Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH20Q9HBT6 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH20Q9HBT6 AC018445.3-201ENST00000624177 1945 ntBASIC16.43■□□□□ 0.22
CDH20Q9HBT6 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.43■□□□□ 0.22
CDH20Q9HBT6 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH20Q9HBT6 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.43■□□□□ 0.22
CDH20Q9HBT6 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH20Q9HBT6 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH20Q9HBT6 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.43■□□□□ 0.22
CDH20Q9HBT6 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH20Q9HBT6 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH20Q9HBT6 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH20Q9HBT6 AL161938.1-201ENST00000569833 2180 ntBASIC16.43■□□□□ 0.22
CDH20Q9HBT6 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CDH20Q9HBT6 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH20Q9HBT6 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH20Q9HBT6 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH20Q9HBT6 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH20Q9HBT6 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.43■□□□□ 0.22
CDH20Q9HBT6 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH20Q9HBT6 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.43■□□□□ 0.22
CDH20Q9HBT6 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
CDH20Q9HBT6 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH20Q9HBT6 CCR12P-201ENST00000446203 998 ntBASIC16.43■□□□□ 0.22
CDH20Q9HBT6 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.43■□□□□ 0.22
CDH20Q9HBT6 CA15P1-201ENST00000481698 905 ntBASIC16.43■□□□□ 0.22
CDH20Q9HBT6 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.43■□□□□ 0.22
CDH20Q9HBT6 AC073912.3-201ENST00000624414 853 ntBASIC16.43■□□□□ 0.22
CDH20Q9HBT6 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CDH20Q9HBT6 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH20Q9HBT6 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CDH20Q9HBT6 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH20Q9HBT6 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CDH20Q9HBT6 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH20Q9HBT6 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.43■□□□□ 0.22
CDH20Q9HBT6 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH20Q9HBT6 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH20Q9HBT6 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH20Q9HBT6 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.43■□□□□ 0.22
CDH20Q9HBT6 LETM1P2-201ENST00000597330 2178 ntBASIC16.43■□□□□ 0.22
CDH20Q9HBT6 AC026471.1-201ENST00000564629 3026 ntBASIC16.43■□□□□ 0.22
CDH20Q9HBT6 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH20Q9HBT6 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CDH20Q9HBT6 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDH20Q9HBT6 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH20Q9HBT6 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH20Q9HBT6 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.42■□□□□ 0.22
CDH20Q9HBT6 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH20Q9HBT6 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH20Q9HBT6 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH20Q9HBT6 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDH20Q9HBT6 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH20Q9HBT6 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.42■□□□□ 0.22
CDH20Q9HBT6 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CDH20Q9HBT6 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.42■□□□□ 0.22
CDH20Q9HBT6 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH20Q9HBT6 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CDH20Q9HBT6 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.42■□□□□ 0.22
CDH20Q9HBT6 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.42■□□□□ 0.22
CDH20Q9HBT6 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH20Q9HBT6 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CDH20Q9HBT6 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH20Q9HBT6 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.42■□□□□ 0.22
CDH20Q9HBT6 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH20Q9HBT6 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
CDH20Q9HBT6 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.42■□□□□ 0.22
CDH20Q9HBT6 PKD1P1-201ENST00000458669 6805 ntBASIC16.42■□□□□ 0.22
CDH20Q9HBT6 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.42■□□□□ 0.22
CDH20Q9HBT6 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH20Q9HBT6 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.42■□□□□ 0.22
CDH20Q9HBT6 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.42■□□□□ 0.22
CDH20Q9HBT6 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CDH20Q9HBT6 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDH20Q9HBT6 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.41■□□□□ 0.22
CDH20Q9HBT6 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CDH20Q9HBT6 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDH20Q9HBT6 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDH20Q9HBT6 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.41■□□□□ 0.22
CDH20Q9HBT6 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.41■□□□□ 0.22
CDH20Q9HBT6 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH20Q9HBT6 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CDH20Q9HBT6 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
CDH20Q9HBT6 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.41■□□□□ 0.22
CDH20Q9HBT6 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH20Q9HBT6 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH20Q9HBT6 SLC25A1P2-201ENST00000430693 912 ntBASIC16.41■□□□□ 0.22
CDH20Q9HBT6 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDH20Q9HBT6 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.41■□□□□ 0.22
CDH20Q9HBT6 AC128688.1-201ENST00000487626 519 ntBASIC16.41■□□□□ 0.22
CDH20Q9HBT6 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDH20Q9HBT6 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.41■□□□□ 0.22
CDH20Q9HBT6 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.41■□□□□ 0.22
CDH20Q9HBT6 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH20Q9HBT6 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH20Q9HBT6 AC116562.4-202ENST00000641738 218 ntBASIC16.41■□□□□ 0.22
CDH20Q9HBT6 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDH20Q9HBT6 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH20Q9HBT6 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDH20Q9HBT6 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH20Q9HBT6 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 147.3 ms