RNA–Protein interactions for RNA: ENST00000504734.5

CANX-209, Transcript of calnexin, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CANX, Length 2,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CANX-209ENST00000504734 NISCHQ9Y2I1 1504 aa25.98■■□□□ 1.75
CANX-209ENST00000504734 CCDC180Q9P1Z9 1646 aa23.18■■□□□ 1.3
CANX-209ENST00000504734 ABCC9O60706 1549 aa22.47■■□□□ 1.19
CANX-209ENST00000504734 NACADO15069 1562 aa21.75■■□□□ 1.07
CANX-209ENST00000504734 RB1CC1Q8TDY2 1594 aa21.73■■□□□ 1.07
CANX-209ENST00000504734 MYO15BQ96JP2 1530 aa21.73■■□□□ 1.07
CANX-209ENST00000504734 ZCCHC6Q5VYS8 1495 aaKnown RBP21.66■■□□□ 1.06
CANX-209ENST00000504734 DCAF1Q9Y4B6 1507 aa21.61■■□□□ 1.05
CANX-209ENST00000504734 SHROOM4Q9ULL8 1493 aa21.54■■□□□ 1.04
CANX-209ENST00000504734 DCAF8L2P0C7V8 631 aa21.33■■□□□ 1.01
CANX-209ENST00000504734 UNC13AQ9UPW8 1703 aa21.28■■□□□ 1
CANX-209ENST00000504734 SUPT5HO00267 1087 aaKnown RBP21.28■■□□□ 1
CANX-209ENST00000504734 BICRAQ9NZM4 1560 aa21.14■□□□□ 0.98
CANX-209ENST00000504734 SCRIBQ14160 1630 aa20.97■□□□□ 0.95
CANX-209ENST00000504734 PABPN1Q86U42 306 aaKnown RBP eCLIP20.92■□□□□ 0.94
CANX-209ENST00000504734 CHIC1Q5VXU3 224 aa20.89■□□□□ 0.93
CANX-209ENST00000504734 HRCP23327 699 aa20.73■□□□□ 0.91
CANX-209ENST00000504734 DNAJC5BQ9UF47 199 aa20.67■□□□□ 0.9
CANX-209ENST00000504734 EIF4G1Q04637 1599 aaKnown RBP20.52■□□□□ 0.88
CANX-209ENST00000504734 PCGF6Q9BYE7 350 aa20.46■□□□□ 0.87
CANX-209ENST00000504734 CC2D2AQ9P2K1 1620 aa20.42■□□□□ 0.86
CANX-209ENST00000504734 CECR2Q9BXF3 1484 aa20.24■□□□□ 0.83
CANX-209ENST00000504734 LOC105371045A0A1W2PR82 267 aa20.19■□□□□ 0.82
CANX-209ENST00000504734 SMARCA4P51532 1647 aa20.16■□□□□ 0.82
CANX-209ENST00000504734 BAZ1AQ9NRL2 1556 aaPredicted RBP20.12■□□□□ 0.81
CANX-209ENST00000504734 TRIM26Q12899 539 aaPredicted RBP20.12■□□□□ 0.81
CANX-209ENST00000504734 PPARGC1BQ86YN6 1023 aaKnown RBP20.1■□□□□ 0.81
CANX-209ENST00000504734 NCAPD3P42695 1498 aa20.08■□□□□ 0.8
CANX-209ENST00000504734 PEG3Q9GZU2 1588 aa20.06■□□□□ 0.8
CANX-209ENST00000504734 RSF1Q96T23 1441 aaPredicted RBP20.05■□□□□ 0.8
CANX-209ENST00000504734 ATAD2BQ9ULI0 1458 aa20.04■□□□□ 0.8
CANX-209ENST00000504734 SMARCA2P51531 1590 aa20.02■□□□□ 0.8
CANX-209ENST00000504734 HMGXB3Q12766 1538 aa19.99■□□□□ 0.79
CANX-209ENST00000504734 MROH2BQ7Z745 1585 aa19.98■□□□□ 0.79
CANX-209ENST00000504734 ZEB1P37275 1124 aaPredicted RBP19.88■□□□□ 0.77
CANX-209ENST00000504734 TRIM41Q8WV44 630 aa19.87■□□□□ 0.77
CANX-209ENST00000504734 BAZ1BQ9UIG0 1483 aaKnown RBP19.81■□□□□ 0.76
CANX-209ENST00000504734 WIZO95785 1651 aa19.74■□□□□ 0.75
CANX-209ENST00000504734 FAM9AQ8IZU1 332 aaPredicted RBP19.61■□□□□ 0.73
CANX-209ENST00000504734 TOP2AP11388 1531 aaKnown RBP19.59■□□□□ 0.73
CANX-209ENST00000504734 LAMC3Q9Y6N6 1575 aa19.53■□□□□ 0.72
CANX-209ENST00000504734 NESP48681 1621 aa19.48■□□□□ 0.71
CANX-209ENST00000504734 CADPSQ9ULU8 1353 aa19.42■□□□□ 0.7
CANX-209ENST00000504734 EHMT2Q96KQ7 1210 aa19.36■□□□□ 0.69
CANX-209ENST00000504734 CFTRP13569 1480 aa19.35■□□□□ 0.69
CANX-209ENST00000504734 PELP1Q8IZL8 1130 aaKnown RBP19.34■□□□□ 0.69
CANX-209ENST00000504734 ERCC6Q03468 1493 aa19.34■□□□□ 0.69
CANX-209ENST00000504734 PDS5BQ9NTI5 1447 aa19.32■□□□□ 0.68
CANX-209ENST00000504734 CCDC88BA6NC98 1476 aa19.31■□□□□ 0.68
CANX-209ENST00000504734 CUX2O14529 1486 aa19.31■□□□□ 0.68
CANX-209ENST00000504734 THOC2Q8NI27 1593 aaKnown RBP19.31■□□□□ 0.68
CANX-209ENST00000504734 KIF21AQ7Z4S6 1674 aa19.3■□□□□ 0.68
CANX-209ENST00000504734 PRDM2Q13029 1718 aa19.25■□□□□ 0.67
CANX-209ENST00000504734 WRNQ14191 1432 aaPredicted RBP eCLIP19.23■□□□□ 0.67
CANX-209ENST00000504734 SCAF1Q9H7N4 1312 aaKnown RBP19.21■□□□□ 0.67
CANX-209ENST00000504734 CCER1Q8TC90 406 aaPredicted RBP19.18■□□□□ 0.66
CANX-209ENST00000504734 FANCD2Q9BXW9 1451 aa19.17■□□□□ 0.66
CANX-209ENST00000504734 MRC2Q9UBG0 1479 aa19.16■□□□□ 0.66
CANX-209ENST00000504734 WDR62O43379 1518 aa19.15■□□□□ 0.66
CANX-209ENST00000504734 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.15■□□□□ 0.66
CANX-209ENST00000504734 CEP164Q9UPV0 1460 aa19.14■□□□□ 0.66
CANX-209ENST00000504734 ABCC8Q09428 1581 aa19.14■□□□□ 0.66
CANX-209ENST00000504734 EEA1Q15075 1411 aa19.12■□□□□ 0.65
CANX-209ENST00000504734 CEP162Q5TB80 1403 aa19.1■□□□□ 0.65
CANX-209ENST00000504734 TNIKQ9UKE5 1360 aa19.09■□□□□ 0.65
CANX-209ENST00000504734 URB2Q14146 1524 aaKnown RBP19.02■□□□□ 0.64
CANX-209ENST00000504734 ACIN1Q9UKV3 1341 aaKnown RBP19■□□□□ 0.63
CANX-209ENST00000504734 SOGA1O94964 1423 aa19■□□□□ 0.63
CANX-209ENST00000504734 CSRNP3Q8WYN3 585 aa18.97■□□□□ 0.63
CANX-209ENST00000504734 DIEXFQ68CQ4 756 aaKnown RBP18.97■□□□□ 0.63
CANX-209ENST00000504734 GOLGA3Q08378 1498 aa18.94■□□□□ 0.62
CANX-209ENST00000504734 CENPBP07199 599 aaPredicted RBP18.92■□□□□ 0.62
CANX-209ENST00000504734 DNMBPQ6XZF7 1577 aa18.9■□□□□ 0.62
CANX-209ENST00000504734 TOPBP1Q92547 1522 aa18.9■□□□□ 0.62
CANX-209ENST00000504734 NEUROD1Q13562 356 aa18.89■□□□□ 0.61
CANX-209ENST00000504734 UBTFP17480 764 aaKnown RBP18.88■□□□□ 0.61
CANX-209ENST00000504734 RUSC2Q8N2Y8 1516 aa18.88■□□□□ 0.61
CANX-209ENST00000504734 TTBK1Q5TCY1 1321 aaPredicted RBP18.83■□□□□ 0.61
CANX-209ENST00000504734 KIF21BO75037 1637 aa18.83■□□□□ 0.6
CANX-209ENST00000504734 IFT140Q96RY7 1462 aa18.79■□□□□ 0.6
CANX-209ENST00000504734 ZNF316A6NFI3 1004 aaPredicted RBP18.78■□□□□ 0.6
CANX-209ENST00000504734 TARBP1Q13395 1621 aaKnown RBP18.75■□□□□ 0.59
CANX-209ENST00000504734 CUX1P39880 1505 aa18.75■□□□□ 0.59
CANX-209ENST00000504734 GTF3C3Q9Y5Q9 886 aa18.74■□□□□ 0.59
CANX-209ENST00000504734 SYNJ1O43426 1573 aa18.74■□□□□ 0.59
CANX-209ENST00000504734 POLA1P09884 1462 aaPredicted RBP18.73■□□□□ 0.59
CANX-209ENST00000504734 CLIP1P30622 1438 aa18.69■□□□□ 0.58
CANX-209ENST00000504734 VPS8Q8N3P4 1428 aa18.68■□□□□ 0.58
CANX-209ENST00000504734 WDR97A6NE52 1622 aa18.66■□□□□ 0.58
CANX-209ENST00000504734 FGD5Q6ZNL6 1462 aa18.66■□□□□ 0.58
CANX-209ENST00000504734 ZNF608Q9ULD9 1512 aaPredicted RBP18.66■□□□□ 0.58
CANX-209ENST00000504734 DNAJC5Q9H3Z4 198 aa18.65■□□□□ 0.58
CANX-209ENST00000504734 BIVM-ERCC5R4GMW8 1640 aa18.65■□□□□ 0.58
CANX-209ENST00000504734 EIF4G3O43432 1585 aaKnown RBP18.63■□□□□ 0.57
CANX-209ENST00000504734 TOP2BQ02880 1626 aa18.62■□□□□ 0.57
CANX-209ENST00000504734 RAD54L2Q9Y4B4 1467 aa18.59■□□□□ 0.57
CANX-209ENST00000504734 APLP2Q06481 763 aa18.58■□□□□ 0.56
CANX-209ENST00000504734 HNRNPUL2Q1KMD3 747 aaKnown RBP18.58■□□□□ 0.56
CANX-209ENST00000504734 RAPGEF2Q9Y4G8 1499 aa18.56■□□□□ 0.56
CANX-209ENST00000504734 ABCA10Q8WWZ4 1543 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms