RNA–Protein interactions for RNA: ENST00000394547.7

TRPT1-203, Transcript of tRNA phosphotransferase 1, humanhuman

TSL 1 (best) BASIC

Gene TRPT1, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-203ENST00000394547 NISCHQ9Y2I1 1504 aa46.08■■■■■ 4.97
TRPT1-203ENST00000394547 CCDC180Q9P1Z9 1646 aa41■■■■■ 4.15
TRPT1-203ENST00000394547 ABCC9O60706 1549 aa39.74■■■■□ 3.95
TRPT1-203ENST00000394547 NACADO15069 1562 aa38.45■■■■□ 3.75
TRPT1-203ENST00000394547 ZCCHC6Q5VYS8 1495 aaKnown RBP38.45■■■■□ 3.75
TRPT1-203ENST00000394547 RB1CC1Q8TDY2 1594 aa38.44■■■■□ 3.74
TRPT1-203ENST00000394547 MYO15BQ96JP2 1530 aa38.35■■■■□ 3.73
TRPT1-203ENST00000394547 DCAF1Q9Y4B6 1507 aa38.22■■■■□ 3.71
TRPT1-203ENST00000394547 DCAF8L2P0C7V8 631 aa38.2■■■■□ 3.71
TRPT1-203ENST00000394547 UNC13AQ9UPW8 1703 aa37.57■■■■□ 3.6
TRPT1-203ENST00000394547 SCRIBQ14160 1630 aa37.28■■■■□ 3.56
TRPT1-203ENST00000394547 BICRAQ9NZM4 1560 aa37.23■■■■□ 3.55
TRPT1-203ENST00000394547 PABPN1Q86U42 306 aaKnown RBP eCLIP37.08■■■■□ 3.53
TRPT1-203ENST00000394547 SHROOM4Q9ULL8 1493 aa37.01■■■■□ 3.51
TRPT1-203ENST00000394547 EIF4G1Q04637 1599 aaKnown RBP36.25■■■■□ 3.39
TRPT1-203ENST00000394547 DNAJC5BQ9UF47 199 aa36.22■■■■□ 3.39
TRPT1-203ENST00000394547 CC2D2AQ9P2K1 1620 aa36.04■■■■□ 3.36
TRPT1-203ENST00000394547 CECR2Q9BXF3 1484 aa35.79■■■■□ 3.32
TRPT1-203ENST00000394547 BAZ1AQ9NRL2 1556 aaPredicted RBP35.74■■■■□ 3.31
TRPT1-203ENST00000394547 SMARCA4P51532 1647 aa35.74■■■■□ 3.31
TRPT1-203ENST00000394547 SMARCA2P51531 1590 aa35.49■■■■□ 3.27
TRPT1-203ENST00000394547 MROH2BQ7Z745 1585 aa35.47■■■■□ 3.27
TRPT1-203ENST00000394547 ATAD2BQ9ULI0 1458 aa35.46■■■■□ 3.27
TRPT1-203ENST00000394547 PEG3Q9GZU2 1588 aa35.44■■■■□ 3.26
TRPT1-203ENST00000394547 NCAPD3P42695 1498 aa35.44■■■■□ 3.26
TRPT1-203ENST00000394547 HMGXB3Q12766 1538 aa35.34■■■■□ 3.25
TRPT1-203ENST00000394547 BAZ1BQ9UIG0 1483 aaKnown RBP35.19■■■■□ 3.22
TRPT1-203ENST00000394547 AEBP2Q6ZN18 517 aaPredicted RBP35.13■■■■□ 3.21
TRPT1-203ENST00000394547 RSF1Q96T23 1441 aaPredicted RBP35.12■■■■□ 3.21
TRPT1-203ENST00000394547 WIZO95785 1651 aa35.11■■■■□ 3.21
TRPT1-203ENST00000394547 TOP2AP11388 1531 aaKnown RBP34.81■■■■□ 3.16
TRPT1-203ENST00000394547 LAMC3Q9Y6N6 1575 aa34.53■■■■□ 3.12
TRPT1-203ENST00000394547 NESP48681 1621 aa34.44■■■■□ 3.1
TRPT1-203ENST00000394547 CADPSQ9ULU8 1353 aa34.38■■■■□ 3.09
TRPT1-203ENST00000394547 CCDC88BA6NC98 1476 aa34.32■■■■□ 3.08
TRPT1-203ENST00000394547 ERCC6Q03468 1493 aa34.28■■■■□ 3.08
TRPT1-203ENST00000394547 CFTRP13569 1480 aa34.25■■■■□ 3.07
TRPT1-203ENST00000394547 PDS5BQ9NTI5 1447 aa34.23■■■■□ 3.07
TRPT1-203ENST00000394547 SUPT5HO00267 1087 aaKnown RBP34.22■■■■□ 3.07
TRPT1-203ENST00000394547 KIF21AQ7Z4S6 1674 aa34.13■■■■□ 3.05
TRPT1-203ENST00000394547 PRDM2Q13029 1718 aa34.11■■■■□ 3.05
TRPT1-203ENST00000394547 THOC2Q8NI27 1593 aaKnown RBP34■■■■□ 3.03
TRPT1-203ENST00000394547 FANCD2Q9BXW9 1451 aa33.99■■■■□ 3.03
TRPT1-203ENST00000394547 CEP164Q9UPV0 1460 aa33.96■■■■□ 3.03
TRPT1-203ENST00000394547 CUX2O14529 1486 aa33.95■■■■□ 3.02
TRPT1-203ENST00000394547 CHIC1Q5VXU3 224 aa33.93■■■■□ 3.02
TRPT1-203ENST00000394547 MRC2Q9UBG0 1479 aa33.88■■■■□ 3.01
TRPT1-203ENST00000394547 WDR62O43379 1518 aa33.79■■■■□ 3
TRPT1-203ENST00000394547 URB2Q14146 1524 aaKnown RBP33.63■■■□□ 2.97
TRPT1-203ENST00000394547 ABCC8Q09428 1581 aa33.55■■■□□ 2.96
TRPT1-203ENST00000394547 DNMBPQ6XZF7 1577 aa33.5■■■□□ 2.95
TRPT1-203ENST00000394547 TOPBP1Q92547 1522 aa33.48■■■□□ 2.95
TRPT1-203ENST00000394547 CUX1P39880 1505 aa33.28■■■□□ 2.92
TRPT1-203ENST00000394547 IFT140Q96RY7 1462 aa33.25■■■□□ 2.91
TRPT1-203ENST00000394547 POLA1P09884 1462 aaPredicted RBP33.2■■■□□ 2.91
TRPT1-203ENST00000394547 FGD5Q6ZNL6 1462 aa33.13■■■□□ 2.89
TRPT1-203ENST00000394547 WRNQ14191 1432 aaPredicted RBP eCLIP33.13■■■□□ 2.89
TRPT1-203ENST00000394547 TARBP1Q13395 1621 aaKnown RBP33.13■■■□□ 2.89
TRPT1-203ENST00000394547 BIVM-ERCC5R4GMW8 1640 aa33.12■■■□□ 2.89
TRPT1-203ENST00000394547 TOP2BQ02880 1626 aa33.1■■■□□ 2.89
TRPT1-203ENST00000394547 SYNJ1O43426 1573 aa33.04■■■□□ 2.88
TRPT1-203ENST00000394547 SOGA1O94964 1423 aa33.03■■■□□ 2.88
TRPT1-203ENST00000394547 ZNF608Q9ULD9 1512 aaPredicted RBP33■■■□□ 2.87
TRPT1-203ENST00000394547 WDR97A6NE52 1622 aa32.99■■■□□ 2.87
TRPT1-203ENST00000394547 RAD54L2Q9Y4B4 1467 aa32.99■■■□□ 2.87
TRPT1-203ENST00000394547 EIF4G3O43432 1585 aaKnown RBP32.97■■■□□ 2.87
TRPT1-203ENST00000394547 ABCA10Q8WWZ4 1543 aa32.87■■■□□ 2.85
TRPT1-203ENST00000394547 AQRO60306 1485 aaKnown RBP eCLIP32.83■■■□□ 2.856e-9■■■■■ 37.6
TRPT1-203ENST00000394547 TDRD9Q8NDG6 1382 aaKnown RBP32.77■■■□□ 2.84
TRPT1-203ENST00000394547 ABCA5Q8WWZ7 1642 aa32.75■■■□□ 2.83
TRPT1-203ENST00000394547 GAPVD1Q14C86 1478 aa32.68■■■□□ 2.82
TRPT1-203ENST00000394547 GRIN2BQ13224 1484 aa32.67■■■□□ 2.82
TRPT1-203ENST00000394547 PBRM1Q86U86 1689 aa32.67■■■□□ 2.82
TRPT1-203ENST00000394547 MAGI1Q96QZ7 1491 aaPredicted RBP32.61■■■□□ 2.81
TRPT1-203ENST00000394547 SNAPC4Q5SXM2 1469 aa32.58■■■□□ 2.81
TRPT1-203ENST00000394547 DNAJC5Q9H3Z4 198 aa32.57■■■□□ 2.8
TRPT1-203ENST00000394547 CHD1O14646 1710 aa32.51■■■□□ 2.8
TRPT1-203ENST00000394547 ERICH3Q5RHP9 1530 aa32.51■■■□□ 2.79
TRPT1-203ENST00000394547 OSCARQ8IYS5 282 aa32.46■■■□□ 2.79
TRPT1-203ENST00000394547 SYNJ2O15056 1496 aa32.45■■■□□ 2.79
TRPT1-203ENST00000394547 KIF27Q86VH2 1401 aa32.43■■■□□ 2.78
TRPT1-203ENST00000394547 ADAMTS12P58397 1594 aa32.41■■■□□ 2.78
TRPT1-203ENST00000394547 TRIM41Q8WV44 630 aa32.38■■■□□ 2.77
TRPT1-203ENST00000394547 FBLN2P98095 1184 aa32.33■■■□□ 2.77
TRPT1-203ENST00000394547 CHMP7Q8WUX9 453 aaPredicted RBP32.33■■■□□ 2.77
TRPT1-203ENST00000394547 FHAD1B1AJZ9 1412 aa32.33■■■□□ 2.77
TRPT1-203ENST00000394547 CUL7Q14999 1698 aa32.27■■■□□ 2.76
TRPT1-203ENST00000394547 GRIN2AQ12879 1464 aa32.26■■■□□ 2.75
TRPT1-203ENST00000394547 IGF1RP08069 1367 aa32.22■■■□□ 2.75
TRPT1-203ENST00000394547 CLASP1Q7Z460 1538 aa32.18■■■□□ 2.74
TRPT1-203ENST00000394547 NUP160Q12769 1436 aa32.11■■■□□ 2.73
TRPT1-203ENST00000394547 RUSC2Q8N2Y8 1516 aa32.1■■■□□ 2.73
TRPT1-203ENST00000394547 CEP170Q5SW79 1584 aa32.08■■■□□ 2.73
TRPT1-203ENST00000394547 CARMIL1Q5VZK9 1371 aa32.06■■■□□ 2.72
TRPT1-203ENST00000394547 ARHGEF11O15085 1522 aa31.99■■■□□ 2.71
TRPT1-203ENST00000394547 EEA1Q15075 1411 aa31.99■■■□□ 2.71
TRPT1-203ENST00000394547 RIMBP3CA6NJZ7 1639 aa31.98■■■□□ 2.71
TRPT1-203ENST00000394547 RIMBP3BA6NNM3 1639 aa31.98■■■□□ 2.71
TRPT1-203ENST00000394547 RIMBP3Q9UFD9 1639 aa31.98■■■□□ 2.71
TRPT1-203ENST00000394547 RAPGEF2Q9Y4G8 1499 aa31.93■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms