RNA–Protein interactions for RNA: ENST00000627282.2

CNOT9-209, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 2 BASIC

Gene CNOT9, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-209ENST00000627282 NISCHQ9Y2I1 1504 aa45.41■■■■■ 4.86
CNOT9-209ENST00000627282 CCDC180Q9P1Z9 1646 aa40.46■■■■■ 4.07
CNOT9-209ENST00000627282 ABCC9O60706 1549 aa39.77■■■■□ 3.96
CNOT9-209ENST00000627282 RB1CC1Q8TDY2 1594 aa38.17■■■■□ 3.7
CNOT9-209ENST00000627282 NACADO15069 1562 aa38.1■■■■□ 3.69
CNOT9-209ENST00000627282 DCAF8L2P0C7V8 631 aa37.97■■■■□ 3.67
CNOT9-209ENST00000627282 ZCCHC6Q5VYS8 1495 aaKnown RBP37.91■■■■□ 3.66
CNOT9-209ENST00000627282 MYO15BQ96JP2 1530 aa37.82■■■■□ 3.65
CNOT9-209ENST00000627282 DCAF1Q9Y4B6 1507 aa37.58■■■■□ 3.61
CNOT9-209ENST00000627282 UNC13AQ9UPW8 1703 aa37.28■■■■□ 3.56
CNOT9-209ENST00000627282 PABPN1Q86U42 306 aaKnown RBP eCLIP37.11■■■■□ 3.53
CNOT9-209ENST00000627282 BICRAQ9NZM4 1560 aa37.04■■■■□ 3.52
CNOT9-209ENST00000627282 SCRIBQ14160 1630 aa36.89■■■■□ 3.5
CNOT9-209ENST00000627282 DNAJC5BQ9UF47 199 aa36.67■■■■□ 3.46
CNOT9-209ENST00000627282 SHROOM4Q9ULL8 1493 aa36.66■■■■□ 3.46
CNOT9-209ENST00000627282 EIF4G1Q04637 1599 aaKnown RBP36.07■■■■□ 3.36
CNOT9-209ENST00000627282 CC2D2AQ9P2K1 1620 aa35.96■■■■□ 3.35
CNOT9-209ENST00000627282 CECR2Q9BXF3 1484 aa35.76■■■■□ 3.32
CNOT9-209ENST00000627282 SMARCA4P51532 1647 aa35.28■■■■□ 3.24
CNOT9-209ENST00000627282 BAZ1AQ9NRL2 1556 aaPredicted RBP35.21■■■■□ 3.23
CNOT9-209ENST00000627282 NCAPD3P42695 1498 aa35.16■■■■□ 3.22
CNOT9-209ENST00000627282 ATAD2BQ9ULI0 1458 aa35.15■■■■□ 3.22
CNOT9-209ENST00000627282 SMARCA2P51531 1590 aa35.09■■■■□ 3.21
CNOT9-209ENST00000627282 MROH2BQ7Z745 1585 aa35■■■■□ 3.19
CNOT9-209ENST00000627282 HMGXB3Q12766 1538 aa34.97■■■■□ 3.19
CNOT9-209ENST00000627282 PEG3Q9GZU2 1588 aa34.96■■■■□ 3.19
CNOT9-209ENST00000627282 BAZ1BQ9UIG0 1483 aaKnown RBP34.84■■■■□ 3.17
CNOT9-209ENST00000627282 RSF1Q96T23 1441 aaPredicted RBP34.78■■■■□ 3.16
CNOT9-209ENST00000627282 WIZO95785 1651 aa34.63■■■■□ 3.13
CNOT9-209ENST00000627282 NESP48681 1621 aa34.36■■■■□ 3.09
CNOT9-209ENST00000627282 ERCC6Q03468 1493 aa34.29■■■■□ 3.08
CNOT9-209ENST00000627282 TOP2AP11388 1531 aaKnown RBP34.28■■■■□ 3.08
CNOT9-209ENST00000627282 SUPT5HO00267 1087 aaKnown RBP34.25■■■■□ 3.07
CNOT9-209ENST00000627282 LAMC3Q9Y6N6 1575 aa34.25■■■■□ 3.07
CNOT9-209ENST00000627282 CADPSQ9ULU8 1353 aa34.11■■■■□ 3.05
CNOT9-209ENST00000627282 PDS5BQ9NTI5 1447 aa34.02■■■■□ 3.04
CNOT9-209ENST00000627282 CUX2O14529 1486 aa34.01■■■■□ 3.04
CNOT9-209ENST00000627282 KIF21AQ7Z4S6 1674 aa33.94■■■■□ 3.02
CNOT9-209ENST00000627282 CCDC88BA6NC98 1476 aa33.9■■■■□ 3.02
CNOT9-209ENST00000627282 THOC2Q8NI27 1593 aaKnown RBP33.89■■■■□ 3.02
CNOT9-209ENST00000627282 CFTRP13569 1480 aa33.88■■■■□ 3.01
CNOT9-209ENST00000627282 FANCD2Q9BXW9 1451 aa33.72■■■□□ 2.99
CNOT9-209ENST00000627282 CEP164Q9UPV0 1460 aa33.7■■■□□ 2.99
CNOT9-209ENST00000627282 MRC2Q9UBG0 1479 aa33.69■■■□□ 2.98
CNOT9-209ENST00000627282 WDR62O43379 1518 aa33.6■■■□□ 2.97
CNOT9-209ENST00000627282 PRDM2Q13029 1718 aa33.58■■■□□ 2.97
CNOT9-209ENST00000627282 URB2Q14146 1524 aaKnown RBP33.41■■■□□ 2.94
CNOT9-209ENST00000627282 DNAJC5Q9H3Z4 198 aa33.19■■■□□ 2.9
CNOT9-209ENST00000627282 TOPBP1Q92547 1522 aa33.17■■■□□ 2.9
CNOT9-209ENST00000627282 ABCC8Q09428 1581 aa33.14■■■□□ 2.9
CNOT9-209ENST00000627282 DNMBPQ6XZF7 1577 aa33.11■■■□□ 2.89
CNOT9-209ENST00000627282 IFT140Q96RY7 1462 aa33■■■□□ 2.87
CNOT9-209ENST00000627282 POLA1P09884 1462 aaPredicted RBP32.87■■■□□ 2.85
CNOT9-209ENST00000627282 ZNF608Q9ULD9 1512 aaPredicted RBP32.87■■■□□ 2.85
CNOT9-209ENST00000627282 CUX1P39880 1505 aa32.85■■■□□ 2.85
CNOT9-209ENST00000627282 TARBP1Q13395 1621 aaKnown RBP32.82■■■□□ 2.85
CNOT9-209ENST00000627282 FGD5Q6ZNL6 1462 aa32.76■■■□□ 2.83
CNOT9-209ENST00000627282 WRNQ14191 1432 aaPredicted RBP eCLIP32.75■■■□□ 2.83
CNOT9-209ENST00000627282 EIF4G3O43432 1585 aaKnown RBP32.74■■■□□ 2.83
CNOT9-209ENST00000627282 SOGA1O94964 1423 aa32.72■■■□□ 2.83
CNOT9-209ENST00000627282 RAD54L2Q9Y4B4 1467 aa32.72■■■□□ 2.83
CNOT9-209ENST00000627282 SYNJ1O43426 1573 aa32.67■■■□□ 2.82
CNOT9-209ENST00000627282 AQRO60306 1485 aaKnown RBP eCLIP32.65■■■□□ 2.822e-7■■■■■ 39.2
CNOT9-209ENST00000627282 TOP2BQ02880 1626 aa32.62■■■□□ 2.81
CNOT9-209ENST00000627282 BIVM-ERCC5R4GMW8 1640 aa32.6■■■□□ 2.81
CNOT9-209ENST00000627282 TDRD9Q8NDG6 1382 aaKnown RBP32.57■■■□□ 2.8
CNOT9-209ENST00000627282 WDR97A6NE52 1622 aa32.55■■■□□ 2.8
CNOT9-209ENST00000627282 OSCARQ8IYS5 282 aa32.55■■■□□ 2.8
CNOT9-209ENST00000627282 ABCA10Q8WWZ4 1543 aa32.45■■■□□ 2.78
CNOT9-209ENST00000627282 GRIN2BQ13224 1484 aa32.38■■■□□ 2.77
CNOT9-209ENST00000627282 SNAPC4Q5SXM2 1469 aa32.35■■■□□ 2.77
CNOT9-209ENST00000627282 GAPVD1Q14C86 1478 aa32.34■■■□□ 2.77
CNOT9-209ENST00000627282 CHD1O14646 1710 aa32.34■■■□□ 2.77
CNOT9-209ENST00000627282 ABCA5Q8WWZ7 1642 aa32.33■■■□□ 2.77
CNOT9-209ENST00000627282 MAGI1Q96QZ7 1491 aaPredicted RBP32.32■■■□□ 2.76
CNOT9-209ENST00000627282 TRIM41Q8WV44 630 aa32.29■■■□□ 2.76
CNOT9-209ENST00000627282 PBRM1Q86U86 1689 aa32.28■■■□□ 2.76
CNOT9-209ENST00000627282 FBLN2P98095 1184 aa32.27■■■□□ 2.76
CNOT9-209ENST00000627282 CHIC1Q5VXU3 224 aa32.26■■■□□ 2.75
CNOT9-209ENST00000627282 SYNJ2O15056 1496 aa32.19■■■□□ 2.74
CNOT9-209ENST00000627282 CHMP7Q8WUX9 453 aaPredicted RBP32.17■■■□□ 2.74
CNOT9-209ENST00000627282 RIMBP3CA6NJZ7 1639 aa32.06■■■□□ 2.72
CNOT9-209ENST00000627282 RIMBP3BA6NNM3 1639 aa32.06■■■□□ 2.72
CNOT9-209ENST00000627282 RIMBP3Q9UFD9 1639 aa32.06■■■□□ 2.72
CNOT9-209ENST00000627282 ERICH3Q5RHP9 1530 aa32.05■■■□□ 2.72
CNOT9-209ENST00000627282 ARHGEF11O15085 1522 aa32.05■■■□□ 2.72
CNOT9-209ENST00000627282 ADAMTS12P58397 1594 aa32.03■■■□□ 2.72
CNOT9-209ENST00000627282 CLASP1Q7Z460 1538 aa32.01■■■□□ 2.72
CNOT9-209ENST00000627282 KIF27Q86VH2 1401 aa32.01■■■□□ 2.72
CNOT9-209ENST00000627282 FHAD1B1AJZ9 1412 aa31.97■■■□□ 2.71
CNOT9-209ENST00000627282 GRIN2AQ12879 1464 aa31.96■■■□□ 2.71
CNOT9-209ENST00000627282 RUSC2Q8N2Y8 1516 aa31.94■■■□□ 2.7
CNOT9-209ENST00000627282 IGF1RP08069 1367 aa31.87■■■□□ 2.69
CNOT9-209ENST00000627282 NUP160Q12769 1436 aa31.84■■■□□ 2.69
CNOT9-209ENST00000627282 CEP170Q5SW79 1584 aa31.8■■■□□ 2.68
CNOT9-209ENST00000627282 ARAP1Q96P48 1450 aa31.77■■■□□ 2.68
CNOT9-209ENST00000627282 CYB5RLQ6IPT4 315 aa31.73■■■□□ 2.67
CNOT9-209ENST00000627282 CUL7Q14999 1698 aa31.71■■■□□ 2.67
CNOT9-209ENST00000627282 EEA1Q15075 1411 aa31.7■■■□□ 2.66
CNOT9-209ENST00000627282 CARMIL1Q5VZK9 1371 aa31.66■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms