RNA–Protein interactions for RNA: ENST00000433030.3

CT47A1-201, Transcript of cancer/testis antigen family 47, member A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CT47A1, Length 1,288 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CT47A1-201ENST00000433030 NISCHQ9Y2I1 1504 aa46.03■■■■■ 4.96
CT47A1-201ENST00000433030 CCDC180Q9P1Z9 1646 aa40.94■■■■■ 4.14
CT47A1-201ENST00000433030 ABCC9O60706 1549 aa39.81■■■■□ 3.96
CT47A1-201ENST00000433030 ZCCHC6Q5VYS8 1495 aaKnown RBP38.43■■■■□ 3.74
CT47A1-201ENST00000433030 RB1CC1Q8TDY2 1594 aa38.41■■■■□ 3.74
CT47A1-201ENST00000433030 NACADO15069 1562 aa38.4■■■■□ 3.74
CT47A1-201ENST00000433030 MYO15BQ96JP2 1530 aa38.24■■■■□ 3.71
CT47A1-201ENST00000433030 DCAF8L2P0C7V8 631 aa38.22■■■■□ 3.71
CT47A1-201ENST00000433030 DCAF1Q9Y4B6 1507 aa38.14■■■■□ 3.7
CT47A1-201ENST00000433030 UNC13AQ9UPW8 1703 aa37.56■■■■□ 3.6
CT47A1-201ENST00000433030 SCRIBQ14160 1630 aa37.32■■■■□ 3.57
CT47A1-201ENST00000433030 BICRAQ9NZM4 1560 aa37.24■■■■□ 3.55
CT47A1-201ENST00000433030 PABPN1Q86U42 306 aaKnown RBP eCLIP37.14■■■■□ 3.54
CT47A1-201ENST00000433030 SHROOM4Q9ULL8 1493 aa36.92■■■■□ 3.5
CT47A1-201ENST00000433030 DNAJC5BQ9UF47 199 aa36.29■■■■□ 3.4
CT47A1-201ENST00000433030 EIF4G1Q04637 1599 aaKnown RBP36.25■■■■□ 3.39
CT47A1-201ENST00000433030 CC2D2AQ9P2K1 1620 aa36.05■■■■□ 3.36
CT47A1-201ENST00000433030 CECR2Q9BXF3 1484 aa35.81■■■■□ 3.32
CT47A1-201ENST00000433030 SMARCA4P51532 1647 aa35.72■■■■□ 3.31
CT47A1-201ENST00000433030 BAZ1AQ9NRL2 1556 aaPredicted RBP35.7■■■■□ 3.31
CT47A1-201ENST00000433030 MROH2BQ7Z745 1585 aa35.47■■■■□ 3.27
CT47A1-201ENST00000433030 ATAD2BQ9ULI0 1458 aa35.45■■■■□ 3.27
CT47A1-201ENST00000433030 SMARCA2P51531 1590 aa35.44■■■■□ 3.26
CT47A1-201ENST00000433030 NCAPD3P42695 1498 aa35.4■■■■□ 3.26
CT47A1-201ENST00000433030 PEG3Q9GZU2 1588 aa35.39■■■■□ 3.26
CT47A1-201ENST00000433030 HMGXB3Q12766 1538 aa35.31■■■■□ 3.24
CT47A1-201ENST00000433030 BAZ1BQ9UIG0 1483 aaKnown RBP35.18■■■■□ 3.22
CT47A1-201ENST00000433030 WIZO95785 1651 aa35.11■■■■□ 3.21
CT47A1-201ENST00000433030 RSF1Q96T23 1441 aaPredicted RBP35.1■■■■□ 3.21
CT47A1-201ENST00000433030 TOP2AP11388 1531 aaKnown RBP34.79■■■■□ 3.16
CT47A1-201ENST00000433030 NESP48681 1621 aa34.49■■■■□ 3.11
CT47A1-201ENST00000433030 LAMC3Q9Y6N6 1575 aa34.48■■■■□ 3.11
CT47A1-201ENST00000433030 CADPSQ9ULU8 1353 aa34.35■■■■□ 3.09
CT47A1-201ENST00000433030 CCDC88BA6NC98 1476 aa34.31■■■■□ 3.08
CT47A1-201ENST00000433030 ERCC6Q03468 1493 aa34.31■■■■□ 3.08
CT47A1-201ENST00000433030 SUPT5HO00267 1087 aaKnown RBP34.23■■■■□ 3.07
CT47A1-201ENST00000433030 CFTRP13569 1480 aa34.21■■■■□ 3.07
CT47A1-201ENST00000433030 PDS5BQ9NTI5 1447 aa34.2■■■■□ 3.06
CT47A1-201ENST00000433030 KIF21AQ7Z4S6 1674 aa34.15■■■■□ 3.06
CT47A1-201ENST00000433030 PRDM2Q13029 1718 aa34.07■■■■□ 3.04
CT47A1-201ENST00000433030 THOC2Q8NI27 1593 aaKnown RBP34.02■■■■□ 3.04
CT47A1-201ENST00000433030 FANCD2Q9BXW9 1451 aa33.99■■■■□ 3.03
CT47A1-201ENST00000433030 CEP164Q9UPV0 1460 aa33.95■■■■□ 3.03
CT47A1-201ENST00000433030 CUX2O14529 1486 aa33.92■■■■□ 3.02
CT47A1-201ENST00000433030 MRC2Q9UBG0 1479 aa33.88■■■■□ 3.01
CT47A1-201ENST00000433030 WDR62O43379 1518 aa33.79■■■■□ 3
CT47A1-201ENST00000433030 URB2Q14146 1524 aaKnown RBP33.65■■■□□ 2.98
CT47A1-201ENST00000433030 DNMBPQ6XZF7 1577 aa33.48■■■□□ 2.95
CT47A1-201ENST00000433030 TOPBP1Q92547 1522 aa33.48■■■□□ 2.95
CT47A1-201ENST00000433030 ABCC8Q09428 1581 aa33.47■■■□□ 2.95
CT47A1-201ENST00000433030 CUX1P39880 1505 aa33.28■■■□□ 2.92
CT47A1-201ENST00000433030 IFT140Q96RY7 1462 aa33.23■■■□□ 2.91
CT47A1-201ENST00000433030 POLA1P09884 1462 aaPredicted RBP33.21■■■□□ 2.91
CT47A1-201ENST00000433030 FGD5Q6ZNL6 1462 aa33.15■■■□□ 2.9
CT47A1-201ENST00000433030 TARBP1Q13395 1621 aaKnown RBP33.12■■■□□ 2.89
CT47A1-201ENST00000433030 WRNQ14191 1432 aaPredicted RBP eCLIP33.11■■■□□ 2.89
CT47A1-201ENST00000433030 BIVM-ERCC5R4GMW8 1640 aa33.08■■■□□ 2.89
CT47A1-201ENST00000433030 TOP2BQ02880 1626 aa33.06■■■□□ 2.88
CT47A1-201ENST00000433030 SYNJ1O43426 1573 aa33.06■■■□□ 2.88
CT47A1-201ENST00000433030 ZNF608Q9ULD9 1512 aaPredicted RBP33.04■■■□□ 2.88
CT47A1-201ENST00000433030 RAD54L2Q9Y4B4 1467 aa33.02■■■□□ 2.88
CT47A1-201ENST00000433030 SOGA1O94964 1423 aa33.01■■■□□ 2.87
CT47A1-201ENST00000433030 EIF4G3O43432 1585 aaKnown RBP33■■■□□ 2.87
CT47A1-201ENST00000433030 WDR97A6NE52 1622 aa32.94■■■□□ 2.86
CT47A1-201ENST00000433030 ABCA10Q8WWZ4 1543 aa32.84■■■□□ 2.85
CT47A1-201ENST00000433030 AQRO60306 1485 aaKnown RBP eCLIP32.84■■■□□ 2.85
CT47A1-201ENST00000433030 TDRD9Q8NDG6 1382 aaKnown RBP32.8■■■□□ 2.84
CT47A1-201ENST00000433030 ABCA5Q8WWZ7 1642 aa32.74■■■□□ 2.83
CT47A1-201ENST00000433030 DNAJC5Q9H3Z4 198 aa32.72■■■□□ 2.83
CT47A1-201ENST00000433030 GAPVD1Q14C86 1478 aa32.67■■■□□ 2.82
CT47A1-201ENST00000433030 PBRM1Q86U86 1689 aa32.66■■■□□ 2.82
CT47A1-201ENST00000433030 GRIN2BQ13224 1484 aa32.66■■■□□ 2.82
CT47A1-201ENST00000433030 SNAPC4Q5SXM2 1469 aa32.61■■■□□ 2.81
CT47A1-201ENST00000433030 MAGI1Q96QZ7 1491 aaPredicted RBP32.57■■■□□ 2.8
CT47A1-201ENST00000433030 CHD1O14646 1710 aa32.53■■■□□ 2.8
CT47A1-201ENST00000433030 ERICH3Q5RHP9 1530 aa32.46■■■□□ 2.79
CT47A1-201ENST00000433030 SYNJ2O15056 1496 aa32.43■■■□□ 2.78
CT47A1-201ENST00000433030 ADAMTS12P58397 1594 aa32.43■■■□□ 2.78
CT47A1-201ENST00000433030 OSCARQ8IYS5 282 aa32.41■■■□□ 2.78
CT47A1-201ENST00000433030 KIF27Q86VH2 1401 aa32.4■■■□□ 2.78
CT47A1-201ENST00000433030 FBLN2P98095 1184 aa32.36■■■□□ 2.77
CT47A1-201ENST00000433030 TRIM41Q8WV44 630 aa32.34■■■□□ 2.77
CT47A1-201ENST00000433030 CHMP7Q8WUX9 453 aaPredicted RBP32.31■■■□□ 2.76
CT47A1-201ENST00000433030 FHAD1B1AJZ9 1412 aa32.3■■■□□ 2.76
CT47A1-201ENST00000433030 GRIN2AQ12879 1464 aa32.25■■■□□ 2.75
CT47A1-201ENST00000433030 CUL7Q14999 1698 aa32.23■■■□□ 2.75
CT47A1-201ENST00000433030 IGF1RP08069 1367 aa32.19■■■□□ 2.74
CT47A1-201ENST00000433030 CLASP1Q7Z460 1538 aa32.19■■■□□ 2.74
CT47A1-201ENST00000433030 RUSC2Q8N2Y8 1516 aa32.12■■■□□ 2.73
CT47A1-201ENST00000433030 CEP170Q5SW79 1584 aa32.1■■■□□ 2.73
CT47A1-201ENST00000433030 NUP160Q12769 1436 aa32.09■■■□□ 2.73
CT47A1-201ENST00000433030 CHIC1Q5VXU3 224 aa32.06■■■□□ 2.72
CT47A1-201ENST00000433030 CARMIL1Q5VZK9 1371 aa32.02■■■□□ 2.72
CT47A1-201ENST00000433030 ARHGEF11O15085 1522 aa32.01■■■□□ 2.72
CT47A1-201ENST00000433030 RIMBP3CA6NJZ7 1639 aa32■■■□□ 2.71
CT47A1-201ENST00000433030 RIMBP3BA6NNM3 1639 aa32■■■□□ 2.71
CT47A1-201ENST00000433030 RIMBP3Q9UFD9 1639 aa32■■■□□ 2.71
CT47A1-201ENST00000433030 EEA1Q15075 1411 aa31.91■■■□□ 2.7
CT47A1-201ENST00000433030 RAPGEF2Q9Y4G8 1499 aa31.89■■■□□ 2.7
CT47A1-201ENST00000433030 SHROOM2Q13796 1616 aa31.88■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms