RNA–Protein interactions for RNA: ENST00000641738.1

AC116562.4-202, humanhuman

BASIC

Gene AC116562.4, Length 218 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC116562.4-202ENST00000641738 NISCHQ9Y2I1 1504 aa46.07■■■■■ 4.97
AC116562.4-202ENST00000641738 CCDC180Q9P1Z9 1646 aa40.97■■■■■ 4.15
AC116562.4-202ENST00000641738 ABCC9O60706 1549 aa40.26■■■■■ 4.04
AC116562.4-202ENST00000641738 RB1CC1Q8TDY2 1594 aa38.7■■■■□ 3.79
AC116562.4-202ENST00000641738 DCAF8L2P0C7V8 631 aa38.67■■■■□ 3.78
AC116562.4-202ENST00000641738 NACADO15069 1562 aa38.62■■■■□ 3.77
AC116562.4-202ENST00000641738 MYO15BQ96JP2 1530 aa38.36■■■■□ 3.73
AC116562.4-202ENST00000641738 ZCCHC6Q5VYS8 1495 aaKnown RBP38.33■■■■□ 3.73
AC116562.4-202ENST00000641738 DCAF1Q9Y4B6 1507 aa38.12■■■■□ 3.69
AC116562.4-202ENST00000641738 PABPN1Q86U42 306 aaKnown RBP eCLIP37.64■■■■□ 3.62
AC116562.4-202ENST00000641738 UNC13AQ9UPW8 1703 aa37.62■■■■□ 3.61
AC116562.4-202ENST00000641738 BICRAQ9NZM4 1560 aa37.42■■■■□ 3.58
AC116562.4-202ENST00000641738 SCRIBQ14160 1630 aa37.37■■■■□ 3.57
AC116562.4-202ENST00000641738 SHROOM4Q9ULL8 1493 aa37.15■■■■□ 3.54
AC116562.4-202ENST00000641738 DNAJC5BQ9UF47 199 aa37.05■■■■□ 3.52
AC116562.4-202ENST00000641738 EIF4G1Q04637 1599 aaKnown RBP36.5■■■■□ 3.43
AC116562.4-202ENST00000641738 CC2D2AQ9P2K1 1620 aa36.37■■■■□ 3.41
AC116562.4-202ENST00000641738 CECR2Q9BXF3 1484 aa36.22■■■■□ 3.39
AC116562.4-202ENST00000641738 BAZ1AQ9NRL2 1556 aaPredicted RBP35.74■■■■□ 3.31
AC116562.4-202ENST00000641738 SMARCA4P51532 1647 aa35.74■■■■□ 3.31
AC116562.4-202ENST00000641738 NCAPD3P42695 1498 aa35.65■■■■□ 3.3
AC116562.4-202ENST00000641738 ATAD2BQ9ULI0 1458 aa35.62■■■■□ 3.29
AC116562.4-202ENST00000641738 SMARCA2P51531 1590 aa35.59■■■■□ 3.29
AC116562.4-202ENST00000641738 MROH2BQ7Z745 1585 aa35.47■■■■□ 3.27
AC116562.4-202ENST00000641738 HMGXB3Q12766 1538 aa35.43■■■■□ 3.26
AC116562.4-202ENST00000641738 PEG3Q9GZU2 1588 aa35.4■■■■□ 3.26
AC116562.4-202ENST00000641738 BAZ1BQ9UIG0 1483 aaKnown RBP35.35■■■■□ 3.25
AC116562.4-202ENST00000641738 RSF1Q96T23 1441 aaPredicted RBP35.06■■■■□ 3.2
AC116562.4-202ENST00000641738 WIZO95785 1651 aa35.05■■■■□ 3.2
AC116562.4-202ENST00000641738 ERCC6Q03468 1493 aa34.78■■■■□ 3.16
AC116562.4-202ENST00000641738 NESP48681 1621 aa34.76■■■■□ 3.15
AC116562.4-202ENST00000641738 TOP2AP11388 1531 aaKnown RBP34.72■■■■□ 3.15
AC116562.4-202ENST00000641738 LAMC3Q9Y6N6 1575 aa34.7■■■■□ 3.15
AC116562.4-202ENST00000641738 CADPSQ9ULU8 1353 aa34.63■■■■□ 3.13
AC116562.4-202ENST00000641738 PDS5BQ9NTI5 1447 aa34.55■■■■□ 3.12
AC116562.4-202ENST00000641738 CUX2O14529 1486 aa34.44■■■■□ 3.1
AC116562.4-202ENST00000641738 CFTRP13569 1480 aa34.36■■■■□ 3.09
AC116562.4-202ENST00000641738 CCDC88BA6NC98 1476 aa34.33■■■■□ 3.09
AC116562.4-202ENST00000641738 KIF21AQ7Z4S6 1674 aa34.28■■■■□ 3.08
AC116562.4-202ENST00000641738 THOC2Q8NI27 1593 aaKnown RBP34.23■■■■□ 3.07
AC116562.4-202ENST00000641738 FANCD2Q9BXW9 1451 aa34.2■■■■□ 3.07
AC116562.4-202ENST00000641738 CEP164Q9UPV0 1460 aa34.18■■■■□ 3.06
AC116562.4-202ENST00000641738 MRC2Q9UBG0 1479 aa34.15■■■■□ 3.06
AC116562.4-202ENST00000641738 SUPT5HO00267 1087 aaKnown RBP34.14■■■■□ 3.06
AC116562.4-202ENST00000641738 WDR62O43379 1518 aa34■■■■□ 3.03
AC116562.4-202ENST00000641738 PRDM2Q13029 1718 aa33.96■■■■□ 3.03
AC116562.4-202ENST00000641738 URB2Q14146 1524 aaKnown RBP33.82■■■■□ 3
AC116562.4-202ENST00000641738 ABCC8Q09428 1581 aa33.69■■■□□ 2.98
AC116562.4-202ENST00000641738 TOPBP1Q92547 1522 aa33.62■■■□□ 2.97
AC116562.4-202ENST00000641738 DNAJC5Q9H3Z4 198 aa33.57■■■□□ 2.96
AC116562.4-202ENST00000641738 DNMBPQ6XZF7 1577 aa33.56■■■□□ 2.96
AC116562.4-202ENST00000641738 IFT140Q96RY7 1462 aa33.48■■■□□ 2.95
AC116562.4-202ENST00000641738 POLA1P09884 1462 aaPredicted RBP33.32■■■□□ 2.92
AC116562.4-202ENST00000641738 CUX1P39880 1505 aa33.28■■■□□ 2.92
AC116562.4-202ENST00000641738 ZNF608Q9ULD9 1512 aaPredicted RBP33.27■■■□□ 2.92
AC116562.4-202ENST00000641738 SOGA1O94964 1423 aa33.24■■■□□ 2.91
AC116562.4-202ENST00000641738 FGD5Q6ZNL6 1462 aa33.23■■■□□ 2.91
AC116562.4-202ENST00000641738 TARBP1Q13395 1621 aaKnown RBP33.2■■■□□ 2.91
AC116562.4-202ENST00000641738 RAD54L2Q9Y4B4 1467 aa33.17■■■□□ 2.9
AC116562.4-202ENST00000641738 EIF4G3O43432 1585 aaKnown RBP33.11■■■□□ 2.89
AC116562.4-202ENST00000641738 AQRO60306 1485 aaKnown RBP eCLIP33.11■■■□□ 2.89
AC116562.4-202ENST00000641738 WRNQ14191 1432 aaPredicted RBP eCLIP33.1■■■□□ 2.89
AC116562.4-202ENST00000641738 OSCARQ8IYS5 282 aa33.06■■■□□ 2.88
AC116562.4-202ENST00000641738 TDRD9Q8NDG6 1382 aaKnown RBP33.05■■■□□ 2.88
AC116562.4-202ENST00000641738 WDR97A6NE52 1622 aa33.01■■■□□ 2.87
AC116562.4-202ENST00000641738 TOP2BQ02880 1626 aa32.97■■■□□ 2.87
AC116562.4-202ENST00000641738 BIVM-ERCC5R4GMW8 1640 aa32.94■■■□□ 2.86
AC116562.4-202ENST00000641738 SYNJ1O43426 1573 aa32.92■■■□□ 2.86
AC116562.4-202ENST00000641738 ABCA10Q8WWZ4 1543 aa32.91■■■□□ 2.86
AC116562.4-202ENST00000641738 GRIN2BQ13224 1484 aa32.86■■■□□ 2.85
AC116562.4-202ENST00000641738 GAPVD1Q14C86 1478 aa32.83■■■□□ 2.85
AC116562.4-202ENST00000641738 FBLN2P98095 1184 aa32.83■■■□□ 2.85
AC116562.4-202ENST00000641738 SNAPC4Q5SXM2 1469 aa32.79■■■□□ 2.84
AC116562.4-202ENST00000641738 MAGI1Q96QZ7 1491 aaPredicted RBP32.78■■■□□ 2.84
AC116562.4-202ENST00000641738 CHMP7Q8WUX9 453 aaPredicted RBP32.73■■■□□ 2.83
AC116562.4-202ENST00000641738 ABCA5Q8WWZ7 1642 aa32.73■■■□□ 2.83
AC116562.4-202ENST00000641738 CHD1O14646 1710 aa32.68■■■□□ 2.82
AC116562.4-202ENST00000641738 PBRM1Q86U86 1689 aa32.66■■■□□ 2.82
AC116562.4-202ENST00000641738 SYNJ2O15056 1496 aa32.65■■■□□ 2.82
AC116562.4-202ENST00000641738 ERICH3Q5RHP9 1530 aa32.52■■■□□ 2.8
AC116562.4-202ENST00000641738 FHAD1B1AJZ9 1412 aa32.47■■■□□ 2.79
AC116562.4-202ENST00000641738 KIF27Q86VH2 1401 aa32.45■■■□□ 2.79
AC116562.4-202ENST00000641738 ADAMTS12P58397 1594 aa32.44■■■□□ 2.78
AC116562.4-202ENST00000641738 TRIM41Q8WV44 630 aa32.42■■■□□ 2.78
AC116562.4-202ENST00000641738 GRIN2AQ12879 1464 aa32.41■■■□□ 2.78
AC116562.4-202ENST00000641738 ARHGEF11O15085 1522 aa32.41■■■□□ 2.78
AC116562.4-202ENST00000641738 RIMBP3CA6NJZ7 1639 aa32.39■■■□□ 2.78
AC116562.4-202ENST00000641738 RIMBP3BA6NNM3 1639 aa32.39■■■□□ 2.78
AC116562.4-202ENST00000641738 RIMBP3Q9UFD9 1639 aa32.39■■■□□ 2.78
AC116562.4-202ENST00000641738 CLASP1Q7Z460 1538 aa32.37■■■□□ 2.77
AC116562.4-202ENST00000641738 IGF1RP08069 1367 aa32.31■■■□□ 2.76
AC116562.4-202ENST00000641738 NUP160Q12769 1436 aa32.26■■■□□ 2.76
AC116562.4-202ENST00000641738 CYB5RLQ6IPT4 315 aa32.2■■■□□ 2.75
AC116562.4-202ENST00000641738 CEP170Q5SW79 1584 aa32.19■■■□□ 2.74
AC116562.4-202ENST00000641738 CUL7Q14999 1698 aa32.18■■■□□ 2.74
AC116562.4-202ENST00000641738 CARMIL1Q5VZK9 1371 aa32.13■■■□□ 2.73
AC116562.4-202ENST00000641738 ARAP1Q96P48 1450 aa32.13■■■□□ 2.73
AC116562.4-202ENST00000641738 JPH4Q96JJ6 628 aa32.01■■■□□ 2.71
AC116562.4-202ENST00000641738 RUSC2Q8N2Y8 1516 aa31.99■■■□□ 2.71
AC116562.4-202ENST00000641738 SHROOM2Q13796 1616 aa31.97■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms