RNA–Protein interactions for RNA: ENSMUST00000065785.3

Trim50-201, Transcript of E3 ubiquitin-protein ligase TRIM50, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Trim50, Length 1,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50-201ENSMUST00000065785 Chpf2Q3UU43 768 aa19.81■□□□□ 0.76
Trim50-201ENSMUST00000065785 Fam83gQ5SWY7 812 aa19.81■□□□□ 0.76
Trim50-201ENSMUST00000065785 Cyp2d12Q8BVD2 504 aa19.81■□□□□ 0.76
Trim50-201ENSMUST00000065785 TkfcQ8VC30 578 aa19.8■□□□□ 0.76
Trim50-201ENSMUST00000065785 Eif4a1P60843 406 aaKnown RBP19.79■□□□□ 0.76
Trim50-201ENSMUST00000065785 Aplp1Q03157 653 aa19.79■□□□□ 0.76
Trim50-201ENSMUST00000065785 Col15a1O35206 1367 aa19.79■□□□□ 0.76
Trim50-201ENSMUST00000065785 Bcl2l12Q9D3J3 255 aa19.79■□□□□ 0.76
Trim50-201ENSMUST00000065785 Dlg5E9Q9R9 1921 aa19.78■□□□□ 0.76
Trim50-201ENSMUST00000065785 Disp3A3KFU9 1347 aa19.77■□□□□ 0.76
Trim50-201ENSMUST00000065785 Mfap1aC0HKD8 439 aaKnown RBP19.77■□□□□ 0.76
Trim50-201ENSMUST00000065785 Mfap1bC0HKD9 439 aaKnown RBP19.77■□□□□ 0.76
Trim50-201ENSMUST00000065785 Stk36Q69ZM6 1316 aa19.76■□□□□ 0.75
Trim50-201ENSMUST00000065785 Gnai2P08752 355 aaKnown RBP19.76■□□□□ 0.75
Trim50-201ENSMUST00000065785 CoilQ5SU73 570 aa19.76■□□□□ 0.75
Trim50-201ENSMUST00000065785 Slc5a4bQ91ZP4 660 aa19.76■□□□□ 0.75
Trim50-201ENSMUST00000065785 Card10P58660 1021 aa19.76■□□□□ 0.75
Trim50-201ENSMUST00000065785 BcorQ8CGN4 1759 aa19.76■□□□□ 0.75
Trim50-201ENSMUST00000065785 Col1a2Q01149 1372 aa19.75■□□□□ 0.75
Trim50-201ENSMUST00000065785 Hoxa7P02830 229 aa19.75■□□□□ 0.75
Trim50-201ENSMUST00000065785 FanclQ9CR14 375 aa19.74■□□□□ 0.75
Trim50-201ENSMUST00000065785 Smim5Q8BT42 78 aa19.74■□□□□ 0.75
Trim50-201ENSMUST00000065785 Btbd11Q6GQW0 1109 aa19.73■□□□□ 0.75
Trim50-201ENSMUST00000065785 Tnpo1Q8BFY9 898 aaKnown RBP19.73■□□□□ 0.75
Trim50-201ENSMUST00000065785 OptnQ8K3K8 584 aa19.73■□□□□ 0.75
Trim50-201ENSMUST00000065785 Atg3Q9CPX6 314 aa19.73■□□□□ 0.75
Trim50-201ENSMUST00000065785 CenppQ9CZ92 286 aa19.73■□□□□ 0.75
Trim50-201ENSMUST00000065785 Anapc15-psA0A140T8L6 141 aa19.72■□□□□ 0.75
Trim50-201ENSMUST00000065785 Kif2cQ922S8 721 aa19.72■□□□□ 0.75
Trim50-201ENSMUST00000065785 Gm21698A0A087WQP8 267 aa19.71■□□□□ 0.75
Trim50-201ENSMUST00000065785 Gm21671G3UY31 267 aa19.71■□□□□ 0.75
Trim50-201ENSMUST00000065785 CrklP47941 303 aa19.71■□□□□ 0.75
Trim50-201ENSMUST00000065785 Tbc1d9Q3UYK3 1264 aa19.71■□□□□ 0.75
Trim50-201ENSMUST00000065785 Tmem119Q8R138 280 aa19.71■□□□□ 0.75
Trim50-201ENSMUST00000065785 Echdc1Q9D9V3 322 aa19.71■□□□□ 0.75
Trim50-201ENSMUST00000065785 Gm10471E9Q1C7 252 aa19.7■□□□□ 0.74
Trim50-201ENSMUST00000065785 Atp8b2P98199 1209 aa19.7■□□□□ 0.74
Trim50-201ENSMUST00000065785 PsapQ61207 557 aaKnown RBP19.7■□□□□ 0.74
Trim50-201ENSMUST00000065785 Acsbg1Q99PU5 721 aa19.7■□□□□ 0.74
Trim50-201ENSMUST00000065785 Gm10093D3YYI8 482 aa19.69■□□□□ 0.74
Trim50-201ENSMUST00000065785 Hdac1O09106 482 aaKnown RBP19.69■□□□□ 0.74
Trim50-201ENSMUST00000065785 Cyp2d11P24457 504 aa19.69■□□□□ 0.74
Trim50-201ENSMUST00000065785 ThemisQ8BGW0 636 aa19.69■□□□□ 0.74
Trim50-201ENSMUST00000065785 Cdhr2E9Q7P9 1308 aa19.69■□□□□ 0.74
Trim50-201ENSMUST00000065785 Atg4a-psA0A0G2JFS9 396 aa19.69■□□□□ 0.74
Trim50-201ENSMUST00000065785 Ccdc146E9Q9F7 977 aa19.69■□□□□ 0.74
Trim50-201ENSMUST00000065785 Atg4aQ8C9S8 396 aa19.69■□□□□ 0.74
Trim50-201ENSMUST00000065785 Nkx2-3P97334 362 aa19.68■□□□□ 0.74
Trim50-201ENSMUST00000065785 ZgpatQ8VDM1 511 aa19.68■□□□□ 0.74
Trim50-201ENSMUST00000065785 Nek4Q9Z1J2 792 aa19.68■□□□□ 0.74
Trim50-201ENSMUST00000065785 Slit1Q80TR4 1531 aa19.68■□□□□ 0.74
Trim50-201ENSMUST00000065785 Tns2Q8CGB6 1400 aa19.68■□□□□ 0.74
Trim50-201ENSMUST00000065785 Nhsl1Q8CAF4 1587 aa19.68■□□□□ 0.74
Trim50-201ENSMUST00000065785 Arhgef1Q61210 920 aaKnown RBP19.67■□□□□ 0.74
Trim50-201ENSMUST00000065785 Nphp1Q9QY53 687 aa19.67■□□□□ 0.74
Trim50-201ENSMUST00000065785 FocadA2AKG8 1798 aa19.67■□□□□ 0.74
Trim50-201ENSMUST00000065785 Tnnt1O88346 262 aa19.67■□□□□ 0.74
Trim50-201ENSMUST00000065785 Pdzd9Q9D9M4 266 aa19.67■□□□□ 0.74
Trim50-201ENSMUST00000065785 Tnks1bp1P58871 1720 aa19.66■□□□□ 0.74
Trim50-201ENSMUST00000065785 Mmp8O70138 465 aa19.66■□□□□ 0.74
Trim50-201ENSMUST00000065785 Ppp1r42Q8R1Z4 357 aa19.66■□□□□ 0.74
Trim50-201ENSMUST00000065785 Lrrc59Q922Q8 307 aaKnown RBP19.66■□□□□ 0.74
Trim50-201ENSMUST00000065785 Cyp46a1Q9WVK8 500 aa19.66■□□□□ 0.74
Trim50-201ENSMUST00000065785 Nyap1Q6PFX7 833 aa19.65■□□□□ 0.74
Trim50-201ENSMUST00000065785 Srgap3Q812A2 1099 aa19.65■□□□□ 0.74
Trim50-201ENSMUST00000065785 Txnrd1Q9JMH6 613 aa19.65■□□□□ 0.74
Trim50-201ENSMUST00000065785 Phkg2Q9DB30 406 aa19.65■□□□□ 0.74
Trim50-201ENSMUST00000065785 Morc2aQ69ZX6 1030 aa19.64■□□□□ 0.73
Trim50-201ENSMUST00000065785 GckrQ91X44 587 aa19.64■□□□□ 0.73
Trim50-201ENSMUST00000065785 Smarca5Q91ZW3 1051 aaKnown RBP19.64■□□□□ 0.73
Trim50-201ENSMUST00000065785 Taf7Q9R1C0 341 aa19.64■□□□□ 0.73
Trim50-201ENSMUST00000065785 Hsp90aa1P07901 733 aaKnown RBP19.63■□□□□ 0.73
Trim50-201ENSMUST00000065785 HdgfP51859 237 aaKnown RBP19.63■□□□□ 0.73
Trim50-201ENSMUST00000065785 Bend3Q6PAL0 825 aa19.63■□□□□ 0.73
Trim50-201ENSMUST00000065785 Htatsf1Q8BGC0 757 aa19.62■□□□□ 0.73
Trim50-201ENSMUST00000065785 Chmp7Q8R1T1 451 aa19.62■□□□□ 0.73
Trim50-201ENSMUST00000065785 Cntnap1O54991 1385 aa19.62■□□□□ 0.73
Trim50-201ENSMUST00000065785 Mcmdc2E9Q956 681 aa19.61■□□□□ 0.73
Trim50-201ENSMUST00000065785 Sema6bO54951 886 aa19.61■□□□□ 0.73
Trim50-201ENSMUST00000065785 Fkbp4P30416 458 aa19.61■□□□□ 0.73
Trim50-201ENSMUST00000065785 Ddx54Q8K4L0 874 aaKnown RBP19.61■□□□□ 0.73
Trim50-201ENSMUST00000065785 Flt4P35917 1363 aa19.61■□□□□ 0.73
Trim50-201ENSMUST00000065785 Nucb1Q02819 459 aaKnown RBP19.6■□□□□ 0.73
Trim50-201ENSMUST00000065785 Zranb3Q6NZP1 1069 aa19.6■□□□□ 0.73
Trim50-201ENSMUST00000065785 4930572O03RikQ8C5Y0 211 aa19.6■□□□□ 0.73
Trim50-201ENSMUST00000065785 Ssfa2Q922B9 1252 aa19.6■□□□□ 0.73
Trim50-201ENSMUST00000065785 Ppp6r3Q922D4 844 aa19.6■□□□□ 0.73
Trim50-201ENSMUST00000065785 Adcy9P51830 1353 aa19.6■□□□□ 0.73
Trim50-201ENSMUST00000065785 Plekhd1B2RPU2 505 aa19.6■□□□□ 0.73
Trim50-201ENSMUST00000065785 Pdia3P27773 505 aaKnown RBP19.6■□□□□ 0.73
Trim50-201ENSMUST00000065785 Cwc27Q3TKY6 469 aa19.6■□□□□ 0.73
Trim50-201ENSMUST00000065785 Zkscan2G3X952 960 aa19.59■□□□□ 0.73
Trim50-201ENSMUST00000065785 Cc2d1aQ8K1A6 943 aa19.59■□□□□ 0.73
Trim50-201ENSMUST00000065785 Ubr2Q6WKZ8 1755 aa19.59■□□□□ 0.73
Trim50-201ENSMUST00000065785 Terf2O35144 541 aa19.58■□□□□ 0.73
Trim50-201ENSMUST00000065785 Slx1bQ8BX32 270 aa19.58■□□□□ 0.73
Trim50-201ENSMUST00000065785 Lrp6O88572 1613 aa19.58■□□□□ 0.73
Trim50-201ENSMUST00000065785 Rnf123Q5XPI3 1314 aa19.58■□□□□ 0.72
Trim50-201ENSMUST00000065785 Iqsec3Q3TES0 1195 aa19.58■□□□□ 0.72
Trim50-201ENSMUST00000065785 HellsQ60848 821 aa19.58■□□□□ 0.72
Retrieved 100 of 22,080 RNA–protein pairs in 46.3 ms