RNA–Protein interactions for RNA: ENST00000370396.6

MTM1-203, Transcript of myotubularin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTM1, Length 3,593 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTM1-203ENST00000370396 NISCHQ9Y2I1 1504 aa12.91□□□□□ -0.34
MTM1-203ENST00000370396 CHIC1Q5VXU3 224 aa12.85□□□□□ -0.35
MTM1-203ENST00000370396 AEBP2Q6ZN18 517 aaPredicted RBP12.74□□□□□ -0.37
MTM1-203ENST00000370396 ABCC9O60706 1549 aa12.62□□□□□ -0.39
MTM1-203ENST00000370396 DNAJC5BQ9UF47 199 aa12.52□□□□□ -0.41
MTM1-203ENST00000370396 DNAJC5Q9H3Z4 198 aa12.31□□□□□ -0.44
MTM1-203ENST00000370396 CCDC180Q9P1Z9 1646 aa12.09□□□□□ -0.47
MTM1-203ENST00000370396 RB1CC1Q8TDY2 1594 aa11.86□□□□□ -0.51
MTM1-203ENST00000370396 NACADO15069 1562 aa11.61□□□□□ -0.55
MTM1-203ENST00000370396 PHF23Q9BUL5 403 aaPredicted RBP11.59□□□□□ -0.55
MTM1-203ENST00000370396 CECR2Q9BXF3 1484 aa11.55□□□□□ -0.56
MTM1-203ENST00000370396 PABPN1Q86U42 306 aaKnown RBP eCLIP11.52□□□□□ -0.56
MTM1-203ENST00000370396 SHROOM4Q9ULL8 1493 aa11.51□□□□□ -0.57
MTM1-203ENST00000370396 CUX2O14529 1486 aa11.48□□□□□ -0.57
MTM1-203ENST00000370396 UNC13AQ9UPW8 1703 aa11.44□□□□□ -0.58
MTM1-203ENST00000370396 CC2D2AQ9P2K1 1620 aa11.44□□□□□ -0.58
MTM1-203ENST00000370396 BICRAQ9NZM4 1560 aa11.44□□□□□ -0.58
MTM1-203ENST00000370396 MYO15BQ96JP2 1530 aa11.29□□□□□ -0.6
MTM1-203ENST00000370396 EIF4G1Q04637 1599 aaKnown RBP11.24□□□□□ -0.61
MTM1-203ENST00000370396 TRIM41Q8WV44 630 aa11.21□□□□□ -0.62
MTM1-203ENST00000370396 ERCC6Q03468 1493 aa11.03□□□□□ -0.64
MTM1-203ENST00000370396 DCAF8L2P0C7V8 631 aa10.95□□□□□ -0.66
MTM1-203ENST00000370396 THOC2Q8NI27 1593 aaKnown RBP10.79□□□□□ -0.68
MTM1-203ENST00000370396 DCAF1Q9Y4B6 1507 aa10.79□□□□□ -0.68
MTM1-203ENST00000370396 SCRIBQ14160 1630 aa10.77□□□□□ -0.69
MTM1-203ENST00000370396 NCAPD3P42695 1498 aa10.7□□□□□ -0.7
MTM1-203ENST00000370396 OSCARQ8IYS5 282 aa10.68□□□□□ -0.7
MTM1-203ENST00000370396 BAZ1AQ9NRL2 1556 aaPredicted RBP10.66□□□□□ -0.7
MTM1-203ENST00000370396 PLPPR3Q6T4P5 718 aa10.66□□□□□ -0.7
MTM1-203ENST00000370396 RIMBP3CA6NJZ7 1639 aa10.61□□□□□ -0.71
MTM1-203ENST00000370396 RIMBP3BA6NNM3 1639 aa10.61□□□□□ -0.71
MTM1-203ENST00000370396 RIMBP3Q9UFD9 1639 aa10.61□□□□□ -0.71
MTM1-203ENST00000370396 LAMC3Q9Y6N6 1575 aa10.6□□□□□ -0.71
MTM1-203ENST00000370396 NESP48681 1621 aa10.56□□□□□ -0.72
MTM1-203ENST00000370396 HMGXB3Q12766 1538 aa10.56□□□□□ -0.72
MTM1-203ENST00000370396 ILDR1Q86SU0 546 aaPredicted RBP10.56□□□□□ -0.72
MTM1-203ENST00000370396 PDS5BQ9NTI5 1447 aa10.55□□□□□ -0.72
MTM1-203ENST00000370396 EHMT2Q96KQ7 1210 aa10.52□□□□□ -0.72
MTM1-203ENST00000370396 ZCCHC6Q5VYS8 1495 aaKnown RBP10.52□□□□□ -0.73
MTM1-203ENST00000370396 SMARCA2P51531 1590 aa10.51□□□□□ -0.73
MTM1-203ENST00000370396 TRHP20396 242 aaPredicted RBP10.5□□□□□ -0.73
MTM1-203ENST00000370396 WDR62O43379 1518 aa10.49□□□□□ -0.73
MTM1-203ENST00000370396 ARHGEF11O15085 1522 aa10.49□□□□□ -0.73
MTM1-203ENST00000370396 MRC2Q9UBG0 1479 aa10.48□□□□□ -0.73
MTM1-203ENST00000370396 KIF21AQ7Z4S6 1674 aa10.47□□□□□ -0.73
MTM1-203ENST00000370396 ATAD2BQ9ULI0 1458 aa10.46□□□□□ -0.73
MTM1-203ENST00000370396 SENP3Q9H4L4 574 aaPredicted RBP10.36□□□□□ -0.75
MTM1-203ENST00000370396 CYB5RLQ6IPT4 315 aa10.35□□□□□ -0.75
MTM1-203ENST00000370396 ADRA2BP18089 450 aa10.34□□□□□ -0.75
MTM1-203ENST00000370396 ARAP1Q96P48 1450 aa10.32□□□□□ -0.76
MTM1-203ENST00000370396 KCNA4P22459 653 aa10.31□□□□□ -0.76
MTM1-203ENST00000370396 BAZ1BQ9UIG0 1483 aaKnown RBP10.3□□□□□ -0.76
MTM1-203ENST00000370396 RSF1Q96T23 1441 aaPredicted RBP10.3□□□□□ -0.76
MTM1-203ENST00000370396 CADPSQ9ULU8 1353 aa10.27□□□□□ -0.77
MTM1-203ENST00000370396 PEG3Q9GZU2 1588 aa10.26□□□□□ -0.77
MTM1-203ENST00000370396 CEP164Q9UPV0 1460 aa10.24□□□□□ -0.77
MTM1-203ENST00000370396 SMARCA4P51532 1647 aa10.24□□□□□ -0.77
MTM1-203ENST00000370396 ERCC6L2Q5T890 1561 aa10.17□□□□□ -0.78
MTM1-203ENST00000370396 IFT140Q96RY7 1462 aa10.12□□□□□ -0.79
MTM1-203ENST00000370396 FBXO41Q8TF61 875 aa10.12□□□□□ -0.79
MTM1-203ENST00000370396 FANCD2Q9BXW9 1451 aa10.12□□□□□ -0.79
MTM1-203ENST00000370396 PPP6R1Q9UPN7 881 aa10.09□□□□□ -0.79
MTM1-203ENST00000370396 URB2Q14146 1524 aaKnown RBP10.06□□□□□ -0.8
MTM1-203ENST00000370396 SOCS7O14512 581 aa10.05□□□□□ -0.8
MTM1-203ENST00000370396 CHD1O14646 1710 aa10.05□□□□□ -0.8
MTM1-203ENST00000370396 LMTK3Q96Q04 1460 aa10.04□□□□□ -0.8
MTM1-203ENST00000370396 KDM4FA0A1W2PPD8 638 aa10.03□□□□□ -0.8
MTM1-203ENST00000370396 CLASP1Q7Z460 1538 aa10.01□□□□□ -0.81
MTM1-203ENST00000370396 ZNF608Q9ULD9 1512 aaPredicted RBP10□□□□□ -0.81
MTM1-203ENST00000370396 CSRNP3Q8WYN3 585 aa10□□□□□ -0.81
MTM1-203ENST00000370396 CFTRP13569 1480 aa9.99□□□□□ -0.81
MTM1-203ENST00000370396 EIF4G3O43432 1585 aaKnown RBP9.98□□□□□ -0.81
MTM1-203ENST00000370396 SYNJ1O43426 1573 aa9.95□□□□□ -0.82
MTM1-203ENST00000370396 ABCC8Q09428 1581 aa9.93□□□□□ -0.82
MTM1-203ENST00000370396 HECW2Q9P2P5 1572 aa9.93□□□□□ -0.82
MTM1-203ENST00000370396 GAPVD1Q14C86 1478 aa9.92□□□□□ -0.82
MTM1-203ENST00000370396 KIF13AQ9H1H9 1805 aa9.9□□□□□ -0.82
MTM1-203ENST00000370396 WDR97A6NE52 1622 aa9.89□□□□□ -0.83
MTM1-203ENST00000370396 PRDM2Q13029 1718 aa9.87□□□□□ -0.83
MTM1-203ENST00000370396 MROH2BQ7Z745 1585 aa9.87□□□□□ -0.83
MTM1-203ENST00000370396 KDM6BO15054 1643 aa9.84□□□□□ -0.83
MTM1-203ENST00000370396 TOPBP1Q92547 1522 aa9.84□□□□□ -0.83
MTM1-203ENST00000370396 FBLN2P98095 1184 aa9.84□□□□□ -0.83
MTM1-203ENST00000370396 TARBP1Q13395 1621 aaKnown RBP9.82□□□□□ -0.84
MTM1-203ENST00000370396 MAGI1Q96QZ7 1491 aaPredicted RBP9.81□□□□□ -0.84
MTM1-203ENST00000370396 SYNJ2O15056 1496 aa9.81□□□□□ -0.84
MTM1-203ENST00000370396 AQRO60306 1485 aaKnown RBP eCLIP9.8□□□□□ -0.84
MTM1-203ENST00000370396 ADGRL1O94910 1474 aa9.8□□□□□ -0.84
MTM1-203ENST00000370396 ABCC10Q5T3U5 1492 aa9.79□□□□□ -0.84
MTM1-203ENST00000370396 DNMBPQ6XZF7 1577 aa9.78□□□□□ -0.84
MTM1-203ENST00000370396 ILDR2Q71H61 639 aa9.78□□□□□ -0.84
MTM1-203ENST00000370396 SLC4A1APQ9BWU0 796 aaKnown RBP9.77□□□□□ -0.85
MTM1-203ENST00000370396 FOXD1Q16676 465 aa9.76□□□□□ -0.85
MTM1-203ENST00000370396 DISP3Q9P2K9 1392 aa9.76□□□□□ -0.85
MTM1-203ENST00000370396 CHMP7Q8WUX9 453 aaPredicted RBP9.75□□□□□ -0.85
MTM1-203ENST00000370396 SNAPC4Q5SXM2 1469 aa9.74□□□□□ -0.85
MTM1-203ENST00000370396 MAPKBP1O60336 1514 aa9.74□□□□□ -0.85
MTM1-203ENST00000370396 DIP2BQ9P265 1576 aa9.71□□□□□ -0.86
MTM1-203ENST00000370396 TOP2BQ02880 1626 aa9.71□□□□□ -0.86
MTM1-203ENST00000370396 FAM69CQ0P6D2 419 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms