Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH20Q9HBT6 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDH20Q9HBT6 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH20Q9HBT6 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDH20Q9HBT6 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH20Q9HBT6 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDH20Q9HBT6 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDH20Q9HBT6 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CDH20Q9HBT6 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CDH20Q9HBT6 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
CDH20Q9HBT6 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH20Q9HBT6 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CDH20Q9HBT6 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CDH20Q9HBT6 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH20Q9HBT6 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH20Q9HBT6 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDH20Q9HBT6 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH20Q9HBT6 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH20Q9HBT6 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH20Q9HBT6 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
CDH20Q9HBT6 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDH20Q9HBT6 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CDH20Q9HBT6 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH20Q9HBT6 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.46■□□□□ 0.23
CDH20Q9HBT6 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH20Q9HBT6 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.46■□□□□ 0.23
CDH20Q9HBT6 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH20Q9HBT6 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDH20Q9HBT6 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH20Q9HBT6 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.46■□□□□ 0.23
CDH20Q9HBT6 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.46■□□□□ 0.23
CDH20Q9HBT6 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDH20Q9HBT6 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH20Q9HBT6 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CDH20Q9HBT6 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.46■□□□□ 0.23
CDH20Q9HBT6 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.46■□□□□ 0.23
CDH20Q9HBT6 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDH20Q9HBT6 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH20Q9HBT6 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH20Q9HBT6 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.46■□□□□ 0.22
CDH20Q9HBT6 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.46■□□□□ 0.22
CDH20Q9HBT6 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH20Q9HBT6 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CDH20Q9HBT6 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC16.45■□□□□ 0.22
CDH20Q9HBT6 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDH20Q9HBT6 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.45■□□□□ 0.22
CDH20Q9HBT6 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CDH20Q9HBT6 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDH20Q9HBT6 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.45■□□□□ 0.22
CDH20Q9HBT6 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.45■□□□□ 0.22
CDH20Q9HBT6 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDH20Q9HBT6 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.45■□□□□ 0.22
CDH20Q9HBT6 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH20Q9HBT6 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.45■□□□□ 0.22
CDH20Q9HBT6 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.45■□□□□ 0.22
CDH20Q9HBT6 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.45■□□□□ 0.22
CDH20Q9HBT6 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.45■□□□□ 0.22
CDH20Q9HBT6 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDH20Q9HBT6 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH20Q9HBT6 NAPSB-206ENST00000562112 1266 ntBASIC16.45■□□□□ 0.22
CDH20Q9HBT6 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.45■□□□□ 0.22
CDH20Q9HBT6 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.45■□□□□ 0.22
CDH20Q9HBT6 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.45■□□□□ 0.22
CDH20Q9HBT6 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDH20Q9HBT6 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDH20Q9HBT6 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CDH20Q9HBT6 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH20Q9HBT6 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
CDH20Q9HBT6 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CDH20Q9HBT6 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH20Q9HBT6 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH20Q9HBT6 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.45■□□□□ 0.22
CDH20Q9HBT6 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.45■□□□□ 0.22
CDH20Q9HBT6 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CDH20Q9HBT6 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH20Q9HBT6 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH20Q9HBT6 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH20Q9HBT6 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH20Q9HBT6 OR6D1P-202ENST00000641007 5290 ntBASIC16.44■□□□□ 0.22
CDH20Q9HBT6 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CDH20Q9HBT6 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDH20Q9HBT6 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH20Q9HBT6 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH20Q9HBT6 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.44■□□□□ 0.22
CDH20Q9HBT6 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDH20Q9HBT6 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.44■□□□□ 0.22
CDH20Q9HBT6 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH20Q9HBT6 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH20Q9HBT6 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDH20Q9HBT6 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CDH20Q9HBT6 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CDH20Q9HBT6 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDH20Q9HBT6 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH20Q9HBT6 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH20Q9HBT6 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.44■□□□□ 0.22
CDH20Q9HBT6 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.44■□□□□ 0.22
CDH20Q9HBT6 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH20Q9HBT6 BX323043.1-201ENST00000641006 1765 ntBASIC16.43■□□□□ 0.22
CDH20Q9HBT6 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH20Q9HBT6 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms