RNA–Protein interactions for RNA: ENST00000635406.1

ATP7B-216, Transcript of ATPase copper transporting beta, humanhuman

TSL 4

Gene ATP7B, Length 506 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7B-216ENST00000635406 NISCHQ9Y2I1 1504 aa51.3■■■■■ 5.8
ATP7B-216ENST00000635406 CCDC180Q9P1Z9 1646 aa45.7■■■■■ 4.91
ATP7B-216ENST00000635406 ABCC9O60706 1549 aa44.79■■■■■ 4.76
ATP7B-216ENST00000635406 RB1CC1Q8TDY2 1594 aa43■■■■■ 4.47
ATP7B-216ENST00000635406 NACADO15069 1562 aa42.91■■■■■ 4.46
ATP7B-216ENST00000635406 DCAF8L2P0C7V8 631 aa42.78■■■■■ 4.44
ATP7B-216ENST00000635406 ZCCHC6Q5VYS8 1495 aaKnown RBP42.76■■■■■ 4.44
ATP7B-216ENST00000635406 MYO15BQ96JP2 1530 aa42.59■■■■■ 4.41
ATP7B-216ENST00000635406 DCAF1Q9Y4B6 1507 aa42.41■■■■■ 4.38
ATP7B-216ENST00000635406 UNC13AQ9UPW8 1703 aa42.2■■■■■ 4.35
ATP7B-216ENST00000635406 BICRAQ9NZM4 1560 aa41.8■■■■■ 4.28
ATP7B-216ENST00000635406 PABPN1Q86U42 306 aaKnown RBP eCLIP41.78■■■■■ 4.28
ATP7B-216ENST00000635406 SCRIBQ14160 1630 aa41.74■■■■■ 4.27
ATP7B-216ENST00000635406 SHROOM4Q9ULL8 1493 aa41.21■■■■■ 4.19
ATP7B-216ENST00000635406 DNAJC5BQ9UF47 199 aa41.15■■■■■ 4.18
ATP7B-216ENST00000635406 EIF4G1Q04637 1599 aaKnown RBP40.66■■■■■ 4.1
ATP7B-216ENST00000635406 CC2D2AQ9P2K1 1620 aa40.53■■■■■ 4.08
ATP7B-216ENST00000635406 CECR2Q9BXF3 1484 aa40.21■■■■■ 4.03
ATP7B-216ENST00000635406 SMARCA4P51532 1647 aa39.89■■■■□ 3.98
ATP7B-216ENST00000635406 BAZ1AQ9NRL2 1556 aaPredicted RBP39.76■■■■□ 3.95
ATP7B-216ENST00000635406 ATAD2BQ9ULI0 1458 aa39.63■■■■□ 3.94
ATP7B-216ENST00000635406 MROH2BQ7Z745 1585 aa39.59■■■■□ 3.93
ATP7B-216ENST00000635406 NCAPD3P42695 1498 aa39.56■■■■□ 3.92
ATP7B-216ENST00000635406 SMARCA2P51531 1590 aa39.55■■■■□ 3.92
ATP7B-216ENST00000635406 PEG3Q9GZU2 1588 aa39.46■■■■□ 3.91
ATP7B-216ENST00000635406 HMGXB3Q12766 1538 aa39.44■■■■□ 3.9
ATP7B-216ENST00000635406 BAZ1BQ9UIG0 1483 aaKnown RBP39.3■■■■□ 3.88
ATP7B-216ENST00000635406 WIZO95785 1651 aa39.19■■■■□ 3.86
ATP7B-216ENST00000635406 RSF1Q96T23 1441 aaPredicted RBP39.05■■■■□ 3.84
ATP7B-216ENST00000635406 NESP48681 1621 aa38.77■■■■□ 3.8
ATP7B-216ENST00000635406 TOP2AP11388 1531 aaKnown RBP38.73■■■■□ 3.79
ATP7B-216ENST00000635406 LAMC3Q9Y6N6 1575 aa38.59■■■■□ 3.77
ATP7B-216ENST00000635406 ERCC6Q03468 1493 aa38.55■■■■□ 3.76
ATP7B-216ENST00000635406 CADPSQ9ULU8 1353 aa38.4■■■■□ 3.74
ATP7B-216ENST00000635406 KIF21AQ7Z4S6 1674 aa38.36■■■■□ 3.73
ATP7B-216ENST00000635406 PDS5BQ9NTI5 1447 aa38.25■■■■□ 3.71
ATP7B-216ENST00000635406 THOC2Q8NI27 1593 aaKnown RBP38.23■■■■□ 3.71
ATP7B-216ENST00000635406 CCDC88BA6NC98 1476 aa38.23■■■■□ 3.71
ATP7B-216ENST00000635406 CFTRP13569 1480 aa38.2■■■■□ 3.71
ATP7B-216ENST00000635406 CUX2O14529 1486 aa38.16■■■■□ 3.7
ATP7B-216ENST00000635406 PRDM2Q13029 1718 aa38.04■■■■□ 3.68
ATP7B-216ENST00000635406 FANCD2Q9BXW9 1451 aa38.03■■■■□ 3.68
ATP7B-216ENST00000635406 CEP164Q9UPV0 1460 aa37.98■■■■□ 3.67
ATP7B-216ENST00000635406 MRC2Q9UBG0 1479 aa37.95■■■■□ 3.67
ATP7B-216ENST00000635406 SUPT5HO00267 1087 aaKnown RBP37.94■■■■□ 3.66
ATP7B-216ENST00000635406 WDR62O43379 1518 aa37.87■■■■□ 3.65
ATP7B-216ENST00000635406 URB2Q14146 1524 aaKnown RBP37.7■■■■□ 3.63
ATP7B-216ENST00000635406 TOPBP1Q92547 1522 aa37.43■■■■□ 3.58
ATP7B-216ENST00000635406 DNMBPQ6XZF7 1577 aa37.38■■■■□ 3.58
ATP7B-216ENST00000635406 ABCC8Q09428 1581 aa37.29■■■■□ 3.56
ATP7B-216ENST00000635406 CUX1P39880 1505 aa37.15■■■■□ 3.54
ATP7B-216ENST00000635406 IFT140Q96RY7 1462 aa37.15■■■■□ 3.54
ATP7B-216ENST00000635406 POLA1P09884 1462 aaPredicted RBP37.11■■■■□ 3.53
ATP7B-216ENST00000635406 ZNF608Q9ULD9 1512 aaPredicted RBP37.08■■■■□ 3.53
ATP7B-216ENST00000635406 TARBP1Q13395 1621 aaKnown RBP37.07■■■■□ 3.52
ATP7B-216ENST00000635406 FGD5Q6ZNL6 1462 aa37.01■■■■□ 3.52
ATP7B-216ENST00000635406 DNAJC5Q9H3Z4 198 aa37.01■■■■□ 3.52
ATP7B-216ENST00000635406 EIF4G3O43432 1585 aaKnown RBP36.97■■■■□ 3.51
ATP7B-216ENST00000635406 RAD54L2Q9Y4B4 1467 aa36.96■■■■□ 3.51
ATP7B-216ENST00000635406 SOGA1O94964 1423 aa36.87■■■■□ 3.49
ATP7B-216ENST00000635406 SYNJ1O43426 1573 aa36.83■■■■□ 3.49
ATP7B-216ENST00000635406 AQRO60306 1485 aaKnown RBP eCLIP36.82■■■■□ 3.486e-11■■■■□ 25.1
ATP7B-216ENST00000635406 BIVM-ERCC5R4GMW8 1640 aa36.81■■■■□ 3.48
ATP7B-216ENST00000635406 WDR97A6NE52 1622 aa36.81■■■■□ 3.48
ATP7B-216ENST00000635406 WRNQ14191 1432 aaPredicted RBP eCLIP36.8■■■■□ 3.48
ATP7B-216ENST00000635406 TOP2BQ02880 1626 aa36.79■■■■□ 3.48
ATP7B-216ENST00000635406 TDRD9Q8NDG6 1382 aaKnown RBP36.7■■■■□ 3.47
ATP7B-216ENST00000635406 ABCA10Q8WWZ4 1543 aa36.62■■■■□ 3.45
ATP7B-216ENST00000635406 ABCA5Q8WWZ7 1642 aa36.56■■■■□ 3.44
ATP7B-216ENST00000635406 CHD1O14646 1710 aa36.55■■■■□ 3.44
ATP7B-216ENST00000635406 PBRM1Q86U86 1689 aa36.54■■■■□ 3.44
ATP7B-216ENST00000635406 SNAPC4Q5SXM2 1469 aa36.51■■■■□ 3.44
ATP7B-216ENST00000635406 GAPVD1Q14C86 1478 aa36.49■■■■□ 3.43
ATP7B-216ENST00000635406 GRIN2BQ13224 1484 aa36.48■■■■□ 3.43
ATP7B-216ENST00000635406 OSCARQ8IYS5 282 aa36.46■■■■□ 3.43
ATP7B-216ENST00000635406 MAGI1Q96QZ7 1491 aaPredicted RBP36.4■■■■□ 3.42
ATP7B-216ENST00000635406 FBLN2P98095 1184 aa36.31■■■■□ 3.4
ATP7B-216ENST00000635406 SYNJ2O15056 1496 aa36.26■■■■□ 3.4
ATP7B-216ENST00000635406 ADAMTS12P58397 1594 aa36.23■■■■□ 3.39
ATP7B-216ENST00000635406 ERICH3Q5RHP9 1530 aa36.17■■■■□ 3.38
ATP7B-216ENST00000635406 CHMP7Q8WUX9 453 aaPredicted RBP36.16■■■■□ 3.38
ATP7B-216ENST00000635406 CLASP1Q7Z460 1538 aa36.1■■■■□ 3.37
ATP7B-216ENST00000635406 RIMBP3CA6NJZ7 1639 aa36.09■■■■□ 3.37
ATP7B-216ENST00000635406 RIMBP3BA6NNM3 1639 aa36.09■■■■□ 3.37
ATP7B-216ENST00000635406 RIMBP3Q9UFD9 1639 aa36.09■■■■□ 3.37
ATP7B-216ENST00000635406 GRIN2AQ12879 1464 aa36.05■■■■□ 3.36
ATP7B-216ENST00000635406 ARHGEF11O15085 1522 aa36.04■■■■□ 3.36
ATP7B-216ENST00000635406 FHAD1B1AJZ9 1412 aa36.03■■■■□ 3.36
ATP7B-216ENST00000635406 KIF27Q86VH2 1401 aa36■■■■□ 3.35
ATP7B-216ENST00000635406 CEP170Q5SW79 1584 aa35.94■■■■□ 3.34
ATP7B-216ENST00000635406 NUP160Q12769 1436 aa35.88■■■■□ 3.33
ATP7B-216ENST00000635406 CUL7Q14999 1698 aa35.87■■■■□ 3.33
ATP7B-216ENST00000635406 IGF1RP08069 1367 aa35.87■■■■□ 3.33
ATP7B-216ENST00000635406 TRIM41Q8WV44 630 aa35.84■■■■□ 3.33
ATP7B-216ENST00000635406 ARAP1Q96P48 1450 aa35.77■■■■□ 3.32
ATP7B-216ENST00000635406 RUSC2Q8N2Y8 1516 aa35.77■■■■□ 3.32
ATP7B-216ENST00000635406 SHROOM2Q13796 1616 aa35.68■■■■□ 3.3
ATP7B-216ENST00000635406 ERCC6L2Q5T890 1561 aa35.65■■■■□ 3.3
ATP7B-216ENST00000635406 CARMIL1Q5VZK9 1371 aa35.64■■■■□ 3.3
ATP7B-216ENST00000635406 CYB5RLQ6IPT4 315 aa35.59■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms