RNA–Protein interactions for RNA: ENST00000304743.6

PCNX1-201, Transcript of pecanex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNX1, Length 12,919 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-201ENST00000304743 DCAF8L2P0C7V8 631 aa13.48□□□□□ -0.25
PCNX1-201ENST00000304743 PELP1Q8IZL8 1130 aaKnown RBP13.4□□□□□ -0.26
PCNX1-201ENST00000304743 FAM9AQ8IZU1 332 aaPredicted RBP13□□□□□ -0.33
PCNX1-201ENST00000304743 ERICH6Q7L0X2 663 aa12.87□□□□□ -0.35
PCNX1-201ENST00000304743 CCER1Q8TC90 406 aaPredicted RBP12.79□□□□□ -0.36
PCNX1-201ENST00000304743 APLP2Q06481 763 aa12.62□□□□□ -0.39
PCNX1-201ENST00000304743 EHMT2Q96KQ7 1210 aa12.48□□□□□ -0.41
PCNX1-201ENST00000304743 MYT1Q01538 1121 aa12.37□□□□□ -0.43
PCNX1-201ENST00000304743 DAXXQ9UER7 740 aaPredicted RBP12.33□□□□□ -0.44
PCNX1-201ENST00000304743 YTHDC1Q96MU7 727 aaKnown RBP12.33□□□□□ -0.44
PCNX1-201ENST00000304743 MYT1LQ9UL68 1186 aa12.2□□□□□ -0.46
PCNX1-201ENST00000304743 ATP1B4Q9UN42 357 aaPredicted RBP12.19□□□□□ -0.46
PCNX1-201ENST00000304743 NEFLP07196 543 aa12.16□□□□□ -0.46
PCNX1-201ENST00000304743 SUPT5HO00267 1087 aaKnown RBP12.13□□□□□ -0.47
PCNX1-201ENST00000304743 CENPBP07199 599 aaPredicted RBP12.01□□□□□ -0.49
PCNX1-201ENST00000304743 TTBK1Q5TCY1 1321 aaPredicted RBP11.98□□□□□ -0.49
PCNX1-201ENST00000304743 SLC4A1APQ9BWU0 796 aaKnown RBP11.97□□□□□ -0.49
PCNX1-201ENST00000304743 CHIC1Q5VXU3 224 aa11.96□□□□□ -0.49
PCNX1-201ENST00000304743 RANGAP1P46060 587 aaPredicted RBP11.93□□□□□ -0.5
PCNX1-201ENST00000304743 ZNF316A6NFI3 1004 aaPredicted RBP11.87□□□□□ -0.51
PCNX1-201ENST00000304743 CLSPNQ9HAW4 1339 aa11.87□□□□□ -0.51
PCNX1-201ENST00000304743 POLR3GLQ9BT43 218 aa11.83□□□□□ -0.52
PCNX1-201ENST00000304743 SLC24A1O60721 1099 aa11.8□□□□□ -0.52
PCNX1-201ENST00000304743 ZBTB47Q9UFB7 747 aaPredicted RBP11.79□□□□□ -0.52
PCNX1-201ENST00000304743 PCGF6Q9BYE7 350 aa11.79□□□□□ -0.52
PCNX1-201ENST00000304743 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.73□□□□□ -0.53
PCNX1-201ENST00000304743 HNRNPUL2Q1KMD3 747 aaKnown RBP11.73□□□□□ -0.53
PCNX1-201ENST00000304743 RTL5Q5HYW3 569 aaPredicted RBP11.7□□□□□ -0.54
PCNX1-201ENST00000304743 CDK11BP21127 795 aaKnown RBP11.65□□□□□ -0.54
PCNX1-201ENST00000304743 CDK11AQ9UQ88 783 aaPredicted RBP11.65□□□□□ -0.54
PCNX1-201ENST00000304743 CNGB1Q14028 1251 aaPredicted RBP11.63□□□□□ -0.55
PCNX1-201ENST00000304743 BCL11AQ9H165 835 aa11.55□□□□□ -0.56
PCNX1-201ENST00000304743 BCANQ96GW7 911 aa11.52□□□□□ -0.57
PCNX1-201ENST00000304743 NEFMP07197 916 aa11.51□□□□□ -0.57
PCNX1-201ENST00000304743 UBTFP17480 764 aaKnown RBP11.5□□□□□ -0.57
PCNX1-201ENST00000304743 ZEB1P37275 1124 aaPredicted RBP11.48□□□□□ -0.57
PCNX1-201ENST00000304743 SHROOM4Q9ULL8 1493 aa11.46□□□□□ -0.58
PCNX1-201ENST00000304743 ANP32BQ92688 251 aaKnown RBP11.41□□□□□ -0.58
PCNX1-201ENST00000304743 NCBP3Q53F19 620 aaKnown RBP11.35□□□□□ -0.59
PCNX1-201ENST00000304743 ITGAEP38570 1179 aa11.33□□□□□ -0.6
PCNX1-201ENST00000304743 CANXP27824 592 aaKnown RBP11.32□□□□□ -0.6
PCNX1-201ENST00000304743 NPM2Q86SE8 214 aaKnown RBP11.3□□□□□ -0.6
PCNX1-201ENST00000304743 A0A0G2JS52 829 aa11.3□□□□□ -0.6
PCNX1-201ENST00000304743 HSP90AA1P07900 732 aaKnown RBP11.27□□□□□ -0.61
PCNX1-201ENST00000304743 ESF1Q9H501 851 aaKnown RBP11.27□□□□□ -0.61
PCNX1-201ENST00000304743 TULP1O00294 542 aaPredicted RBP11.26□□□□□ -0.61
PCNX1-201ENST00000304743 KRI1Q8N9T8 703 aaKnown RBP11.21□□□□□ -0.61
PCNX1-201ENST00000304743 TRIM41Q8WV44 630 aa11.21□□□□□ -0.61
PCNX1-201ENST00000304743 SCAF1Q9H7N4 1312 aaKnown RBP11.2□□□□□ -0.62
PCNX1-201ENST00000304743 PLPPR3Q6T4P5 718 aa11.17□□□□□ -0.62
PCNX1-201ENST00000304743 PPARGC1BQ86YN6 1023 aaKnown RBP11.14□□□□□ -0.63
PCNX1-201ENST00000304743 GLIPR1L2Q4G1C9 344 aa11.14□□□□□ -0.63
PCNX1-201ENST00000304743 PRM3Q9NNZ6 103 aa11.14□□□□□ -0.63
PCNX1-201ENST00000304743 EIF5BO60841 1220 aaKnown RBP11.13□□□□□ -0.63
PCNX1-201ENST00000304743 STAG3Q9UJ98 1225 aa11.09□□□□□ -0.63
PCNX1-201ENST00000304743 TRIM52Q96A61 297 aa11.05□□□□□ -0.64
PCNX1-201ENST00000304743 NPHP1O15259 732 aa11.05□□□□□ -0.64
PCNX1-201ENST00000304743 UPF2Q9HAU5 1272 aaKnown RBP11.03□□□□□ -0.64
PCNX1-201ENST00000304743 ZNF326Q5BKZ1 582 aaKnown RBP11□□□□□ -0.65
PCNX1-201ENST00000304743 CLSTN1O94985 981 aa10.99□□□□□ -0.65
PCNX1-201ENST00000304743 TRIM44Q96DX7 344 aaPredicted RBP10.99□□□□□ -0.65
PCNX1-201ENST00000304743 HAP1P54257 671 aaPredicted RBP10.98□□□□□ -0.65
PCNX1-201ENST00000304743 ZRSR1Q15695 479 aaKnown RBP10.97□□□□□ -0.65
PCNX1-201ENST00000304743 ANP32AP39687 249 aaKnown RBP10.95□□□□□ -0.66
PCNX1-201ENST00000304743 ARXQ96QS3 562 aa10.93□□□□□ -0.66
PCNX1-201ENST00000304743 DIEXFQ68CQ4 756 aaKnown RBP10.92□□□□□ -0.66
PCNX1-201ENST00000304743 TNNT2P45379 298 aaPredicted RBP10.91□□□□□ -0.66
PCNX1-201ENST00000304743 FBLN2P98095 1184 aa10.89□□□□□ -0.67
PCNX1-201ENST00000304743 FAM50AQ14320 339 aaKnown RBP10.88□□□□□ -0.67
PCNX1-201ENST00000304743 NCLP19338 710 aaKnown RBP10.86□□□□□ -0.67
PCNX1-201ENST00000304743 C14orf37Q86TY3 774 aa10.86□□□□□ -0.67
PCNX1-201ENST00000304743 CHGAP10645 457 aaKnown RBP10.86□□□□□ -0.67
PCNX1-201ENST00000304743 PLEKHG5O94827 1062 aa10.85□□□□□ -0.67
PCNX1-201ENST00000304743 ANP32CO43423 234 aa10.85□□□□□ -0.67
PCNX1-201ENST00000304743 ZBTB7CA1YPR0 619 aa10.84□□□□□ -0.67
PCNX1-201ENST00000304743 GOLGA2Q08379 1002 aa10.84□□□□□ -0.67
PCNX1-201ENST00000304743 MYH16Q9H6N6 1097 aa10.82□□□□□ -0.68
PCNX1-201ENST00000304743 FKBP8Q14318 412 aa10.82□□□□□ -0.68
PCNX1-201ENST00000304743 ANP32EQ9BTT0 268 aa10.8□□□□□ -0.68
PCNX1-201ENST00000304743 NEUROD1Q13562 356 aa10.8□□□□□ -0.68
PCNX1-201ENST00000304743 NPM1P06748 294 aaKnown RBP eCLIP10.78□□□□□ -0.68
PCNX1-201ENST00000304743 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.77□□□□□ -0.69
PCNX1-201ENST00000304743 L1TD1Q5T7N2 865 aaKnown RBP10.76□□□□□ -0.69
PCNX1-201ENST00000304743 DNTTIP2Q5QJE6 756 aaKnown RBP10.75□□□□□ -0.69
PCNX1-201ENST00000304743 ISY1Q9ULR0 285 aaKnown RBP10.75□□□□□ -0.69
PCNX1-201ENST00000304743 TAOK2Q9UL54 1235 aa10.74□□□□□ -0.69
PCNX1-201ENST00000304743 NRDCO43847 1150 aa10.72□□□□□ -0.69
PCNX1-201ENST00000304743 GOLGA6L6A8MZA4 724 aa10.71□□□□□ -0.69
PCNX1-201ENST00000304743 TMX4Q9H1E5 349 aaPredicted RBP10.71□□□□□ -0.69
PCNX1-201ENST00000304743 HRCP23327 699 aa10.71□□□□□ -0.69
PCNX1-201ENST00000304743 GOLGA6L22H0YM25 854 aa10.7□□□□□ -0.7
PCNX1-201ENST00000304743 KIAA2012Q0VF49 1180 aa10.7□□□□□ -0.7
PCNX1-201ENST00000304743 PTMAP06454 111 aaKnown RBP10.7□□□□□ -0.7
PCNX1-201ENST00000304743 NOC3LQ8WTT2 800 aaKnown RBP10.7□□□□□ -0.7
PCNX1-201ENST00000304743 CNKSR2Q8WXI2 1034 aa10.69□□□□□ -0.7
PCNX1-201ENST00000304743 PNNQ9H307 717 aaKnown RBP10.68□□□□□ -0.7
PCNX1-201ENST00000304743 TRIM26Q12899 539 aaPredicted RBP10.68□□□□□ -0.7
PCNX1-201ENST00000304743 CHAF1AQ13111 956 aaPredicted RBP10.66□□□□□ -0.7
PCNX1-201ENST00000304743 FBXO3Q9UK99 471 aa10.66□□□□□ -0.7
PCNX1-201ENST00000304743 DCAF8L1A6NGE4 600 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms