RNA–Protein interactions for RNA: ENST00000309890.11

ATP2A3-201, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 5 BASIC

Gene ATP2A3, Length 4,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-201ENST00000309890 NISCHQ9Y2I1 1504 aa30.99■■■□□ 2.55
ATP2A3-201ENST00000309890 DCAF8L2P0C7V8 631 aa30.56■■■□□ 2.48
ATP2A3-201ENST00000309890 SUPT5HO00267 1087 aaKnown RBP29.84■■■□□ 2.37
ATP2A3-201ENST00000309890 SHROOM4Q9ULL8 1493 aa29.37■■■□□ 2.29
ATP2A3-201ENST00000309890 EHMT2Q96KQ7 1210 aa28.34■■■□□ 2.13
ATP2A3-201ENST00000309890 PCGF6Q9BYE7 350 aa28.29■■■□□ 2.12
ATP2A3-201ENST00000309890 FAM9AQ8IZU1 332 aaPredicted RBP27.98■■■□□ 2.07
ATP2A3-201ENST00000309890 PELP1Q8IZL8 1130 aaKnown RBP27.9■■■□□ 2.06
ATP2A3-201ENST00000309890 ZEB1P37275 1124 aaPredicted RBP27.84■■■□□ 2.05
ATP2A3-201ENST00000309890 APLP2Q06481 763 aa27.84■■■□□ 2.05
ATP2A3-201ENST00000309890 TRIM41Q8WV44 630 aa27.7■■■□□ 2.02
ATP2A3-201ENST00000309890 CENPBP07199 599 aaPredicted RBP27.5■■□□□ 1.99
ATP2A3-201ENST00000309890 TTBK1Q5TCY1 1321 aaPredicted RBP27.49■■□□□ 1.99
ATP2A3-201ENST00000309890 CCER1Q8TC90 406 aaPredicted RBP27.44■■□□□ 1.98
ATP2A3-201ENST00000309890 HRCP23327 699 aa27.37■■□□□ 1.97
ATP2A3-201ENST00000309890 TRIM26Q12899 539 aaPredicted RBP27.27■■□□□ 1.96
ATP2A3-201ENST00000309890 CHIC1Q5VXU3 224 aa27.23■■□□□ 1.95
ATP2A3-201ENST00000309890 UBTFP17480 764 aaKnown RBP27.1■■□□□ 1.93
ATP2A3-201ENST00000309890 RANGAP1P46060 587 aaPredicted RBP27■■□□□ 1.91
ATP2A3-201ENST00000309890 LOC105371045A0A1W2PR82 267 aa26.96■■□□□ 1.91
ATP2A3-201ENST00000309890 PPARGC1BQ86YN6 1023 aaKnown RBP26.87■■□□□ 1.89
ATP2A3-201ENST00000309890 MYT1Q01538 1121 aa26.74■■□□□ 1.87
ATP2A3-201ENST00000309890 YTHDC1Q96MU7 727 aaKnown RBP26.73■■□□□ 1.87
ATP2A3-201ENST00000309890 ATP1B4Q9UN42 357 aaPredicted RBP26.61■■□□□ 1.85
ATP2A3-201ENST00000309890 ERICH6Q7L0X2 663 aa26.59■■□□□ 1.85
ATP2A3-201ENST00000309890 NEFLP07196 543 aa26.54■■□□□ 1.84
ATP2A3-201ENST00000309890 HNRNPUL2Q1KMD3 747 aaKnown RBP26.28■■□□□ 1.8
ATP2A3-201ENST00000309890 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.27■■□□□ 1.8
ATP2A3-201ENST00000309890 DIEXFQ68CQ4 756 aaKnown RBP26.21■■□□□ 1.79
ATP2A3-201ENST00000309890 ITGAEP38570 1179 aa26.12■■□□□ 1.77
ATP2A3-201ENST00000309890 ZCCHC6Q5VYS8 1495 aaKnown RBP25.81■■□□□ 1.72
ATP2A3-201ENST00000309890 DCAF1Q9Y4B6 1507 aa25.79■■□□□ 1.72
ATP2A3-201ENST00000309890 GTF3C3Q9Y5Q9 886 aa25.77■■□□□ 1.72
ATP2A3-201ENST00000309890 ABCC9O60706 1549 aa25.74■■□□□ 1.71
ATP2A3-201ENST00000309890 ZNF316A6NFI3 1004 aaPredicted RBP25.68■■□□□ 1.7
ATP2A3-201ENST00000309890 ACIN1Q9UKV3 1341 aaKnown RBP25.62■■□□□ 1.69
ATP2A3-201ENST00000309890 POLR3GLQ9BT43 218 aa25.6■■□□□ 1.69
ATP2A3-201ENST00000309890 CSRNP3Q8WYN3 585 aa25.56■■□□□ 1.68
ATP2A3-201ENST00000309890 FAM50AQ14320 339 aaKnown RBP25.55■■□□□ 1.68
ATP2A3-201ENST00000309890 PABPN1Q86U42 306 aaKnown RBP eCLIP25.52■■□□□ 1.68
ATP2A3-201ENST00000309890 DAXXQ9UER7 740 aaPredicted RBP25.43■■□□□ 1.66
ATP2A3-201ENST00000309890 NEUROD1Q13562 356 aa25.41■■□□□ 1.66
ATP2A3-201ENST00000309890 CNGB1Q14028 1251 aaPredicted RBP25.37■■□□□ 1.65
ATP2A3-201ENST00000309890 ANP32CO43423 234 aa25.33■■□□□ 1.64
ATP2A3-201ENST00000309890 CCDC180Q9P1Z9 1646 aa25.32■■□□□ 1.64
ATP2A3-201ENST00000309890 MYO15BQ96JP2 1530 aa25.28■■□□□ 1.64
ATP2A3-201ENST00000309890 BCANQ96GW7 911 aa25.27■■□□□ 1.64
ATP2A3-201ENST00000309890 TRIM52Q96A61 297 aa25.26■■□□□ 1.64
ATP2A3-201ENST00000309890 SCRIBQ14160 1630 aa25.26■■□□□ 1.63
ATP2A3-201ENST00000309890 RTL5Q5HYW3 569 aaPredicted RBP25.18■■□□□ 1.62
ATP2A3-201ENST00000309890 MYT1LQ9UL68 1186 aa25.15■■□□□ 1.62
ATP2A3-201ENST00000309890 CLSPNQ9HAW4 1339 aa25.14■■□□□ 1.62
ATP2A3-201ENST00000309890 CDK11AQ9UQ88 783 aaPredicted RBP25.1■■□□□ 1.61
ATP2A3-201ENST00000309890 SCAF1Q9H7N4 1312 aaKnown RBP25■■□□□ 1.59
ATP2A3-201ENST00000309890 RSF1Q96T23 1441 aaPredicted RBP24.94■■□□□ 1.58
ATP2A3-201ENST00000309890 P3H3Q8IVL6 736 aa24.94■■□□□ 1.58
ATP2A3-201ENST00000309890 ZNF326Q5BKZ1 582 aaKnown RBP24.9■■□□□ 1.58
ATP2A3-201ENST00000309890 SLC4A1APQ9BWU0 796 aaKnown RBP24.81■■□□□ 1.56
ATP2A3-201ENST00000309890 FKBP8Q14318 412 aa24.8■■□□□ 1.56
ATP2A3-201ENST00000309890 TONSLQ96HA7 1378 aa24.79■■□□□ 1.56
ATP2A3-201ENST00000309890 EEA1Q15075 1411 aa24.79■■□□□ 1.56
ATP2A3-201ENST00000309890 MIER1Q8N108 512 aa24.78■■□□□ 1.56
ATP2A3-201ENST00000309890 DDX10Q13206 875 aaKnown RBP24.76■■□□□ 1.55
ATP2A3-201ENST00000309890 CLIP1P30622 1438 aa24.76■■□□□ 1.55
ATP2A3-201ENST00000309890 CEP162Q5TB80 1403 aa24.73■■□□□ 1.55
ATP2A3-201ENST00000309890 HNRNPUQ00839 825 aaKnown RBP eCLIP24.65■■□□□ 1.54
ATP2A3-201ENST00000309890 GOLGA3Q08378 1498 aa24.65■■□□□ 1.54
ATP2A3-201ENST00000309890 ANP32AP39687 249 aaKnown RBP24.63■■□□□ 1.53
ATP2A3-201ENST00000309890 TNIKQ9UKE5 1360 aa24.59■■□□□ 1.53
ATP2A3-201ENST00000309890 ARID3CA6NKF2 412 aa24.59■■□□□ 1.53
ATP2A3-201ENST00000309890 FBLN2P98095 1184 aa24.55■■□□□ 1.52
ATP2A3-201ENST00000309890 RB1CC1Q8TDY2 1594 aa24.53■■□□□ 1.52
ATP2A3-201ENST00000309890 ZNF777Q9ULD5 760 aaPredicted RBP24.48■■□□□ 1.51
ATP2A3-201ENST00000309890 WRNQ14191 1432 aaPredicted RBP eCLIP24.48■■□□□ 1.51
ATP2A3-201ENST00000309890 FAM9BQ8IZU0 186 aa24.46■■□□□ 1.51
ATP2A3-201ENST00000309890 NACADO15069 1562 aa24.43■■□□□ 1.5
ATP2A3-201ENST00000309890 CEP164Q9UPV0 1460 aa24.41■■□□□ 1.5
ATP2A3-201ENST00000309890 CANXP27824 592 aaKnown RBP24.41■■□□□ 1.5
ATP2A3-201ENST00000309890 MTUS2Q5JR59 1369 aa24.39■■□□□ 1.5
ATP2A3-201ENST00000309890 CHIC2Q9UKJ5 165 aa24.36■■□□□ 1.49
ATP2A3-201ENST00000309890 NPM2Q86SE8 214 aaKnown RBP24.35■■□□□ 1.49
ATP2A3-201ENST00000309890 MRS2Q9HD23 443 aa24.33■■□□□ 1.49
ATP2A3-201ENST00000309890 HIRIP3Q9BW71 556 aaPredicted RBP24.3■■□□□ 1.48
ATP2A3-201ENST00000309890 CCDC136Q96JN2 1154 aa24.3■■□□□ 1.48
ATP2A3-201ENST00000309890 ZBTB47Q9UFB7 747 aaPredicted RBP24.29■■□□□ 1.48
ATP2A3-201ENST00000309890 BAZ1AQ9NRL2 1556 aaPredicted RBP24.29■■□□□ 1.48
ATP2A3-201ENST00000309890 TMC1Q8TDI8 760 aa24.28■■□□□ 1.48
ATP2A3-201ENST00000309890 EIF4G2P78344 907 aaKnown RBP eCLIP24.26■■□□□ 1.471e-9■■■■■ 47.3
ATP2A3-201ENST00000309890 CECR2Q9BXF3 1484 aa24.26■■□□□ 1.47
ATP2A3-201ENST00000309890 KIF27Q86VH2 1401 aa24.2■■□□□ 1.47
ATP2A3-201ENST00000309890 NEFMP07197 916 aa24.18■■□□□ 1.46
ATP2A3-201ENST00000309890 IRX6P78412 446 aaPredicted RBP24.16■■□□□ 1.46
ATP2A3-201ENST00000309890 BAZ1BQ9UIG0 1483 aaKnown RBP24.16■■□□□ 1.46
ATP2A3-201ENST00000309890 SALL2Q9Y467 1007 aaPredicted RBP24.13■■□□□ 1.45
ATP2A3-201ENST00000309890 SOGA1O94964 1423 aa24.13■■□□□ 1.45
ATP2A3-201ENST00000309890 RRP7BPQ9NSQ0 103 aa24.12■■□□□ 1.45
ATP2A3-201ENST00000309890 TSPY4P0CV99 314 aa24.09■■□□□ 1.45
ATP2A3-201ENST00000309890 TSPY10P0CW01 314 aa24.09■■□□□ 1.45
ATP2A3-201ENST00000309890 CCNB3Q8WWL7 1395 aa24.05■■□□□ 1.44
ATP2A3-201ENST00000309890 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms