213 KIAA1024Q9UPX6 916 aa8.84□□□□□ -0.99
SFPQ-203ENST00000466213 HPS5Q9UPZ3 1129 aa8.84□□□□□ -0.99
SFPQ-203ENST00000466213 TTC37Q6PGP7 1564 aa8.84□□□□□ -0.99
SFPQ-203ENST00000466213 ITSN2Q9NZM3 1697 aa8.83□□□□□ -1
SFPQ-203ENST00000466213 DENND4BO75064 1496 aaPredicted RBP8.83□□□□□ -1
SFPQ-203ENST00000466213 SOWAHBA6NEL2 793 aa8.83□□□□□ -1
SFPQ-203ENST00000466213 ST18O60284 1047 aa8.83□□□□□ -1
SFPQ-203ENST00000466213 LZTS3O60299 673 aaPredicted RBP8.83□□□□□ -1
SFPQ-203ENST00000466213 NR1I2O75469 434 aa8.83□□□□□ -1
SFPQ-203ENST00000466213 BCAMP50895 628 aa8.83□□□□□ -1
SFPQ-203ENST00000466213 MMP16P51512 607 aa8.83□□□□□ -1
SFPQ-203ENST00000466213 MSS51Q4VC12 460 aa8.83□□□□□ -1
SFPQ-203ENST00000466213 AFAP1Q8N556 730 aa8.83□□□□□ -1
SFPQ-203ENST00000466213 CCDC85AQ96PX6 553 aaPredicted RBP8.83□□□□□ -1
SFPQ-203ENST00000466213 NUDT12Q9BQG2 462 aa8.83□□□□□ -1
SFPQ-203ENST00000466213 KIAA1107Q9UPP5 1409 aa8.83□□□□□ -1
SFPQ-203ENST00000466213 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.83□□□□□ -1
SFPQ-203ENST00000466213 FAM205CA6NFA0 338 aa8.82□□□□□ -1
SFPQ-203ENST00000466213 RAPGEF3O95398 923 aa8.82□□□□□ -1
SFPQ-203ENST00000466213 MCCD1P59942 119 aaPredicted RBP8.82□□□□□ -1
SFPQ-203ENST00000466213 PTCRAQ6ISU1 281 aaPredicted RBP8.82□□□□□ -1
SFPQ-203ENST00000466213 ADGRD1Q6QNK2 874 aa8.82□□□□□ -1
SFPQ-203ENST00000466213 GPKOWQ92917 476 aaPredicted RBP eCLIP8.82□□□□□ -1
SFPQ-203ENST00000466213 ZNF594Q96JF6 807 aaPredicted RBP8.82□□□□□ -1
SFPQ-203ENST00000466213 CFAP74Q9C0B2 1584 aa8.82□□□□□ -1
SFPQ-203ENST00000466213 MYO5CQ9NQX4 1742 aa8.82□□□□□ -1
SFPQ-203ENST00000466213 CAMSAP2Q08AD1 1489 aa8.82□□□□□ -1
SFPQ-203ENST00000466213 EML3Q32P44 896 aa8.81□□□□□ -1
SFPQ-203ENST00000466213 MAP7D1Q3KQU3 841 aa8.81□□□□□ -1
SFPQ-203ENST00000466213 RRBP1Q9P2E9 1410 aaKnown RBP8.81□□□□□ -1
SFPQ-203ENST00000466213 EMP3P54852 163 aa8.8□□□□□ -1
SFPQ-203ENST00000466213 SWI5Q1ZZU3 235 aa8.8□□□□□ -1
SFPQ-203ENST00000466213 SH3BP5LQ7L8J4 393 aa8.8□□□□□ -1
SFPQ-203ENST00000466213 ARMC2Q8NEN0 867 aa8.8□□□□□ -1
SFPQ-203ENST00000466213 DNAAF2Q9NVR5 837 aaKnown RBP8.8□□□□□ -1
SFPQ-203ENST00000466213 PREX2Q70Z35 1606 aa8.8□□□□□ -1
SFPQ-203ENST00000466213 MAP3K4Q9Y6R4 1608 aa8.8□□□□□ -1
SFPQ-203ENST00000466213 PTPN23Q9H3S7 1636 aa8.8□□□□□ -1
SFPQ-203ENST00000466213 NEFLP07196 543 aa8.8□□□□□ -1
SFPQ-203ENST00000466213 OCLNQ16625 522 aa8.8□□□□□ -1
SFPQ-203ENST00000466213 CC2D2BQ6DHV5 1058 aa8.8□□□□□ -1
SFPQ-203ENST00000466213 C1orf216Q8TAB5 229 aa8.8□□□□□ -1
SFPQ-203ENST00000466213 PSMD1Q99460 953 aa8.8□□□□□ -1
SFPQ-203ENST00000466213 ARHGAP9Q9BRR9 750 aa8.8□□□□□ -1
SFPQ-203ENST00000466213 PCGF6Q9BYE7 350 aa8.8□□□□□ -1
SFPQ-203ENST00000466213 CWC22Q9HCG8 908 aaKnown RBP8.8□□□□□ -1
SFPQ-203ENST00000466213 TSR3Q9UJK0 312 aaKnown RBP8.8□□□□□ -1
SFPQ-203ENST00000466213 ANKRD30AQ9BXX3 1397 aa8.79□□□□□ -1
SFPQ-203ENST00000466213 TSPOAP1O95153 1857 aa8.79□□□□□ -1
SFPQ-203ENST00000466213 ZNF16P17020 682 aaPredicted RBP8.79□□□□□ -1
SFPQ-203ENST00000466213 TAS1R3Q7RTX0 852 aa8.79□□□□□ -1
SFPQ-203ENST00000466213 SIX5Q8N196 739 aa8.79□□□□□ -1
SFPQ-203ENST00000466213 LARGE2Q8N3Y3 721 aa8.79□□□□□ -1
SFPQ-203ENST00000466213 ANKK1Q8NFD2 765 aa8.79□□□□□ -1
SFPQ-203ENST00000466213 SPSB2Q99619 263 aa8.79□□□□□ -1
SFPQ-203ENST00000466213 RRP7BPQ9NSQ0 103 aa8.79□□□□□ -1
SFPQ-203ENST00000466213 TCOF1Q13428 1488 aaKnown RBP8.79□□□□□ -1
SFPQ-203ENST00000466213 ZNF518AQ6AHZ1 1483 aa8.79□□□□□ -1
SFPQ-203ENST00000466213 CCDC141Q6ZP82 1450 aa8.79□□□□□ -1
SFPQ-203ENST00000466213 ARID4BQ4LE39 1312 aaPredicted RBP8.78□□□□□ -1
SFPQ-203ENST00000466213 PRMT3O60678 531 aa8.78□□□□□ -1
SFPQ-203ENST00000466213 GIGYF1O75420 1035 aaPredicted RBP8.78□□□□□ -1
SFPQ-203ENST00000466213 ERCC3P19447 782 aa8.78□□□□□ -1
SFPQ-203ENST00000466213 MARSP56192 900 aaKnown RBP8.78□□□□□ -1
SFPQ-203ENST00000466213 LSM11P83369 360 aaKnown RBP eCLIP8.78□□□□□ -11e-7■■□□□ 11.8
SFPQ-203ENST00000466213 NBPF14Q5TI25 921 aa8.78□□□□□ -1
SFPQ-203ENST00000466213 FAM163AQ96GL9 167 aaPredicted RBP8.78□□□□□ -1
SFPQ-203ENST00000466213 PRIMPOLQ96LW4 560 aa8.78□□□□□ -1
SFPQ-203ENST00000466213 NOD1Q9Y239 953 aa8.78□□□□□ -1
SFPQ-203ENST00000466213 CDC42BPAQ5VT25 1732 aa8.78□□□□□ -1
SFPQ-203ENST00000466213 ECM1Q16610 540 aa8.77□□□□□ -1.01
SFPQ-203ENST00000466213 TICAM2Q86XR7 235 aa8.77□□□□□ -1.01
SFPQ-203ENST00000466213 TRIM50Q86XT4 487 aa8.77□□□□□ -1.01
SFPQ-203ENST00000466213 MRRFQ96E11 262 aaKnown RBP8.77□□□□□ -1.01
SFPQ-203ENST00000466213 UNC93B1Q9H1C4 597 aa8.77□□□□□ -1.01
SFPQ-203ENST00000466213 SYCP2Q9BX26 1530 aa8.77□□□□□ -1.01
SFPQ-203ENST00000466213 DAPK1P53355 1430 aa8.77□□□□□ -1.01
SFPQ-203ENST00000466213 POGZQ7Z3K3 1410 aa8.77□□□□□ -1.01
SFPQ-203ENST00000466213 TRAPPC8Q9Y2L5 1435 aa8.77□□□□□ -1.01
SFPQ-203ENST00000466213 KIF13AQ9H1H9 1805 aa8.76□□□□□ -1.01
SFPQ-203ENST00000466213 LGR5O75473 907 aa8.76□□□□□ -1.01
SFPQ-203ENST00000466213 CLSTN1O94985 981 aa8.76□□□□□ -1.01
SFPQ-203ENST00000466213 SH3RF1Q7Z6J0 888 aa8.76□□□□□ -1.01
SFPQ-203ENST00000466213 NPAS4Q8IUM7 802 aa8.76□□□□□ -1.01
SFPQ-203ENST00000466213 ZNF592Q92610 1267 aa8.76□□□□□ -1.01
SFPQ-203ENST00000466213 SIRT1Q96EB6 747 aa8.76□□□□□ -1.01
SFPQ-203ENST00000466213 ESF1Q9H501 851 aaKnown RBP8.76□□□□□ -1.01
SFPQ-203ENST00000466213 WBP1LQ9NX94 342 aa8.76□□□□□ -1.01
SFPQ-203ENST00000466213 CXXC1Q9P0U4 656 aaPredicted RBP8.76□□□□□ -1.01
SFPQ-203ENST00000466213 PCDHGA11Q9Y5H2 935 aa8.76□□□□□ -1.01
SFPQ-203ENST00000466213 ABCC5O15440 1437 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms