RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Pex14Q9R0A0 376 aa11.17□□□□□ -0.62
Upf3b-201ENSMUST00000076265 1700006A11RikB9EHI3 544 aa11.17□□□□□ -0.62
Upf3b-201ENSMUST00000076265 Ccdc174Q3U155 467 aa11.17□□□□□ -0.62
Upf3b-201ENSMUST00000076265 Add2Q9QYB8 725 aa11.17□□□□□ -0.62
Upf3b-201ENSMUST00000076265 A2mQ6GQT1 1474 aa11.16□□□□□ -0.62
Upf3b-201ENSMUST00000076265 Prex2Q3LAC4 1598 aa11.16□□□□□ -0.62
Upf3b-201ENSMUST00000076265 S100bP50114 92 aa11.16□□□□□ -0.62
Upf3b-201ENSMUST00000076265 Gemin4Q6P6L6 1058 aaKnown RBP11.16□□□□□ -0.62
Upf3b-201ENSMUST00000076265 Stac3Q8BZ71 360 aa11.16□□□□□ -0.62
Upf3b-201ENSMUST00000076265 Q8C6G1 249 aa11.16□□□□□ -0.62
Upf3b-201ENSMUST00000076265 Sugp2Q8CH09 1067 aa11.16□□□□□ -0.62
Upf3b-201ENSMUST00000076265 Onecut3Q8K557 490 aa11.16□□□□□ -0.62
Upf3b-201ENSMUST00000076265 ReckQ9Z0J1 971 aa11.16□□□□□ -0.62
Upf3b-201ENSMUST00000076265 Alpk3Q924C5 1678 aa11.16□□□□□ -0.62
Upf3b-201ENSMUST00000076265 PbsnO08976 174 aa11.15□□□□□ -0.62
Upf3b-201ENSMUST00000076265 Epb41l2O70318 988 aaKnown RBP11.15□□□□□ -0.62
Upf3b-201ENSMUST00000076265 Mdm2P23804 489 aa11.15□□□□□ -0.62
Upf3b-201ENSMUST00000076265 Ppp4r3aQ6P2K6 820 aa11.15□□□□□ -0.62
Upf3b-201ENSMUST00000076265 Bank1Q80VH0 783 aa11.15□□□□□ -0.62
Upf3b-201ENSMUST00000076265 GphnQ8BUV3 769 aaKnown RBP11.15□□□□□ -0.62
Upf3b-201ENSMUST00000076265 Rai14Q9EP71 979 aaKnown RBP11.15□□□□□ -0.62
Upf3b-201ENSMUST00000076265 Pcf11G3X9Z4 1553 aa11.15□□□□□ -0.62
Upf3b-201ENSMUST00000076265 Mug1P28665 1476 aa11.14□□□□□ -0.63
Upf3b-201ENSMUST00000076265 Tpx2A2APB8 745 aaKnown RBP11.14□□□□□ -0.63
Upf3b-201ENSMUST00000076265 Kif1cO35071 1100 aaKnown RBP11.14□□□□□ -0.63
Upf3b-201ENSMUST00000076265 Akap2O54931 893 aa11.14□□□□□ -0.63
Upf3b-201ENSMUST00000076265 Rb1P13405 921 aa11.14□□□□□ -0.63
Upf3b-201ENSMUST00000076265 Mier1Q5UAK0 511 aa11.14□□□□□ -0.63
Upf3b-201ENSMUST00000076265 Npdc1Q64322 332 aa11.14□□□□□ -0.63
Upf3b-201ENSMUST00000076265 Gm2163Q6PCY5 473 aa11.14□□□□□ -0.63
Upf3b-201ENSMUST00000076265 Vps53Q8CCB4 832 aa11.14□□□□□ -0.63
Upf3b-201ENSMUST00000076265 Vmp1Q99KU0 406 aa11.14□□□□□ -0.63
Upf3b-201ENSMUST00000076265 Krt20Q9D312 431 aa11.14□□□□□ -0.63
Upf3b-201ENSMUST00000076265 Gm13941A2AJ38 245 aa11.14□□□□□ -0.63
Upf3b-201ENSMUST00000076265 Gm4871D3Z0W7 314 aa11.14□□□□□ -0.63
Upf3b-201ENSMUST00000076265 LdhaP06151 332 aaKnown RBP11.14□□□□□ -0.63
Upf3b-201ENSMUST00000076265 Gtpbp6Q3U6U5 514 aa11.14□□□□□ -0.63
Upf3b-201ENSMUST00000076265 Zcchc17Q9ESX4 241 aaKnown RBP11.14□□□□□ -0.63
Upf3b-201ENSMUST00000076265 Q8BGN9 141 aa11.13□□□□□ -0.63
Upf3b-201ENSMUST00000076265 Tbx22Q8K402 517 aa11.13□□□□□ -0.63
Upf3b-201ENSMUST00000076265 Mlh3A0A1Y7VMP7 1443 aa11.13□□□□□ -0.63
Upf3b-201ENSMUST00000076265 Klhl42Q8BFQ9 493 aa11.13□□□□□ -0.63
Upf3b-201ENSMUST00000076265 Cdc37l1Q9CZP7 335 aa11.13□□□□□ -0.63
Upf3b-201ENSMUST00000076265 Tbc1d2B1AVH7 922 aa11.12□□□□□ -0.63
Upf3b-201ENSMUST00000076265 Ppp1r9aH3BJD6 1292 aa11.12□□□□□ -0.63
Upf3b-201ENSMUST00000076265 Frs2Q8C180 508 aa11.12□□□□□ -0.63
Upf3b-201ENSMUST00000076265 DmgdhQ9DBT9 869 aa11.12□□□□□ -0.63
Upf3b-201ENSMUST00000076265 PolhQ9JJN0 694 aa11.12□□□□□ -0.63
Upf3b-201ENSMUST00000076265 CntlnA2AM05 1397 aa11.12□□□□□ -0.63
Upf3b-201ENSMUST00000076265 Dhx57Q6P5D3 1388 aaKnown RBP11.12□□□□□ -0.63
Upf3b-201ENSMUST00000076265 XpcP51612 930 aa11.12□□□□□ -0.63
Upf3b-201ENSMUST00000076265 Uri1Q3TLD5 531 aa11.12□□□□□ -0.63
Upf3b-201ENSMUST00000076265 Znf513Q6PD29 541 aa11.12□□□□□ -0.63
Upf3b-201ENSMUST00000076265 Sel1lQ9Z2G6 790 aa11.12□□□□□ -0.63
Upf3b-201ENSMUST00000076265 Morc2bQ8C5W4 1022 aa11.11□□□□□ -0.63
Upf3b-201ENSMUST00000076265 Slc5a4bQ91ZP4 660 aa11.11□□□□□ -0.63
Upf3b-201ENSMUST00000076265 Rnaseh2aQ9CWY8 301 aa11.11□□□□□ -0.63
Upf3b-201ENSMUST00000076265 Sugt1Q9CX34 336 aa11.11□□□□□ -0.63
Upf3b-201ENSMUST00000076265 Sapcd2Q9D818 391 aa11.11□□□□□ -0.63
Upf3b-201ENSMUST00000076265 Kiaa1551Q5DTW7 1521 aa11.11□□□□□ -0.63
Upf3b-201ENSMUST00000076265 Fam208aQ69ZR9 1610 aaKnown RBP11.11□□□□□ -0.63
Upf3b-201ENSMUST00000076265 AW822073A0A0N4SUK1 652 aa11.1□□□□□ -0.63
Upf3b-201ENSMUST00000076265 NpcdF8VQB8 469 aa11.1□□□□□ -0.63
Upf3b-201ENSMUST00000076265 Pde6bP23440 856 aa11.1□□□□□ -0.63
Upf3b-201ENSMUST00000076265 Psmc1P62192 440 aa11.1□□□□□ -0.63
Upf3b-201ENSMUST00000076265 Ptpn14Q62130 1189 aa11.1□□□□□ -0.63
Upf3b-201ENSMUST00000076265 Ephx4Q6IE26 359 aa11.1□□□□□ -0.63
Upf3b-201ENSMUST00000076265 Lmod1Q8BVA4 595 aa11.1□□□□□ -0.63
Upf3b-201ENSMUST00000076265 Gtse1Q8R080 741 aa11.1□□□□□ -0.63
Upf3b-201ENSMUST00000076265 Mta2Q9R190 668 aa11.1□□□□□ -0.63
Upf3b-201ENSMUST00000076265 Sdccag3A2AIW0 432 aa11.1□□□□□ -0.63
Upf3b-201ENSMUST00000076265 Fez2Q6TYB5 348 aa11.1□□□□□ -0.63
Upf3b-201ENSMUST00000076265 Rnf17Q99MV7 1640 aa11.1□□□□□ -0.63
Upf3b-201ENSMUST00000076265 Ldlrad1D3YYZ1 218 aa11.09□□□□□ -0.63
Upf3b-201ENSMUST00000076265 FosP01101 380 aa11.09□□□□□ -0.63
Upf3b-201ENSMUST00000076265 Ptk2P34152 1090 aa11.09□□□□□ -0.63
Upf3b-201ENSMUST00000076265 Rgl3Q3UYI5 709 aa11.09□□□□□ -0.63
Upf3b-201ENSMUST00000076265 Klra5Q60652 266 aa11.09□□□□□ -0.63
Upf3b-201ENSMUST00000076265 Krt72Q6IME9 520 aa11.09□□□□□ -0.63
Upf3b-201ENSMUST00000076265 A0A0U1RNP2 1173 aa11.09□□□□□ -0.63
Upf3b-201ENSMUST00000076265 Tmx1Q8VBT0 278 aa11.09□□□□□ -0.63
Upf3b-201ENSMUST00000076265 Ccdc47Q9D024 483 aaKnown RBP11.09□□□□□ -0.63
Upf3b-201ENSMUST00000076265 Osbpl5Q9ER64 874 aa11.09□□□□□ -0.63
Upf3b-201ENSMUST00000076265 Abca9Q8K449 1623 aa11.09□□□□□ -0.63
Upf3b-201ENSMUST00000076265 Atp9bP98195 1146 aa11.08□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Hif1aQ61221 836 aaKnown RBP11.08□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Polr3gQ6NXY9 223 aa11.08□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Rnf187Q8BFX1 236 aa11.08□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Gm1043A0A140LJC2 1431 aa11.08□□□□□ -0.64
Upf3b-201ENSMUST00000076265 NxnP97346 435 aa11.08□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Dcdc2Q5DU00 475 aa11.08□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Serpina3gQ5I2A0 440 aa11.08□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Pnpla2Q8BJ56 486 aa11.08□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Tbc1d8Q9Z1A9 1134 aa11.08□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Zkscan5Q9Z1D8 819 aa11.08□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Cdc42bpaQ3UU96 1719 aa11.07□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Kcnb2A6H8H5 907 aa11.07□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Best1O88870 551 aa11.07□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Parp1P11103 1013 aaKnown RBP11.07□□□□□ -0.64
Upf3b-201ENSMUST00000076265 Cct2P80314 535 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 28.1 ms