RNA–Protein interactions for RNA: ENST00000548163.1

FAM109A-204, Transcript of Sesquipedalian-1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene FAM109A, Length 2,317 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM109A-204ENST00000548163 NISCHQ9Y2I1 1504 aa37.04■■■■□ 3.52
FAM109A-204ENST00000548163 CCDC180Q9P1Z9 1646 aa32.04■■■□□ 2.72
FAM109A-204ENST00000548163 ZCCHC6Q5VYS8 1495 aaKnown RBP31.22■■■□□ 2.59
FAM109A-204ENST00000548163 SHROOM4Q9ULL8 1493 aa31.07■■■□□ 2.56
FAM109A-204ENST00000548163 DCAF8L2P0C7V8 631 aa30.79■■■□□ 2.52
FAM109A-204ENST00000548163 ABCC9O60706 1549 aa30.75■■■□□ 2.51
FAM109A-204ENST00000548163 DCAF1Q9Y4B6 1507 aa30.41■■■□□ 2.46
FAM109A-204ENST00000548163 SUPT5HO00267 1087 aaKnown RBP30.14■■■□□ 2.42
FAM109A-204ENST00000548163 MYO15BQ96JP2 1530 aa29.94■■■□□ 2.38
FAM109A-204ENST00000548163 NACADO15069 1562 aa29.93■■■□□ 2.38
FAM109A-204ENST00000548163 RB1CC1Q8TDY2 1594 aa29.77■■■□□ 2.36
FAM109A-204ENST00000548163 SCRIBQ14160 1630 aa29.7■■■□□ 2.35
FAM109A-204ENST00000548163 UNC13AQ9UPW8 1703 aa29.23■■■□□ 2.27
FAM109A-204ENST00000548163 RSF1Q96T23 1441 aaPredicted RBP29.05■■■□□ 2.24
FAM109A-204ENST00000548163 CHIC1Q5VXU3 224 aa29.02■■■□□ 2.24
FAM109A-204ENST00000548163 PABPN1Q86U42 306 aaKnown RBP eCLIP28.97■■■□□ 2.23
FAM109A-204ENST00000548163 CECR2Q9BXF3 1484 aa28.93■■■□□ 2.22
FAM109A-204ENST00000548163 BICRAQ9NZM4 1560 aa28.92■■■□□ 2.22
FAM109A-204ENST00000548163 MROH2BQ7Z745 1585 aa28.77■■■□□ 2.2
FAM109A-204ENST00000548163 WIZO95785 1651 aa28.59■■■□□ 2.17
FAM109A-204ENST00000548163 BAZ1AQ9NRL2 1556 aaPredicted RBP28.5■■■□□ 2.15
FAM109A-204ENST00000548163 SMARCA4P51532 1647 aa28.36■■■□□ 2.13
FAM109A-204ENST00000548163 HRCP23327 699 aa28.29■■■□□ 2.12
FAM109A-204ENST00000548163 TOP2AP11388 1531 aaKnown RBP28.13■■■□□ 2.09
FAM109A-204ENST00000548163 LOC105371045A0A1W2PR82 267 aa28.12■■■□□ 2.09
FAM109A-204ENST00000548163 TRIM41Q8WV44 630 aa28.12■■■□□ 2.09
FAM109A-204ENST00000548163 EIF4G1Q04637 1599 aaKnown RBP28.08■■■□□ 2.09
FAM109A-204ENST00000548163 CCDC88BA6NC98 1476 aa27.98■■■□□ 2.07
FAM109A-204ENST00000548163 SMARCA2P51531 1590 aa27.96■■■□□ 2.07
FAM109A-204ENST00000548163 FAM9AQ8IZU1 332 aaPredicted RBP27.86■■■□□ 2.05
FAM109A-204ENST00000548163 ATAD2BQ9ULI0 1458 aa27.86■■■□□ 2.05
FAM109A-204ENST00000548163 PEG3Q9GZU2 1588 aa27.85■■■□□ 2.05
FAM109A-204ENST00000548163 PCGF6Q9BYE7 350 aa27.84■■■□□ 2.05
FAM109A-204ENST00000548163 PPARGC1BQ86YN6 1023 aaKnown RBP27.78■■■□□ 2.04
FAM109A-204ENST00000548163 CC2D2AQ9P2K1 1620 aa27.77■■■□□ 2.04
FAM109A-204ENST00000548163 ABCC8Q09428 1581 aa27.72■■■□□ 2.03
FAM109A-204ENST00000548163 BAZ1BQ9UIG0 1483 aaKnown RBP27.71■■■□□ 2.03
FAM109A-204ENST00000548163 EHMT2Q96KQ7 1210 aa27.64■■■□□ 2.02
FAM109A-204ENST00000548163 NCAPD3P42695 1498 aa27.63■■■□□ 2.01
FAM109A-204ENST00000548163 HMGXB3Q12766 1538 aa27.56■■■□□ 2
FAM109A-204ENST00000548163 TRIM26Q12899 539 aaPredicted RBP27.44■■□□□ 1.98
FAM109A-204ENST00000548163 DNAJC5BQ9UF47 199 aa27.43■■□□□ 1.98
FAM109A-204ENST00000548163 SOGA1O94964 1423 aa27.31■■□□□ 1.96
FAM109A-204ENST00000548163 WRNQ14191 1432 aaPredicted RBP eCLIP27.31■■□□□ 1.96
FAM109A-204ENST00000548163 SYNJ1O43426 1573 aa27.24■■□□□ 1.95
FAM109A-204ENST00000548163 RUSC2Q8N2Y8 1516 aa27.22■■□□□ 1.95
FAM109A-204ENST00000548163 CSRNP3Q8WYN3 585 aa27.05■■□□□ 1.92
FAM109A-204ENST00000548163 EEA1Q15075 1411 aa27.04■■□□□ 1.92
FAM109A-204ENST00000548163 ZEB1P37275 1124 aaPredicted RBP27■■□□□ 1.91
FAM109A-204ENST00000548163 CFTRP13569 1480 aa26.95■■□□□ 1.91
FAM109A-204ENST00000548163 TOP2BQ02880 1626 aa26.95■■□□□ 1.9
FAM109A-204ENST00000548163 CADPSQ9ULU8 1353 aa26.94■■□□□ 1.9
FAM109A-204ENST00000548163 NESP48681 1621 aa26.9■■□□□ 1.9
FAM109A-204ENST00000548163 CEP162Q5TB80 1403 aa26.88■■□□□ 1.89
FAM109A-204ENST00000548163 UBTFP17480 764 aaKnown RBP26.88■■□□□ 1.89
FAM109A-204ENST00000548163 BIVM-ERCC5R4GMW8 1640 aa26.87■■□□□ 1.89
FAM109A-204ENST00000548163 TNIKQ9UKE5 1360 aa26.86■■□□□ 1.89
FAM109A-204ENST00000548163 GOLGA3Q08378 1498 aa26.84■■□□□ 1.89
FAM109A-204ENST00000548163 CUX1P39880 1505 aa26.83■■□□□ 1.89
FAM109A-204ENST00000548163 PRDM2Q13029 1718 aa26.78■■□□□ 1.88
FAM109A-204ENST00000548163 LAMC3Q9Y6N6 1575 aa26.76■■□□□ 1.87
FAM109A-204ENST00000548163 CEP164Q9UPV0 1460 aa26.75■■□□□ 1.87
FAM109A-204ENST00000548163 KIF21BO75037 1637 aa26.75■■□□□ 1.87
FAM109A-204ENST00000548163 PELP1Q8IZL8 1130 aaKnown RBP26.73■■□□□ 1.87
FAM109A-204ENST00000548163 RAPGEF2Q9Y4G8 1499 aa26.68■■□□□ 1.86
FAM109A-204ENST00000548163 FANCD2Q9BXW9 1451 aa26.67■■□□□ 1.86
FAM109A-204ENST00000548163 SCAF1Q9H7N4 1312 aaKnown RBP26.64■■□□□ 1.86
FAM109A-204ENST00000548163 TTBK1Q5TCY1 1321 aaPredicted RBP26.59■■□□□ 1.85
FAM109A-204ENST00000548163 PDS5BQ9NTI5 1447 aa26.57■■□□□ 1.84
FAM109A-204ENST00000548163 KIF21AQ7Z4S6 1674 aa26.54■■□□□ 1.84
FAM109A-204ENST00000548163 RANGAP1P46060 587 aaPredicted RBP26.51■■□□□ 1.84
FAM109A-204ENST00000548163 KIF27Q86VH2 1401 aa26.51■■□□□ 1.83
FAM109A-204ENST00000548163 CLIP1P30622 1438 aa26.5■■□□□ 1.83
FAM109A-204ENST00000548163 PRXQ9BXM0 1461 aa26.49■■□□□ 1.83
FAM109A-204ENST00000548163 FGD5Q6ZNL6 1462 aa26.44■■□□□ 1.82
FAM109A-204ENST00000548163 ERICH3Q5RHP9 1530 aa26.43■■□□□ 1.82
FAM109A-204ENST00000548163 CUX2O14529 1486 aa26.4■■□□□ 1.82
FAM109A-204ENST00000548163 ERCC6Q03468 1493 aa26.38■■□□□ 1.81
FAM109A-204ENST00000548163 URB2Q14146 1524 aaKnown RBP26.36■■□□□ 1.81
FAM109A-204ENST00000548163 TOPBP1Q92547 1522 aa26.34■■□□□ 1.81
FAM109A-204ENST00000548163 DNMBPQ6XZF7 1577 aa26.33■■□□□ 1.81
FAM109A-204ENST00000548163 VPS8Q8N3P4 1428 aa26.31■■□□□ 1.8
FAM109A-204ENST00000548163 IGF1RP08069 1367 aa26.27■■□□□ 1.8
FAM109A-204ENST00000548163 MRC2Q9UBG0 1479 aa26.26■■□□□ 1.79
FAM109A-204ENST00000548163 RAD54L2Q9Y4B4 1467 aa26.24■■□□□ 1.79
FAM109A-204ENST00000548163 POLA1P09884 1462 aaPredicted RBP26.22■■□□□ 1.79
FAM109A-204ENST00000548163 ARAP1Q96P48 1450 aa26.18■■□□□ 1.78
FAM109A-204ENST00000548163 CCER1Q8TC90 406 aaPredicted RBP26.17■■□□□ 1.78
FAM109A-204ENST00000548163 CARMIL1Q5VZK9 1371 aa26.15■■□□□ 1.78
FAM109A-204ENST00000548163 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.15■■□□□ 1.78
FAM109A-204ENST00000548163 THOC2Q8NI27 1593 aaKnown RBP26.14■■□□□ 1.78
FAM109A-204ENST00000548163 WDR62O43379 1518 aa26.12■■□□□ 1.77
FAM109A-204ENST00000548163 ABCA10Q8WWZ4 1543 aa26.12■■□□□ 1.77
FAM109A-204ENST00000548163 APLP2Q06481 763 aa26.1■■□□□ 1.77
FAM109A-204ENST00000548163 ARHGAP35Q9NRY4 1499 aa26.07■■□□□ 1.76
FAM109A-204ENST00000548163 ACIN1Q9UKV3 1341 aaKnown RBP26.03■■□□□ 1.76
FAM109A-204ENST00000548163 NEUROD1Q13562 356 aa26.01■■□□□ 1.75
FAM109A-204ENST00000548163 WDR97A6NE52 1622 aa25.98■■□□□ 1.75
FAM109A-204ENST00000548163 TARBP1Q13395 1621 aaKnown RBP25.95■■□□□ 1.75
FAM109A-204ENST00000548163 TDRD9Q8NDG6 1382 aaKnown RBP25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms