Protein–RNA interactions for Protein: P53999

SUB1, Activated RNA polymerase II transcriptional coactivator p15, humanhuman

Known RBP eCLIP

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P53999 RPL8-205ENST00000527914 551 ntTSL 3 BASIC11.41□□□□□ -0.581e-21■■□□□ 12
SUB1P53999 RPL8-211ENST00000531975 698 ntTSL 38.99□□□□□ -0.971e-21■■□□□ 12
SUB1P53999 RPL8-208ENST00000529163 556 ntTSL 28.43□□□□□ -1.061e-21■■□□□ 12
SUB1P53999 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.414e-15■■□□□ 12
SUB1P53999 RPS13-208ENST00000531908 746 ntTSL 23.42□□□□□ -1.862e-6■■□□□ 12
SUB1P53999 RPS13-207ENST00000531008 594 ntTSL 23.32□□□□□ -1.882e-6■■□□□ 12
SUB1P53999 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC16.19■□□□□ 0.182e-12■■□□□ 12
SUB1P53999 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.54e-8■■□□□ 12
SUB1P53999 UQCRB-205ENST00000518876 3968 ntTSL 1 (best)5.27□□□□□ -1.574e-8■■□□□ 12
SUB1P53999 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC4.27□□□□□ -1.734e-8■■□□□ 12
SUB1P53999 UQCRB-207ENST00000521036 982 ntTSL 24.09□□□□□ -1.754e-8■■□□□ 12
SUB1P53999 UQCRB-203ENST00000517603 1041 ntTSL 1 (best)3.25□□□□□ -1.894e-8■■□□□ 12
SUB1P53999 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.46□□□□□ -2.024e-8■■□□□ 12
SUB1P53999 CANX-208ENST00000504579 533 ntTSL 417.1■□□□□ 0.333e-8■■□□□ 12
SUB1P53999 CANX-212ENST00000506654 592 ntTSL 317.1■□□□□ 0.333e-8■■□□□ 12
SUB1P53999 CANX-218ENST00000514032 1876 ntTSL 216.58■□□□□ 0.243e-8■■□□□ 12
SUB1P53999 CANX-219ENST00000514383 585 ntTSL 312.89□□□□□ -0.353e-8■■□□□ 12
SUB1P53999 CANX-204ENST00000502498 570 ntTSL 412.65□□□□□ -0.383e-8■■□□□ 12
SUB1P53999 CANX-203ENST00000502296 825 ntTSL 411.52□□□□□ -0.573e-8■■□□□ 12
SUB1P53999 CANX-216ENST00000510810 511 ntTSL 411.05□□□□□ -0.643e-8■■□□□ 12
SUB1P53999 CANX-209ENST00000504734 2232 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.793e-8■■□□□ 12
SUB1P53999 CANX-205ENST00000502673 1000 ntTSL 58.38□□□□□ -1.073e-8■■□□□ 12
SUB1P53999 PFKL-205ENST00000466134 5986 ntTSL 218.47■□□□□ 0.554e-7■■□□□ 11.9
SUB1P53999 PFKL-207ENST00000474114 6007 ntTSL 1 (best)16.79■□□□□ 0.284e-7■■□□□ 11.9
SUB1P53999 PFKL-206ENST00000467315 1947 ntTSL 215.45■□□□□ 0.064e-7■■□□□ 11.9
SUB1P53999 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.184e-7■■□□□ 11.9
SUB1P53999 PFKL-211ENST00000498841 3122 ntTSL 1 (best)13.26□□□□□ -0.294e-7■■□□□ 11.9
SUB1P53999 PFKL-202ENST00000397961 3390 ntTSL 1 (best)11.92□□□□□ -0.54e-7■■□□□ 11.9
SUB1P53999 PFKL-204ENST00000460521 2818 ntTSL 211.49□□□□□ -0.574e-7■■□□□ 11.9
SUB1P53999 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.312e-7■■□□□ 11.9
SUB1P53999 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.572e-7■■□□□ 11.9
SUB1P53999 FURIN-201ENST00000268171 4244 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.682e-7■■□□□ 11.9
SUB1P53999 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.095e-6■■□□□ 11.9
SUB1P53999 HCFC1-202ENST00000369984 8375 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.575e-6■■□□□ 11.9
SUB1P53999 PCLAF-208ENST00000560234 690 ntTSL 27.53□□□□□ -1.29e-8■■□□□ 11.9
SUB1P53999 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.839e-8■■□□□ 11.9
SUB1P53999 RPL9-209ENST00000511075 1028 ntTSL 23.98□□□□□ -1.775e-9■■□□□ 11.9
SUB1P53999 RPL9-202ENST00000437992 579 ntTSL 43.3□□□□□ -1.885e-9■■□□□ 11.9
SUB1P53999 RPS13-203ENST00000525828 664 ntTSL 212.66□□□□□ -0.389e-7■■□□□ 11.9
SUB1P53999 RPS13-204ENST00000526895 561 ntTSL 310.71□□□□□ -0.699e-7■■□□□ 11.9
SUB1P53999 RPS13-209ENST00000533969 355 ntTSL 310.21□□□□□ -0.779e-7■■□□□ 11.9
SUB1P53999 RPS13-201ENST00000228140 491 ntTSL 2 BASIC7.82□□□□□ -1.169e-7■■□□□ 11.9
SUB1P53999 RPS13-202ENST00000525634 646 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.349e-7■■□□□ 11.9
SUB1P53999 IMPDH2-202ENST00000429182 1469 ntTSL 59.81□□□□□ -0.844e-8■■□□□ 11.9
SUB1P53999 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.984e-6■■□□□ 11.9
SUB1P53999 ACACA-238ENST00000616352 1626 ntTSL 1 (best)17.95■□□□□ 0.468e-8■■□□□ 11.9
SUB1P53999 ACACA-239ENST00000617548 1063 ntTSL 1 (best)17.38■□□□□ 0.378e-8■■□□□ 11.9
SUB1P53999 MAN2C1-230ENST00000566099 1316 ntTSL 517■□□□□ 0.318e-8■■□□□ 11.9
SUB1P53999 MAN2C1-235ENST00000567163 1356 ntTSL 516.99■□□□□ 0.318e-8■■□□□ 11.9
SUB1P53999 ASAH1-219ENST00000636033 1940 ntTSL 516.76■□□□□ 0.274e-6■■□□□ 11.9
SUB1P53999 ACACA-236ENST00000615229 1468 ntTSL 1 (best)16.62■□□□□ 0.258e-8■■□□□ 11.9
SUB1P53999 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.234e-6■■□□□ 11.9
SUB1P53999 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.224e-6■■□□□ 11.9
SUB1P53999 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC16.38■□□□□ 0.214e-6■■□□□ 11.9
SUB1P53999 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.28■□□□□ 0.24e-6■■□□□ 11.9
SUB1P53999 MAN2C1-219ENST00000564570 803 ntTSL 516.27■□□□□ 0.28e-8■■□□□ 11.9
SUB1P53999 ARFRP1-211ENST00000618568 1612 ntTSL 316.23■□□□□ 0.194e-6■■□□□ 11.9
SUB1P53999 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC15.84■□□□□ 0.138e-8■■□□□ 11.9
SUB1P53999 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC15.52■□□□□ 0.074e-6■■□□□ 11.9
SUB1P53999 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC14.93□□□□□ -0.024e-6■■□□□ 11.9
SUB1P53999 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.064e-6■■□□□ 11.9
SUB1P53999 ASAH1-216ENST00000635944 1960 ntTSL 514.59□□□□□ -0.074e-6■■□□□ 11.9
SUB1P53999 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC14.36□□□□□ -0.114e-6■■□□□ 11.9
SUB1P53999 ASAH1-217ENST00000635998 1845 ntTSL 514□□□□□ -0.174e-6■■□□□ 11.9
SUB1P53999 POLG-209ENST00000530715 372 ntTSL 313.92□□□□□ -0.184e-6■■□□□ 11.9
SUB1P53999 MAN2C1-204ENST00000561693 1152 ntTSL 513.78□□□□□ -0.28e-8■■□□□ 11.9
SUB1P53999 ASAH1-239ENST00000636920 1989 ntTSL 513.78□□□□□ -0.24e-6■■□□□ 11.9
SUB1P53999 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.224e-6■■□□□ 11.9
SUB1P53999 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.224e-6■■□□□ 11.9
SUB1P53999 ASAH1-233ENST00000636701 2158 ntTSL 513.55□□□□□ -0.244e-6■■□□□ 11.9
SUB1P53999 ARFRP1-205ENST00000610414 1251 ntTSL 213.45□□□□□ -0.264e-6■■□□□ 11.9
SUB1P53999 ARFRP1-206ENST00000610774 5178 ntTSL 213.33□□□□□ -0.284e-6■■□□□ 11.9
SUB1P53999 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC13.33□□□□□ -0.284e-6■■□□□ 11.9
SUB1P53999 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC13.07□□□□□ -0.324e-6■■□□□ 11.9
SUB1P53999 ASAH1-236ENST00000636815 1724 ntTSL 513.07□□□□□ -0.324e-6■■□□□ 11.9
SUB1P53999 ARFRP1-209ENST00000612772 1375 ntTSL 313.02□□□□□ -0.334e-6■■□□□ 11.9
SUB1P53999 ASAH1-243ENST00000637095 2048 ntTSL 512.98□□□□□ -0.334e-6■■□□□ 11.9
SUB1P53999 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.344e-6■■□□□ 11.9
SUB1P53999 ARFRP1-203ENST00000609188 225 ntTSL 512.9□□□□□ -0.344e-6■■□□□ 11.9
SUB1P53999 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.354e-6■■□□□ 11.9
SUB1P53999 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC12.7□□□□□ -0.384e-6■■□□□ 11.9
SUB1P53999 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC12.67□□□□□ -0.384e-6■■□□□ 11.9
SUB1P53999 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC12.63□□□□□ -0.394e-6■■□□□ 11.9
SUB1P53999 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC12.53□□□□□ -0.44e-6■■□□□ 11.9
SUB1P53999 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.434e-6■■□□□ 11.9
SUB1P53999 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.444e-6■■□□□ 11.9
SUB1P53999 ASAH1-222ENST00000636160 2328 ntTSL 512.28□□□□□ -0.444e-6■■□□□ 11.9
SUB1P53999 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC12.26□□□□□ -0.454e-6■■□□□ 11.9
SUB1P53999 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.454e-6■■□□□ 11.9
SUB1P53999 NARS-207ENST00000587675 1002 ntTSL 211.97□□□□□ -0.494e-6■■□□□ 11.9
SUB1P53999 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC11.96□□□□□ -0.54e-6■■□□□ 11.9
SUB1P53999 ASAH1-228ENST00000636494 1975 ntTSL 511.87□□□□□ -0.514e-6■■□□□ 11.9
SUB1P53999 ASAH1-241ENST00000637013 2649 ntTSL 511.87□□□□□ -0.514e-6■■□□□ 11.9
SUB1P53999 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.524e-6■■□□□ 11.9
SUB1P53999 ASAH1-247ENST00000637429 2558 ntTSL 511.68□□□□□ -0.544e-6■■□□□ 11.9
SUB1P53999 MAN2C1-233ENST00000566569 848 ntTSL 511.63□□□□□ -0.558e-8■■□□□ 11.9
SUB1P53999 ASAH1-245ENST00000637244 3151 ntTSL 1 (best)11.63□□□□□ -0.554e-6■■□□□ 11.9
SUB1P53999 POLG-213ENST00000631044 4668 ntTSL 511.58□□□□□ -0.564e-6■■□□□ 11.9
SUB1P53999 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.574e-6■■□□□ 11.9
SUB1P53999 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.584e-6■■□□□ 11.9
Retrieved 100 of 11,644 protein–RNA pairs in 293.8 ms