Protein–RNA interactions for Protein: Q8VDV3

Rab3il1, Guanine nucleotide exchange factor for Rab-3A, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab3il1Q8VDV3 Gm25239-201ENSMUST00000174915 86 ntBASIC39.62■■■■□ 3.93
Rab3il1Q8VDV3 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC38■■■■□ 3.67
Rab3il1Q8VDV3 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC36.91■■■■□ 3.5
Rab3il1Q8VDV3 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC36.76■■■■□ 3.48
Rab3il1Q8VDV3 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.24■■■■□ 3.39
Rab3il1Q8VDV3 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.87■■■■□ 3.33
Rab3il1Q8VDV3 Psd-208ENSMUST00000224556 2034 ntBASIC35.42■■■■□ 3.26
Rab3il1Q8VDV3 Gm15042-201ENSMUST00000120212 883 ntBASIC35.39■■■■□ 3.26
Rab3il1Q8VDV3 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
Rab3il1Q8VDV3 Gm15045-201ENSMUST00000117359 883 ntBASIC34.77■■■■□ 3.16
Rab3il1Q8VDV3 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC34.71■■■■□ 3.15
Rab3il1Q8VDV3 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.13
Rab3il1Q8VDV3 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC34.44■■■■□ 3.1
Rab3il1Q8VDV3 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC34.12■■■■□ 3.05
Rab3il1Q8VDV3 Gm24109-201ENSMUST00000175489 103 ntBASIC34.02■■■■□ 3.04
Rab3il1Q8VDV3 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC33.99■■■■□ 3.03
Rab3il1Q8VDV3 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.98■■■■□ 3.03
Rab3il1Q8VDV3 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC33.96■■■■□ 3.03
Rab3il1Q8VDV3 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC33.92■■■■□ 3.02
Rab3il1Q8VDV3 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC33.84■■■■□ 3.01
Rab3il1Q8VDV3 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC33.62■■■□□ 2.97
Rab3il1Q8VDV3 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC33.62■■■□□ 2.97
Rab3il1Q8VDV3 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC33.61■■■□□ 2.97
Rab3il1Q8VDV3 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC33.61■■■□□ 2.97
Rab3il1Q8VDV3 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC33.55■■■□□ 2.96
Rab3il1Q8VDV3 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC33.45■■■□□ 2.95
Rab3il1Q8VDV3 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.41■■■□□ 2.94
Rab3il1Q8VDV3 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.94
Rab3il1Q8VDV3 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC33.33■■■□□ 2.93
Rab3il1Q8VDV3 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
Rab3il1Q8VDV3 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC33.22■■■□□ 2.91
Rab3il1Q8VDV3 Gm23366-201ENSMUST00000175022 89 ntBASIC33.2■■■□□ 2.91
Rab3il1Q8VDV3 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
Rab3il1Q8VDV3 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
Rab3il1Q8VDV3 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
Rab3il1Q8VDV3 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
Rab3il1Q8VDV3 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC32.92■■■□□ 2.86
Rab3il1Q8VDV3 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
Rab3il1Q8VDV3 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32.8■■■□□ 2.84
Rab3il1Q8VDV3 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
Rab3il1Q8VDV3 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC32.66■■■□□ 2.82
Rab3il1Q8VDV3 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC32.56■■■□□ 2.8
Rab3il1Q8VDV3 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32.52■■■□□ 2.8
Rab3il1Q8VDV3 AC153911.1-202ENSMUST00000218534 1034 ntBASIC32.45■■■□□ 2.79
Rab3il1Q8VDV3 Gm10524-201ENSMUST00000181931 1893 ntBASIC32.44■■■□□ 2.78
Rab3il1Q8VDV3 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
Rab3il1Q8VDV3 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
Rab3il1Q8VDV3 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
Rab3il1Q8VDV3 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Rab3il1Q8VDV3 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC32.29■■■□□ 2.76
Rab3il1Q8VDV3 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Rab3il1Q8VDV3 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Rab3il1Q8VDV3 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Rab3il1Q8VDV3 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Rab3il1Q8VDV3 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31.65■■■□□ 2.66
Rab3il1Q8VDV3 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
Rab3il1Q8VDV3 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC31.62■■■□□ 2.65
Rab3il1Q8VDV3 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.51■■■□□ 2.63
Rab3il1Q8VDV3 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC31.49■■■□□ 2.63
Rab3il1Q8VDV3 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC31.48■■■□□ 2.63
Rab3il1Q8VDV3 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31.47■■■□□ 2.63
Rab3il1Q8VDV3 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC31.46■■■□□ 2.63
Rab3il1Q8VDV3 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.34■■■□□ 2.61
Rab3il1Q8VDV3 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Rab3il1Q8VDV3 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Rab3il1Q8VDV3 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Rab3il1Q8VDV3 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC31.25■■■□□ 2.59
Rab3il1Q8VDV3 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC31.21■■■□□ 2.59
Rab3il1Q8VDV3 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Rab3il1Q8VDV3 Gm27325-201ENSMUST00000175467 74 ntBASIC31.19■■■□□ 2.58
Rab3il1Q8VDV3 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
Rab3il1Q8VDV3 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Rab3il1Q8VDV3 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Rab3il1Q8VDV3 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Rab3il1Q8VDV3 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC31.09■■■□□ 2.57
Rab3il1Q8VDV3 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Rab3il1Q8VDV3 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Rab3il1Q8VDV3 Gm25238-201ENSMUST00000174914 89 ntBASIC31.03■■■□□ 2.56
Rab3il1Q8VDV3 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Rab3il1Q8VDV3 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Rab3il1Q8VDV3 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Rab3il1Q8VDV3 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Rab3il1Q8VDV3 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.92■■■□□ 2.54
Rab3il1Q8VDV3 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC30.89■■■□□ 2.54
Rab3il1Q8VDV3 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC30.88■■■□□ 2.53
Rab3il1Q8VDV3 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Rab3il1Q8VDV3 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.81■■■□□ 2.52
Rab3il1Q8VDV3 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Rab3il1Q8VDV3 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Rab3il1Q8VDV3 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Rab3il1Q8VDV3 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Rab3il1Q8VDV3 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
Rab3il1Q8VDV3 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
Rab3il1Q8VDV3 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Rab3il1Q8VDV3 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC30.61■■■□□ 2.49
Rab3il1Q8VDV3 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Rab3il1Q8VDV3 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.58■■■□□ 2.49
Rab3il1Q8VDV3 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Rab3il1Q8VDV3 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.53■■■□□ 2.48
Rab3il1Q8VDV3 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC30.52■■■□□ 2.48
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms