RNA–Protein interactions for RNA: ENST00000473123.5

ZIC4-209, Transcript of Zic family member 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZIC4, Length 1,481 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-209ENST00000473123 NISCHQ9Y2I1 1504 aa46.06■■■■■ 4.96
ZIC4-209ENST00000473123 CCDC180Q9P1Z9 1646 aa40.91■■■■■ 4.14
ZIC4-209ENST00000473123 ABCC9O60706 1549 aa40.02■■■■■ 4
ZIC4-209ENST00000473123 DCAF8L2P0C7V8 631 aa38.53■■■■□ 3.76
ZIC4-209ENST00000473123 RB1CC1Q8TDY2 1594 aa38.47■■■■□ 3.75
ZIC4-209ENST00000473123 NACADO15069 1562 aa38.42■■■■□ 3.74
ZIC4-209ENST00000473123 ZCCHC6Q5VYS8 1495 aaKnown RBP38.41■■■■□ 3.74
ZIC4-209ENST00000473123 MYO15BQ96JP2 1530 aa38.14■■■■□ 3.7
ZIC4-209ENST00000473123 DCAF1Q9Y4B6 1507 aa38.05■■■■□ 3.68
ZIC4-209ENST00000473123 UNC13AQ9UPW8 1703 aa37.65■■■■□ 3.62
ZIC4-209ENST00000473123 SCRIBQ14160 1630 aa37.44■■■■□ 3.58
ZIC4-209ENST00000473123 PABPN1Q86U42 306 aaKnown RBP eCLIP37.41■■■■□ 3.58
ZIC4-209ENST00000473123 BICRAQ9NZM4 1560 aa37.32■■■■□ 3.56
ZIC4-209ENST00000473123 SHROOM4Q9ULL8 1493 aa36.84■■■■□ 3.49
ZIC4-209ENST00000473123 DNAJC5BQ9UF47 199 aa36.6■■■■□ 3.45
ZIC4-209ENST00000473123 EIF4G1Q04637 1599 aaKnown RBP36.34■■■■□ 3.41
ZIC4-209ENST00000473123 CC2D2AQ9P2K1 1620 aa36.18■■■■□ 3.38
ZIC4-209ENST00000473123 CECR2Q9BXF3 1484 aa35.92■■■■□ 3.34
ZIC4-209ENST00000473123 SMARCA4P51532 1647 aa35.76■■■■□ 3.31
ZIC4-209ENST00000473123 BAZ1AQ9NRL2 1556 aaPredicted RBP35.7■■■■□ 3.31
ZIC4-209ENST00000473123 MROH2BQ7Z745 1585 aa35.54■■■■□ 3.28
ZIC4-209ENST00000473123 ATAD2BQ9ULI0 1458 aa35.51■■■■□ 3.27
ZIC4-209ENST00000473123 SMARCA2P51531 1590 aa35.46■■■■□ 3.27
ZIC4-209ENST00000473123 NCAPD3P42695 1498 aa35.42■■■■□ 3.26
ZIC4-209ENST00000473123 PEG3Q9GZU2 1588 aa35.34■■■■□ 3.25
ZIC4-209ENST00000473123 HMGXB3Q12766 1538 aa35.3■■■■□ 3.24
ZIC4-209ENST00000473123 BAZ1BQ9UIG0 1483 aaKnown RBP35.25■■■■□ 3.23
ZIC4-209ENST00000473123 WIZO95785 1651 aa35.19■■■■□ 3.22
ZIC4-209ENST00000473123 RSF1Q96T23 1441 aaPredicted RBP35.14■■■■□ 3.22
ZIC4-209ENST00000473123 TOP2AP11388 1531 aaKnown RBP34.78■■■■□ 3.16
ZIC4-209ENST00000473123 NESP48681 1621 aa34.66■■■■□ 3.14
ZIC4-209ENST00000473123 LAMC3Q9Y6N6 1575 aa34.52■■■■□ 3.12
ZIC4-209ENST00000473123 ERCC6Q03468 1493 aa34.48■■■■□ 3.11
ZIC4-209ENST00000473123 CADPSQ9ULU8 1353 aa34.42■■■■□ 3.1
ZIC4-209ENST00000473123 SUPT5HO00267 1087 aaKnown RBP34.39■■■■□ 3.1
ZIC4-209ENST00000473123 CCDC88BA6NC98 1476 aa34.36■■■■□ 3.09
ZIC4-209ENST00000473123 PDS5BQ9NTI5 1447 aa34.27■■■■□ 3.08
ZIC4-209ENST00000473123 KIF21AQ7Z4S6 1674 aa34.27■■■■□ 3.08
ZIC4-209ENST00000473123 CFTRP13569 1480 aa34.24■■■■□ 3.07
ZIC4-209ENST00000473123 THOC2Q8NI27 1593 aaKnown RBP34.1■■■■□ 3.05
ZIC4-209ENST00000473123 FANCD2Q9BXW9 1451 aa34.08■■■■□ 3.05
ZIC4-209ENST00000473123 CEP164Q9UPV0 1460 aa34.03■■■■□ 3.04
ZIC4-209ENST00000473123 PRDM2Q13029 1718 aa34.03■■■■□ 3.04
ZIC4-209ENST00000473123 CUX2O14529 1486 aa34.01■■■■□ 3.03
ZIC4-209ENST00000473123 MRC2Q9UBG0 1479 aa33.95■■■■□ 3.03
ZIC4-209ENST00000473123 WDR62O43379 1518 aa33.84■■■■□ 3.01
ZIC4-209ENST00000473123 URB2Q14146 1524 aaKnown RBP33.74■■■□□ 2.99
ZIC4-209ENST00000473123 TOPBP1Q92547 1522 aa33.54■■■□□ 2.96
ZIC4-209ENST00000473123 DNMBPQ6XZF7 1577 aa33.51■■■□□ 2.96
ZIC4-209ENST00000473123 ABCC8Q09428 1581 aa33.46■■■□□ 2.95
ZIC4-209ENST00000473123 CUX1P39880 1505 aa33.34■■■□□ 2.93
ZIC4-209ENST00000473123 IFT140Q96RY7 1462 aa33.28■■■□□ 2.92
ZIC4-209ENST00000473123 POLA1P09884 1462 aaPredicted RBP33.27■■■□□ 2.92
ZIC4-209ENST00000473123 FGD5Q6ZNL6 1462 aa33.22■■■□□ 2.91
ZIC4-209ENST00000473123 ZNF608Q9ULD9 1512 aaPredicted RBP33.18■■■□□ 2.9
ZIC4-209ENST00000473123 TARBP1Q13395 1621 aaKnown RBP33.17■■■□□ 2.9
ZIC4-209ENST00000473123 RAD54L2Q9Y4B4 1467 aa33.15■■■□□ 2.9
ZIC4-209ENST00000473123 WRNQ14191 1432 aaPredicted RBP eCLIP33.14■■■□□ 2.9
ZIC4-209ENST00000473123 SOGA1O94964 1423 aa33.11■■■□□ 2.89
ZIC4-209ENST00000473123 SYNJ1O43426 1573 aa33.11■■■□□ 2.89
ZIC4-209ENST00000473123 EIF4G3O43432 1585 aaKnown RBP33.07■■■□□ 2.88
ZIC4-209ENST00000473123 TOP2BQ02880 1626 aa33.06■■■□□ 2.88
ZIC4-209ENST00000473123 BIVM-ERCC5R4GMW8 1640 aa33.06■■■□□ 2.88
ZIC4-209ENST00000473123 AQRO60306 1485 aaKnown RBP eCLIP32.99■■■□□ 2.87
ZIC4-209ENST00000473123 TDRD9Q8NDG6 1382 aaKnown RBP32.95■■■□□ 2.87
ZIC4-209ENST00000473123 WDR97A6NE52 1622 aa32.94■■■□□ 2.86
ZIC4-209ENST00000473123 ABCA10Q8WWZ4 1543 aa32.85■■■□□ 2.85
ZIC4-209ENST00000473123 DNAJC5Q9H3Z4 198 aa32.83■■■□□ 2.85
ZIC4-209ENST00000473123 ABCA5Q8WWZ7 1642 aa32.75■■■□□ 2.83
ZIC4-209ENST00000473123 GAPVD1Q14C86 1478 aa32.74■■■□□ 2.83
ZIC4-209ENST00000473123 PBRM1Q86U86 1689 aa32.72■■■□□ 2.83
ZIC4-209ENST00000473123 GRIN2BQ13224 1484 aa32.71■■■□□ 2.83
ZIC4-209ENST00000473123 SNAPC4Q5SXM2 1469 aa32.71■■■□□ 2.83
ZIC4-209ENST00000473123 CHD1O14646 1710 aa32.64■■■□□ 2.82
ZIC4-209ENST00000473123 MAGI1Q96QZ7 1491 aaPredicted RBP32.61■■■□□ 2.81
ZIC4-209ENST00000473123 FBLN2P98095 1184 aa32.61■■■□□ 2.81
ZIC4-209ENST00000473123 OSCARQ8IYS5 282 aa32.61■■■□□ 2.81
ZIC4-209ENST00000473123 SYNJ2O15056 1496 aa32.49■■■□□ 2.79
ZIC4-209ENST00000473123 CHMP7Q8WUX9 453 aaPredicted RBP32.48■■■□□ 2.79
ZIC4-209ENST00000473123 ERICH3Q5RHP9 1530 aa32.46■■■□□ 2.79
ZIC4-209ENST00000473123 ADAMTS12P58397 1594 aa32.45■■■□□ 2.79
ZIC4-209ENST00000473123 TRIM41Q8WV44 630 aa32.42■■■□□ 2.78
ZIC4-209ENST00000473123 KIF27Q86VH2 1401 aa32.42■■■□□ 2.78
ZIC4-209ENST00000473123 FHAD1B1AJZ9 1412 aa32.34■■■□□ 2.77
ZIC4-209ENST00000473123 GRIN2AQ12879 1464 aa32.32■■■□□ 2.76
ZIC4-209ENST00000473123 IGF1RP08069 1367 aa32.25■■■□□ 2.75
ZIC4-209ENST00000473123 CLASP1Q7Z460 1538 aa32.24■■■□□ 2.75
ZIC4-209ENST00000473123 RUSC2Q8N2Y8 1516 aa32.22■■■□□ 2.75
ZIC4-209ENST00000473123 CUL7Q14999 1698 aa32.21■■■□□ 2.75
ZIC4-209ENST00000473123 CEP170Q5SW79 1584 aa32.17■■■□□ 2.74
ZIC4-209ENST00000473123 RIMBP3CA6NJZ7 1639 aa32.16■■■□□ 2.74
ZIC4-209ENST00000473123 RIMBP3BA6NNM3 1639 aa32.16■■■□□ 2.74
ZIC4-209ENST00000473123 RIMBP3Q9UFD9 1639 aa32.16■■■□□ 2.74
ZIC4-209ENST00000473123 ARHGEF11O15085 1522 aa32.15■■■□□ 2.74
ZIC4-209ENST00000473123 NUP160Q12769 1436 aa32.13■■■□□ 2.73
ZIC4-209ENST00000473123 CARMIL1Q5VZK9 1371 aa32.09■■■□□ 2.73
ZIC4-209ENST00000473123 CHIC1Q5VXU3 224 aa32.08■■■□□ 2.73
ZIC4-209ENST00000473123 RAPGEF2Q9Y4G8 1499 aa31.92■■■□□ 2.7
ZIC4-209ENST00000473123 ARAP1Q96P48 1450 aa31.9■■■□□ 2.7
ZIC4-209ENST00000473123 SHROOM2Q13796 1616 aa31.9■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms