RNA–Protein interactions for RNA: ENSMUST00000111045.8

Bdnf-205, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,973 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-205ENSMUST00000111045 Apaf1O88879 1249 aa14.07□□□□□ -0.16
Bdnf-205ENSMUST00000111045 NefhP19246 1090 aa14.07□□□□□ -0.16
Bdnf-205ENSMUST00000111045 Rufy1Q8BIJ7 712 aa14.07□□□□□ -0.16
Bdnf-205ENSMUST00000111045 Nsfl1cQ9CZ44 370 aaKnown RBP14.07□□□□□ -0.16
Bdnf-205ENSMUST00000111045 Pmfbp1Q9WVQ0 1022 aa14.07□□□□□ -0.16
Bdnf-205ENSMUST00000111045 Prr29B1ARI9 187 aa14.07□□□□□ -0.16
Bdnf-205ENSMUST00000111045 NeblQ0II04 452 aa14.07□□□□□ -0.16
Bdnf-205ENSMUST00000111045 Tpm3-rs7D3Z2H9 248 aa14.07□□□□□ -0.16
Bdnf-205ENSMUST00000111045 Acbd5Q5XG73 508 aa14.07□□□□□ -0.16
Bdnf-205ENSMUST00000111045 Erlin2Q8BFZ9 340 aa14.07□□□□□ -0.16
Bdnf-205ENSMUST00000111045 Kiaa1551Q5DTW7 1521 aa14.06□□□□□ -0.16
Bdnf-205ENSMUST00000111045 Txndc2Q6P902 515 aa14.06□□□□□ -0.16
Bdnf-205ENSMUST00000111045 Rbbp5Q8BX09 538 aaKnown RBP14.06□□□□□ -0.16
Bdnf-205ENSMUST00000111045 Q9D9H8 365 aa14.06□□□□□ -0.16
Bdnf-205ENSMUST00000111045 Zkscan7E9PVW1 718 aa14.06□□□□□ -0.16
Bdnf-205ENSMUST00000111045 Ccar2Q8VDP4 922 aaKnown RBP14.06□□□□□ -0.16
Bdnf-205ENSMUST00000111045 Erbb3Q61526 1339 aa14.06□□□□□ -0.16
Bdnf-205ENSMUST00000111045 Frat1P70339 274 aa14.05□□□□□ -0.16
Bdnf-205ENSMUST00000111045 Adck5Q80V03 582 aa14.05□□□□□ -0.16
Bdnf-205ENSMUST00000111045 Pnma3Q8JZW8 466 aa14.05□□□□□ -0.16
Bdnf-205ENSMUST00000111045 Igf1rQ60751 1373 aa14.05□□□□□ -0.16
Bdnf-205ENSMUST00000111045 Lrriq1Q0P5X1 1673 aa14.05□□□□□ -0.16
Bdnf-205ENSMUST00000111045 Gm3409A0A0G2JE67 319 aa14.05□□□□□ -0.16
Bdnf-205ENSMUST00000111045 Nucb1Q02819 459 aaKnown RBP14.05□□□□□ -0.16
Bdnf-205ENSMUST00000111045 Ccdc178Q8CDV0 866 aa14.05□□□□□ -0.16
Bdnf-205ENSMUST00000111045 ClasrpQ8CFC7 668 aa14.05□□□□□ -0.16
Bdnf-205ENSMUST00000111045 Ccer1Q9CQL2 403 aa14.05□□□□□ -0.16
Bdnf-205ENSMUST00000111045 Tex13c2A0A0G2JGA3 530 aa14.04□□□□□ -0.16
Bdnf-205ENSMUST00000111045 Mtx1P47802 317 aa14.04□□□□□ -0.16
Bdnf-205ENSMUST00000111045 PtprgQ05909 1442 aa14.04□□□□□ -0.16
Bdnf-205ENSMUST00000111045 Cpsf1Q9EPU4 1441 aaKnown RBP14.04□□□□□ -0.16
Bdnf-205ENSMUST00000111045 Kank4Q6P9J5 1016 aa14.04□□□□□ -0.16
Bdnf-205ENSMUST00000111045 HnrnpuQ8VEK3 800 aaKnown RBP14.04□□□□□ -0.16
Bdnf-205ENSMUST00000111045 Ythdc2B2RR83 1445 aaKnown RBP14.04□□□□□ -0.16
Bdnf-205ENSMUST00000111045 HalP35492 657 aa14.04□□□□□ -0.16
Bdnf-205ENSMUST00000111045 Psme1P97371 249 aa14.04□□□□□ -0.16
Bdnf-205ENSMUST00000111045 Cul7Q8VE73 1689 aa14.03□□□□□ -0.16
Bdnf-205ENSMUST00000111045 PrimpolQ6P1E7 537 aa14.03□□□□□ -0.16
Bdnf-205ENSMUST00000111045 Snw1Q9CSN1 536 aaKnown RBP14.03□□□□□ -0.16
Bdnf-205ENSMUST00000111045 Lrrc9Q8CDN9 1456 aa14.03□□□□□ -0.16
Bdnf-205ENSMUST00000111045 Usp48Q3V0C5 1052 aa14.03□□□□□ -0.16
Bdnf-205ENSMUST00000111045 Gigyf2Q6Y7W8 1291 aaKnown RBP14.03□□□□□ -0.16
Bdnf-205ENSMUST00000111045 Vps37dQ810I0 261 aa14.03□□□□□ -0.16
Bdnf-205ENSMUST00000111045 Tmem165P52875 323 aa14.03□□□□□ -0.16
Bdnf-205ENSMUST00000111045 Smarcc1P97496 1104 aa14.03□□□□□ -0.16
Bdnf-205ENSMUST00000111045 Jakmip3Q5DTN8 844 aa14.03□□□□□ -0.16
Bdnf-205ENSMUST00000111045 Iffo2Q8R2V2 512 aa14.03□□□□□ -0.16
Bdnf-205ENSMUST00000111045 Dpf1Q9QX66 387 aa14.03□□□□□ -0.16
Bdnf-205ENSMUST00000111045 Pprc1Q6NZN1 1644 aa14.03□□□□□ -0.16
Bdnf-205ENSMUST00000111045 Rnf20Q5DTM8 973 aa14.02□□□□□ -0.16
Bdnf-205ENSMUST00000111045 SkilQ60665 675 aa14.02□□□□□ -0.16
Bdnf-205ENSMUST00000111045 Ccdc181Q80ZU5 509 aa14.02□□□□□ -0.16
Bdnf-205ENSMUST00000111045 Gdap1l1Q8VE33 370 aa14.02□□□□□ -0.16
Bdnf-205ENSMUST00000111045 Zbtb22Q9Z0G7 638 aa14.02□□□□□ -0.16
Bdnf-205ENSMUST00000111045 Rusc2Q80U22 1514 aa14.02□□□□□ -0.16
Bdnf-205ENSMUST00000111045 Ano6Q6P9J9 911 aa14.02□□□□□ -0.17
Bdnf-205ENSMUST00000111045 Pibf1E9Q6K3 756 aa14.01□□□□□ -0.17
Bdnf-205ENSMUST00000111045 Plagl1Q9JLQ4 704 aa14.01□□□□□ -0.17
Bdnf-205ENSMUST00000111045 Mctp1E9PV86 951 aa14.01□□□□□ -0.17
Bdnf-205ENSMUST00000111045 Rab3il1Q8VDV3 383 aa14.01□□□□□ -0.17
Bdnf-205ENSMUST00000111045 Smc3Q9CW03 1217 aaKnown RBP14.01□□□□□ -0.17
Bdnf-205ENSMUST00000111045 Kdm2bQ6P1G2 1309 aa14.01□□□□□ -0.17
Bdnf-205ENSMUST00000111045 Fhod3Q76LL6 1578 aa14.01□□□□□ -0.17
Bdnf-205ENSMUST00000111045 Adgrl2Q8JZZ7 1487 aa14□□□□□ -0.17
Bdnf-205ENSMUST00000111045 Cfap73J3QPZ5 306 aa14□□□□□ -0.17
Bdnf-205ENSMUST00000111045 Spats2Q8K1N4 545 aaKnown RBP14□□□□□ -0.17
Bdnf-205ENSMUST00000111045 TnmdQ9EP64 317 aa14□□□□□ -0.17
Bdnf-205ENSMUST00000111045 Abcc1O35379 1528 aa14□□□□□ -0.17
Bdnf-205ENSMUST00000111045 Ankrd35E9Q9D8 996 aa14□□□□□ -0.17
Bdnf-205ENSMUST00000111045 Snx13Q6PHS6 957 aa14□□□□□ -0.17
Bdnf-205ENSMUST00000111045 Zranb1Q7M760 708 aa14□□□□□ -0.17
Bdnf-205ENSMUST00000111045 Rassf10Q8BL43 508 aa14□□□□□ -0.17
Bdnf-205ENSMUST00000111045 Q9D2X8 372 aa14□□□□□ -0.17
Bdnf-205ENSMUST00000111045 EcsitQ9QZH6 435 aa14□□□□□ -0.17
Bdnf-205ENSMUST00000111045 Pbrm1Q8BSQ9 1634 aaKnown RBP14□□□□□ -0.17
Bdnf-205ENSMUST00000111045 Lrriq3Q14DL3 633 aa14□□□□□ -0.17
Bdnf-205ENSMUST00000111045 Tbc1d31Q6NXY1 996 aa14□□□□□ -0.17
Bdnf-205ENSMUST00000111045 Themis2Q91YX0 663 aa14□□□□□ -0.17
Bdnf-205ENSMUST00000111045 Smc1aQ9CU62 1233 aaKnown RBP14□□□□□ -0.17
Bdnf-205ENSMUST00000111045 Smarcc2Q6PDG5 1213 aa13.99□□□□□ -0.17
Bdnf-205ENSMUST00000111045 Ccdc60Q8C4J0 545 aa13.99□□□□□ -0.17
Bdnf-205ENSMUST00000111045 Dnaaf4Q8R368 420 aa13.99□□□□□ -0.17
Bdnf-205ENSMUST00000111045 Kif14L0N7N1 1674 aaKnown RBP13.99□□□□□ -0.17
Bdnf-205ENSMUST00000111045 Ccdc57Q6PHN1 1016 aa13.99□□□□□ -0.17
Bdnf-205ENSMUST00000111045 Psmd2Q8VDM4 908 aa13.99□□□□□ -0.17
Bdnf-205ENSMUST00000111045 Med4Q9CQA5 270 aa13.99□□□□□ -0.17
Bdnf-205ENSMUST00000111045 Atxn3Q9CVD2 355 aa13.99□□□□□ -0.17
Bdnf-205ENSMUST00000111045 Sstr3P30935 428 aa13.98□□□□□ -0.17
Bdnf-205ENSMUST00000111045 NexnQ7TPW1 607 aa13.98□□□□□ -0.17
Bdnf-205ENSMUST00000111045 Afap1Q80YS6 731 aa13.98□□□□□ -0.17
Bdnf-205ENSMUST00000111045 Odf2lQ9D478 642 aa13.98□□□□□ -0.17
Bdnf-205ENSMUST00000111045 Swt1Q9DBQ9 907 aa13.98□□□□□ -0.17
Bdnf-205ENSMUST00000111045 Mroh2aD3Z750 1679 aa13.98□□□□□ -0.17
Bdnf-205ENSMUST00000111045 Trak2Q6P9N8 913 aa13.98□□□□□ -0.17
Bdnf-205ENSMUST00000111045 Phf20l1Q8CCJ9 1013 aa13.98□□□□□ -0.17
Bdnf-205ENSMUST00000111045 Sh3gl3Q62421 347 aa13.98□□□□□ -0.17
Bdnf-205ENSMUST00000111045 KinQ8K339 391 aa13.98□□□□□ -0.17
Bdnf-205ENSMUST00000111045 Dmrtc1Q9D9R7 182 aa13.98□□□□□ -0.17
Bdnf-205ENSMUST00000111045 Eif4g2Q62448 906 aaKnown RBP13.98□□□□□ -0.17
Bdnf-205ENSMUST00000111045 VeztQ3ZK22 780 aa13.97□□□□□ -0.17
Retrieved 100 of 22,080 RNA–protein pairs in 17.1 ms