RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 MX1P20591 662 aa19.55■□□□□ 0.72
SFXN1-201ENST00000321442 CCDC83Q8IWF9 413 aa19.55■□□□□ 0.72
SFXN1-201ENST00000321442 MNS1Q8NEH6 495 aa19.55■□□□□ 0.72
SFXN1-201ENST00000321442 RASSF8Q8NHQ8 419 aa19.55■□□□□ 0.72
SFXN1-201ENST00000321442 ASXL1Q8IXJ9 1541 aa19.54■□□□□ 0.72
SFXN1-201ENST00000321442 ZHX1Q9UKY1 873 aaPredicted RBP19.54■□□□□ 0.72
SFXN1-201ENST00000321442 APPP05067 770 aa19.54■□□□□ 0.72
SFXN1-201ENST00000321442 PSMA5P28066 241 aa19.54■□□□□ 0.72
SFXN1-201ENST00000321442 SMC5Q8IY18 1101 aa19.54■□□□□ 0.72
SFXN1-201ENST00000321442 KINO60870 393 aaKnown RBP19.53■□□□□ 0.72
SFXN1-201ENST00000321442 TPM3P06753 285 aa19.53■□□□□ 0.72
SFXN1-201ENST00000321442 SDSP20132 328 aa19.53■□□□□ 0.72
SFXN1-201ENST00000321442 CCDC112Q8NEF3 446 aa19.53■□□□□ 0.72
SFXN1-201ENST00000321442 CCDC34Q96HJ3 373 aa19.53■□□□□ 0.72
SFXN1-201ENST00000321442 CASTP20810 708 aaKnown RBP19.53■□□□□ 0.72
SFXN1-201ENST00000321442 ZGPATQ8N5A5 531 aaKnown RBP19.53■□□□□ 0.72
SFXN1-201ENST00000321442 C8orf58Q8NAV2 365 aa19.53■□□□□ 0.72
SFXN1-201ENST00000321442 KCNH5Q8NCM2 988 aa19.53■□□□□ 0.72
SFXN1-201ENST00000321442 GCC2Q8IWJ2 1684 aa19.53■□□□□ 0.72
SFXN1-201ENST00000321442 GOLGA6L1Q8N7Z2 621 aa19.53■□□□□ 0.72
SFXN1-201ENST00000321442 SRCIN1Q9C0H9 1055 aa19.53■□□□□ 0.72
SFXN1-201ENST00000321442 SLC39A6Q13433 755 aa19.52■□□□□ 0.72
SFXN1-201ENST00000321442 RAB3GAP1Q15042 981 aa19.52■□□□□ 0.72
SFXN1-201ENST00000321442 PDCL2Q8N4E4 241 aa19.52■□□□□ 0.72
SFXN1-201ENST00000321442 ABCC11Q96J66 1382 aa19.52■□□□□ 0.72
SFXN1-201ENST00000321442 DNAJC2Q99543 621 aaKnown RBP19.52■□□□□ 0.72
SFXN1-201ENST00000321442 COL17A1Q9UMD9 1497 aaPredicted RBP19.52■□□□□ 0.71
SFXN1-201ENST00000321442 HCLS1P14317 486 aaPredicted RBP19.52■□□□□ 0.71
SFXN1-201ENST00000321442 ZBTB40Q9NUA8 1239 aa19.52■□□□□ 0.71
SFXN1-201ENST00000321442 CDC42BPAQ5VT25 1732 aa19.51■□□□□ 0.71
SFXN1-201ENST00000321442 SMC2O95347 1197 aa19.51■□□□□ 0.71
SFXN1-201ENST00000321442 SYNE3Q6ZMZ3 975 aa19.51■□□□□ 0.71
SFXN1-201ENST00000321442 SNX21Q969T3 373 aa19.51■□□□□ 0.71
SFXN1-201ENST00000321442 MAP3K19Q56UN5 1328 aa19.51■□□□□ 0.71
SFXN1-201ENST00000321442 TTC22Q5TAA0 569 aa19.51■□□□□ 0.71
SFXN1-201ENST00000321442 ANKRD24Q8TF21 1146 aa19.51■□□□□ 0.71
SFXN1-201ENST00000321442 NUP62CLQ9H1M0 184 aa19.51■□□□□ 0.71
SFXN1-201ENST00000321442 PDRG1Q9NUG6 133 aa19.5■□□□□ 0.71
SFXN1-201ENST00000321442 TMX3Q96JJ7 454 aa19.5■□□□□ 0.71
SFXN1-201ENST00000321442 ABCC1P33527 1531 aa19.5■□□□□ 0.71
SFXN1-201ENST00000321442 CPLX2Q6PUV4 134 aaKnown RBP19.5■□□□□ 0.71
SFXN1-201ENST00000321442 MEIS3Q99687 375 aa19.49■□□□□ 0.71
SFXN1-201ENST00000321442 METP08581 1390 aa19.49■□□□□ 0.71
SFXN1-201ENST00000321442 CKAP2LQ8IYA6 745 aa19.49■□□□□ 0.71
SFXN1-201ENST00000321442 SPATA32Q96LK8 384 aa19.49■□□□□ 0.71
SFXN1-201ENST00000321442 ARHGEF5Q12774 1597 aa19.49■□□□□ 0.71
SFXN1-201ENST00000321442 DDX11Q96FC9 970 aa19.49■□□□□ 0.71
SFXN1-201ENST00000321442 EYA1Q99502 592 aa19.49■□□□□ 0.71
SFXN1-201ENST00000321442 ADCY5O95622 1261 aa19.48■□□□□ 0.71
SFXN1-201ENST00000321442 MTHFSDQ2M296 383 aaKnown RBP19.48■□□□□ 0.71
SFXN1-201ENST00000321442 BLOC1S2Q6QNY1 142 aa19.48■□□□□ 0.71
SFXN1-201ENST00000321442 PDILTQ8N807 584 aa19.48■□□□□ 0.71
SFXN1-201ENST00000321442 SPG7Q9UQ90 795 aa19.48■□□□□ 0.71
SFXN1-201ENST00000321442 TAF7Q15545 349 aaPredicted RBP19.48■□□□□ 0.71
SFXN1-201ENST00000321442 PRPF40BQ6NWY9 871 aaKnown RBP19.47■□□□□ 0.71
SFXN1-201ENST00000321442 TTC12Q9H892 705 aaPredicted RBP19.47■□□□□ 0.71
SFXN1-201ENST00000321442 WASHC4Q2M389 1173 aa19.47■□□□□ 0.71
SFXN1-201ENST00000321442 SPDYE4A6NLX3 237 aa19.47■□□□□ 0.71
SFXN1-201ENST00000321442 ME1P48163 572 aa19.47■□□□□ 0.71
SFXN1-201ENST00000321442 MAPK8IP2Q13387 824 aaPredicted RBP19.47■□□□□ 0.71
SFXN1-201ENST00000321442 FAM177A1Q8N128 213 aaPredicted RBP19.47■□□□□ 0.71
SFXN1-201ENST00000321442 ATP2B1P20020 1258 aa19.46■□□□□ 0.71
SFXN1-201ENST00000321442 TFIP11Q9UBB9 837 aaKnown RBP19.46■□□□□ 0.71
SFXN1-201ENST00000321442 TBX22Q9Y458 520 aa19.46■□□□□ 0.71
SFXN1-201ENST00000321442 LRRIQ1Q96JM4 1722 aa19.46■□□□□ 0.71
SFXN1-201ENST00000321442 TEX35Q5T0J7 233 aa19.46■□□□□ 0.71
SFXN1-201ENST00000321442 CCDC183Q5T5S1 534 aa19.46■□□□□ 0.71
SFXN1-201ENST00000321442 LRSAM1Q6UWE0 723 aa19.46■□□□□ 0.71
SFXN1-201ENST00000321442 AACSQ86V21 672 aa19.46■□□□□ 0.71
SFXN1-201ENST00000321442 MAP3K11Q16584 847 aa19.46■□□□□ 0.71
SFXN1-201ENST00000321442 CADPS2Q86UW7 1296 aa19.46■□□□□ 0.71
SFXN1-201ENST00000321442 C16orf45Q96MC5 204 aaPredicted RBP19.46■□□□□ 0.71
SFXN1-201ENST00000321442 LRRFIP2Q9Y608 721 aaKnown RBP19.46■□□□□ 0.71
SFXN1-201ENST00000321442 POLR3AO14802 1390 aaPredicted RBP19.45■□□□□ 0.7
SFXN1-201ENST00000321442 GIMAP6Q6P9H5 292 aa19.45■□□□□ 0.7
SFXN1-201ENST00000321442 NEO1Q92859 1461 aa19.45■□□□□ 0.7
SFXN1-201ENST00000321442 PREX2Q70Z35 1606 aa19.45■□□□□ 0.7
SFXN1-201ENST00000321442 GCP02774 474 aa19.45■□□□□ 0.7
SFXN1-201ENST00000321442 STK11IPQ8N1F8 1099 aa19.45■□□□□ 0.7
SFXN1-201ENST00000321442 NAT10Q9H0A0 1025 aaKnown RBP19.45■□□□□ 0.7
SFXN1-201ENST00000321442 TRIM29Q14134 588 aa19.45■□□□□ 0.7
SFXN1-201ENST00000321442 TRDNQ13061 729 aa19.44■□□□□ 0.7
SFXN1-201ENST00000321442 ARGLU1Q9NWB6 273 aaPredicted RBP19.44■□□□□ 0.7
SFXN1-201ENST00000321442 ZKSCAN5Q9Y2L8 839 aa19.44■□□□□ 0.7
SFXN1-201ENST00000321442 MAGI2Q86UL8 1455 aa19.43■□□□□ 0.7
SFXN1-201ENST00000321442 PIK3C2GO75747 1445 aa19.43■□□□□ 0.7
SFXN1-201ENST00000321442 TTLL5Q6EMB2 1281 aa19.43■□□□□ 0.7
SFXN1-201ENST00000321442 RALYLQ86SE5 291 aaKnown RBP19.43■□□□□ 0.7
SFXN1-201ENST00000321442 ADGBQ8N7X0 1667 aa19.43■□□□□ 0.7
SFXN1-201ENST00000321442 PRDM15P57071 1507 aaPredicted RBP19.43■□□□□ 0.7
SFXN1-201ENST00000321442 BICDL1Q6ZP65 573 aa19.43■□□□□ 0.7
SFXN1-201ENST00000321442 CHMP4CQ96CF2 233 aa19.43■□□□□ 0.7
SFXN1-201ENST00000321442 PTPRTO14522 1441 aa19.42■□□□□ 0.7
SFXN1-201ENST00000321442 TMEM2Q9UHN6 1383 aa19.42■□□□□ 0.7
SFXN1-201ENST00000321442 STK38Q15208 465 aa19.42■□□□□ 0.7
SFXN1-201ENST00000321442 ATP5J2-PTCD1G3V325 749 aa19.42■□□□□ 0.7
SFXN1-201ENST00000321442 NFXL1Q6ZNB6 911 aa19.42■□□□□ 0.7
SFXN1-201ENST00000321442 OTUD7AQ8TE49 926 aaPredicted RBP19.42■□□□□ 0.7
SFXN1-201ENST00000321442 OFD1O75665 1012 aa19.42■□□□□ 0.7
SFXN1-201ENST00000321442 RBSNQ9H1K0 784 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms