RNA–Protein interactions for RNA: ENST00000422086.5

TUBA3FP-202, Transcript of tubulin alpha 3f pseudogene, humanhuman

TSL 1 (best) BASIC

Gene TUBA3FP, Length 1,974 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3FP-202ENST00000422086 NISCHQ9Y2I1 1504 aa42.31■■■■■ 4.36
TUBA3FP-202ENST00000422086 CCDC180Q9P1Z9 1646 aa36.85■■■■□ 3.49
TUBA3FP-202ENST00000422086 ZCCHC6Q5VYS8 1495 aaKnown RBP35.66■■■■□ 3.3
TUBA3FP-202ENST00000422086 DCAF1Q9Y4B6 1507 aa35.1■■■■□ 3.21
TUBA3FP-202ENST00000422086 SHROOM4Q9ULL8 1493 aa34.62■■■■□ 3.13
TUBA3FP-202ENST00000422086 DCAF8L2P0C7V8 631 aa34.58■■■■□ 3.13
TUBA3FP-202ENST00000422086 MYO15BQ96JP2 1530 aa34.54■■■■□ 3.12
TUBA3FP-202ENST00000422086 ABCC9O60706 1549 aa34.22■■■■□ 3.07
TUBA3FP-202ENST00000422086 NACADO15069 1562 aa34.16■■■■□ 3.06
TUBA3FP-202ENST00000422086 SCRIBQ14160 1630 aa33.79■■■■□ 3
TUBA3FP-202ENST00000422086 RB1CC1Q8TDY2 1594 aa33.76■■■□□ 2.99
TUBA3FP-202ENST00000422086 SUPT5HO00267 1087 aaKnown RBP33.52■■■□□ 2.96
TUBA3FP-202ENST00000422086 UNC13AQ9UPW8 1703 aa33.08■■■□□ 2.89
TUBA3FP-202ENST00000422086 RSF1Q96T23 1441 aaPredicted RBP32.93■■■□□ 2.86
TUBA3FP-202ENST00000422086 CECR2Q9BXF3 1484 aa32.73■■■□□ 2.83
TUBA3FP-202ENST00000422086 BAZ1AQ9NRL2 1556 aaPredicted RBP32.7■■■□□ 2.83
TUBA3FP-202ENST00000422086 MROH2BQ7Z745 1585 aa32.65■■■□□ 2.82
TUBA3FP-202ENST00000422086 BICRAQ9NZM4 1560 aa32.64■■■□□ 2.82
TUBA3FP-202ENST00000422086 SMARCA4P51532 1647 aa32.47■■■□□ 2.79
TUBA3FP-202ENST00000422086 WIZO95785 1651 aa32.43■■■□□ 2.78
TUBA3FP-202ENST00000422086 CHIC1Q5VXU3 224 aa32.36■■■□□ 2.77
TUBA3FP-202ENST00000422086 PABPN1Q86U42 306 aaKnown RBP eCLIP32.25■■■□□ 2.75
TUBA3FP-202ENST00000422086 TOP2AP11388 1531 aaKnown RBP32.18■■■□□ 2.74
TUBA3FP-202ENST00000422086 PEG3Q9GZU2 1588 aa32.1■■■□□ 2.73
TUBA3FP-202ENST00000422086 SMARCA2P51531 1590 aa31.87■■■□□ 2.69
TUBA3FP-202ENST00000422086 EIF4G1Q04637 1599 aaKnown RBP31.81■■■□□ 2.68
TUBA3FP-202ENST00000422086 ATAD2BQ9ULI0 1458 aa31.77■■■□□ 2.68
TUBA3FP-202ENST00000422086 CCDC88BA6NC98 1476 aa31.76■■■□□ 2.67
TUBA3FP-202ENST00000422086 BAZ1BQ9UIG0 1483 aaKnown RBP31.66■■■□□ 2.66
TUBA3FP-202ENST00000422086 TRIM41Q8WV44 630 aa31.57■■■□□ 2.64
TUBA3FP-202ENST00000422086 HMGXB3Q12766 1538 aa31.53■■■□□ 2.64
TUBA3FP-202ENST00000422086 NCAPD3P42695 1498 aa31.45■■■□□ 2.63
TUBA3FP-202ENST00000422086 ABCC8Q09428 1581 aa31.22■■■□□ 2.59
TUBA3FP-202ENST00000422086 CC2D2AQ9P2K1 1620 aa31.06■■■□□ 2.56
TUBA3FP-202ENST00000422086 LOC105371045A0A1W2PR82 267 aa31.03■■■□□ 2.56
TUBA3FP-202ENST00000422086 WRNQ14191 1432 aaPredicted RBP eCLIP31.02■■■□□ 2.56
TUBA3FP-202ENST00000422086 PRDM2Q13029 1718 aa30.92■■■□□ 2.54
TUBA3FP-202ENST00000422086 EEA1Q15075 1411 aa30.92■■■□□ 2.54
TUBA3FP-202ENST00000422086 FAM9AQ8IZU1 332 aaPredicted RBP30.88■■■□□ 2.53
TUBA3FP-202ENST00000422086 CFTRP13569 1480 aa30.87■■■□□ 2.53
TUBA3FP-202ENST00000422086 SYNJ1O43426 1573 aa30.87■■■□□ 2.53
TUBA3FP-202ENST00000422086 TOP2BQ02880 1626 aa30.79■■■□□ 2.52
TUBA3FP-202ENST00000422086 BIVM-ERCC5R4GMW8 1640 aa30.78■■■□□ 2.52
TUBA3FP-202ENST00000422086 SOGA1O94964 1423 aa30.68■■■□□ 2.5
TUBA3FP-202ENST00000422086 CADPSQ9ULU8 1353 aa30.64■■■□□ 2.5
TUBA3FP-202ENST00000422086 CSRNP3Q8WYN3 585 aa30.53■■■□□ 2.48
TUBA3FP-202ENST00000422086 CUX1P39880 1505 aa30.53■■■□□ 2.48
TUBA3FP-202ENST00000422086 RUSC2Q8N2Y8 1516 aa30.51■■■□□ 2.47
TUBA3FP-202ENST00000422086 KIF21BO75037 1637 aa30.48■■■□□ 2.47
TUBA3FP-202ENST00000422086 GOLGA3Q08378 1498 aa30.45■■■□□ 2.47
TUBA3FP-202ENST00000422086 CEP164Q9UPV0 1460 aa30.42■■■□□ 2.46
TUBA3FP-202ENST00000422086 TNIKQ9UKE5 1360 aa30.4■■■□□ 2.46
TUBA3FP-202ENST00000422086 LAMC3Q9Y6N6 1575 aa30.39■■■□□ 2.46
TUBA3FP-202ENST00000422086 EHMT2Q96KQ7 1210 aa30.35■■■□□ 2.45
TUBA3FP-202ENST00000422086 FANCD2Q9BXW9 1451 aa30.32■■■□□ 2.44
TUBA3FP-202ENST00000422086 CEP162Q5TB80 1403 aa30.25■■■□□ 2.43
TUBA3FP-202ENST00000422086 KIF27Q86VH2 1401 aa30.23■■■□□ 2.43
TUBA3FP-202ENST00000422086 DNMBPQ6XZF7 1577 aa30.21■■■□□ 2.43
TUBA3FP-202ENST00000422086 ERICH3Q5RHP9 1530 aa30.2■■■□□ 2.43
TUBA3FP-202ENST00000422086 UBTFP17480 764 aaKnown RBP30.15■■■□□ 2.42
TUBA3FP-202ENST00000422086 NESP48681 1621 aa30.15■■■□□ 2.42
TUBA3FP-202ENST00000422086 TRIM26Q12899 539 aaPredicted RBP30.14■■■□□ 2.42
TUBA3FP-202ENST00000422086 FGD5Q6ZNL6 1462 aa30.13■■■□□ 2.41
TUBA3FP-202ENST00000422086 PCGF6Q9BYE7 350 aa30.13■■■□□ 2.41
TUBA3FP-202ENST00000422086 PRXQ9BXM0 1461 aa30.11■■■□□ 2.41
TUBA3FP-202ENST00000422086 PDS5BQ9NTI5 1447 aa30.08■■■□□ 2.41
TUBA3FP-202ENST00000422086 RAPGEF2Q9Y4G8 1499 aa30.08■■■□□ 2.41
TUBA3FP-202ENST00000422086 TOPBP1Q92547 1522 aa30.06■■■□□ 2.4
TUBA3FP-202ENST00000422086 CUX2O14529 1486 aa30.01■■■□□ 2.39
TUBA3FP-202ENST00000422086 POLA1P09884 1462 aaPredicted RBP29.93■■■□□ 2.38
TUBA3FP-202ENST00000422086 KIF21AQ7Z4S6 1674 aa29.93■■■□□ 2.38
TUBA3FP-202ENST00000422086 ABCA10Q8WWZ4 1543 aa29.92■■■□□ 2.38
TUBA3FP-202ENST00000422086 CLIP1P30622 1438 aa29.92■■■□□ 2.38
TUBA3FP-202ENST00000422086 URB2Q14146 1524 aaKnown RBP29.9■■■□□ 2.38
TUBA3FP-202ENST00000422086 WDR97A6NE52 1622 aa29.85■■■□□ 2.37
TUBA3FP-202ENST00000422086 DNAJC5BQ9UF47 199 aa29.84■■■□□ 2.37
TUBA3FP-202ENST00000422086 IGF1RP08069 1367 aa29.82■■■□□ 2.36
TUBA3FP-202ENST00000422086 CUL7Q14999 1698 aa29.75■■■□□ 2.35
TUBA3FP-202ENST00000422086 RAD54L2Q9Y4B4 1467 aa29.75■■■□□ 2.35
TUBA3FP-202ENST00000422086 VPS8Q8N3P4 1428 aa29.75■■■□□ 2.35
TUBA3FP-202ENST00000422086 CARMIL1Q5VZK9 1371 aa29.72■■■□□ 2.35
TUBA3FP-202ENST00000422086 HRCP23327 699 aa29.7■■■□□ 2.34
TUBA3FP-202ENST00000422086 MRC2Q9UBG0 1479 aa29.68■■■□□ 2.34
TUBA3FP-202ENST00000422086 ABCA5Q8WWZ7 1642 aa29.68■■■□□ 2.34
TUBA3FP-202ENST00000422086 TARBP1Q13395 1621 aaKnown RBP29.59■■■□□ 2.33
TUBA3FP-202ENST00000422086 ARAP1Q96P48 1450 aa29.57■■■□□ 2.32
TUBA3FP-202ENST00000422086 WDR62O43379 1518 aa29.53■■■□□ 2.32
TUBA3FP-202ENST00000422086 GAPVD1Q14C86 1478 aa29.53■■■□□ 2.32
TUBA3FP-202ENST00000422086 PPARGC1BQ86YN6 1023 aaKnown RBP29.49■■■□□ 2.31
TUBA3FP-202ENST00000422086 CTTNBP2Q8WZ74 1663 aa29.48■■■□□ 2.31
TUBA3FP-202ENST00000422086 ARHGAP35Q9NRY4 1499 aa29.48■■■□□ 2.31
TUBA3FP-202ENST00000422086 APLP2Q06481 763 aa29.44■■■□□ 2.3
TUBA3FP-202ENST00000422086 PBRM1Q86U86 1689 aa29.43■■■□□ 2.3
TUBA3FP-202ENST00000422086 TDRD9Q8NDG6 1382 aaKnown RBP29.4■■■□□ 2.3
TUBA3FP-202ENST00000422086 RANGAP1P46060 587 aaPredicted RBP29.4■■■□□ 2.3
TUBA3FP-202ENST00000422086 IFT140Q96RY7 1462 aa29.39■■■□□ 2.3
TUBA3FP-202ENST00000422086 EFCAB5A4FU69 1503 aa29.38■■■□□ 2.29
TUBA3FP-202ENST00000422086 ERCC6Q03468 1493 aa29.38■■■□□ 2.29
TUBA3FP-202ENST00000422086 THOC2Q8NI27 1593 aaKnown RBP29.33■■■□□ 2.29
TUBA3FP-202ENST00000422086 ZEB1P37275 1124 aaPredicted RBP29.26■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms