RNA–Protein interactions for RNA: ENST00000616352.4

ACACA-238, Transcript of acetyl-CoA carboxylase alpha, humanhuman

TSL 1 (best)

Gene ACACA, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACACA-238ENST00000616352 NISCHQ9Y2I1 1504 aa54.47■■■■■ 6.31
ACACA-238ENST00000616352 CCDC180Q9P1Z9 1646 aa48.1■■■■■ 5.29
ACACA-238ENST00000616352 ABCC9O60706 1549 aa46.09■■■■■ 4.97
ACACA-238ENST00000616352 ZCCHC6Q5VYS8 1495 aaKnown RBP45.58■■■■■ 4.89
ACACA-238ENST00000616352 DCAF1Q9Y4B6 1507 aa45.13■■■■■ 4.81
ACACA-238ENST00000616352 DCAF8L2P0C7V8 631 aa44.98■■■■■ 4.79
ACACA-238ENST00000616352 MYO15BQ96JP2 1530 aa44.97■■■■■ 4.79
ACACA-238ENST00000616352 NACADO15069 1562 aa44.94■■■■■ 4.78
ACACA-238ENST00000616352 RB1CC1Q8TDY2 1594 aa44.77■■■■■ 4.76
ACACA-238ENST00000616352 UNC13AQ9UPW8 1703 aa43.96■■■■■ 4.63
ACACA-238ENST00000616352 SCRIBQ14160 1630 aa43.92■■■■■ 4.62
ACACA-238ENST00000616352 SHROOM4Q9ULL8 1493 aa43.49■■■■■ 4.55
ACACA-238ENST00000616352 BICRAQ9NZM4 1560 aa43.45■■■■■ 4.55
ACACA-238ENST00000616352 PABPN1Q86U42 306 aaKnown RBP eCLIP43.17■■■■■ 4.59e-8■■□□□ 11.5
ACACA-238ENST00000616352 CECR2Q9BXF3 1484 aa42.32■■■■■ 4.37
ACACA-238ENST00000616352 EIF4G1Q04637 1599 aaKnown RBP42.19■■■■■ 4.34
ACACA-238ENST00000616352 BAZ1AQ9NRL2 1556 aaPredicted RBP42.15■■■■■ 4.34
ACACA-238ENST00000616352 SMARCA4P51532 1647 aa42.11■■■■■ 4.33
ACACA-238ENST00000616352 MROH2BQ7Z745 1585 aa42■■■■■ 4.31
ACACA-238ENST00000616352 RSF1Q96T23 1441 aaPredicted RBP41.81■■■■■ 4.28
ACACA-238ENST00000616352 CC2D2AQ9P2K1 1620 aa41.8■■■■■ 4.28
ACACA-238ENST00000616352 PEG3Q9GZU2 1588 aa41.7■■■■■ 4.27
ACACA-238ENST00000616352 WIZO95785 1651 aa41.64■■■■■ 4.26
ACACA-238ENST00000616352 SMARCA2P51531 1590 aa41.6■■■■■ 4.25
ACACA-238ENST00000616352 ATAD2BQ9ULI0 1458 aa41.59■■■■■ 4.25
ACACA-238ENST00000616352 DNAJC5BQ9UF47 199 aa41.48■■■■■ 4.23
ACACA-238ENST00000616352 NCAPD3P42695 1498 aa41.43■■■■■ 4.22
ACACA-238ENST00000616352 HMGXB3Q12766 1538 aa41.35■■■■■ 4.21
ACACA-238ENST00000616352 SUPT5HO00267 1087 aaKnown RBP41.33■■■■■ 4.21
ACACA-238ENST00000616352 BAZ1BQ9UIG0 1483 aaKnown RBP41.29■■■■■ 4.2
ACACA-238ENST00000616352 TOP2AP11388 1531 aaKnown RBP41.2■■■■■ 4.19
ACACA-238ENST00000616352 CCDC88BA6NC98 1476 aa40.69■■■■■ 4.1
ACACA-238ENST00000616352 CADPSQ9ULU8 1353 aa40.24■■■■■ 4.03
ACACA-238ENST00000616352 CFTRP13569 1480 aa40.23■■■■■ 4.03
ACACA-238ENST00000616352 LAMC3Q9Y6N6 1575 aa40.23■■■■■ 4.03
ACACA-238ENST00000616352 NESP48681 1621 aa40.19■■■■■ 4.02
ACACA-238ENST00000616352 PRDM2Q13029 1718 aa40.18■■■■■ 4.02
ACACA-238ENST00000616352 PDS5BQ9NTI5 1447 aa39.85■■■■□ 3.97
ACACA-238ENST00000616352 KIF21AQ7Z4S6 1674 aa39.84■■■■□ 3.97
ACACA-238ENST00000616352 FANCD2Q9BXW9 1451 aa39.8■■■■□ 3.96
ACACA-238ENST00000616352 CEP164Q9UPV0 1460 aa39.66■■■■□ 3.94
ACACA-238ENST00000616352 ERCC6Q03468 1493 aa39.62■■■■□ 3.93
ACACA-238ENST00000616352 ABCC8Q09428 1581 aa39.52■■■■□ 3.92
ACACA-238ENST00000616352 THOC2Q8NI27 1593 aaKnown RBP39.44■■■■□ 3.9
ACACA-238ENST00000616352 MRC2Q9UBG0 1479 aa39.43■■■■□ 3.9
ACACA-238ENST00000616352 URB2Q14146 1524 aaKnown RBP39.38■■■■□ 3.89
ACACA-238ENST00000616352 WRNQ14191 1432 aaPredicted RBP eCLIP39.38■■■■□ 3.89
ACACA-238ENST00000616352 CUX1P39880 1505 aa39.35■■■■□ 3.89
ACACA-238ENST00000616352 DNMBPQ6XZF7 1577 aa39.34■■■■□ 3.89
ACACA-238ENST00000616352 SYNJ1O43426 1573 aa39.32■■■■□ 3.88
ACACA-238ENST00000616352 WDR62O43379 1518 aa39.31■■■■□ 3.88
ACACA-238ENST00000616352 BIVM-ERCC5R4GMW8 1640 aa39.3■■■■□ 3.88
ACACA-238ENST00000616352 TOPBP1Q92547 1522 aa39.29■■■■□ 3.88
ACACA-238ENST00000616352 TOP2BQ02880 1626 aa39.27■■■■□ 3.88
ACACA-238ENST00000616352 CHIC1Q5VXU3 224 aa39.14■■■■□ 3.86
ACACA-238ENST00000616352 FGD5Q6ZNL6 1462 aa39.05■■■■□ 3.84
ACACA-238ENST00000616352 POLA1P09884 1462 aaPredicted RBP39.02■■■■□ 3.84
ACACA-238ENST00000616352 TRIM41Q8WV44 630 aa38.99■■■■□ 3.83
ACACA-238ENST00000616352 CUX2O14529 1486 aa38.93■■■■□ 3.82
ACACA-238ENST00000616352 TARBP1Q13395 1621 aaKnown RBP38.86■■■■□ 3.81
ACACA-238ENST00000616352 RAD54L2Q9Y4B4 1467 aa38.82■■■■□ 3.81
ACACA-238ENST00000616352 SOGA1O94964 1423 aa38.81■■■■□ 3.8
ACACA-238ENST00000616352 WDR97A6NE52 1622 aa38.81■■■■□ 3.8
ACACA-238ENST00000616352 IFT140Q96RY7 1462 aa38.79■■■■□ 3.8
ACACA-238ENST00000616352 ABCA10Q8WWZ4 1543 aa38.72■■■■□ 3.79
ACACA-238ENST00000616352 ZNF608Q9ULD9 1512 aaPredicted RBP38.57■■■■□ 3.76
ACACA-238ENST00000616352 ABCA5Q8WWZ7 1642 aa38.55■■■■□ 3.76
ACACA-238ENST00000616352 EIF4G3O43432 1585 aaKnown RBP38.51■■■■□ 3.76
ACACA-238ENST00000616352 TDRD9Q8NDG6 1382 aaKnown RBP38.48■■■■□ 3.75
ACACA-238ENST00000616352 KIF27Q86VH2 1401 aa38.46■■■■□ 3.75
ACACA-238ENST00000616352 RUSC2Q8N2Y8 1516 aa38.45■■■■□ 3.75
ACACA-238ENST00000616352 AQRO60306 1485 aaKnown RBP eCLIP38.44■■■■□ 3.745e-6■■■■■ 28
ACACA-238ENST00000616352 GAPVD1Q14C86 1478 aa38.41■■■■□ 3.74
ACACA-238ENST00000616352 PBRM1Q86U86 1689 aa38.4■■■■□ 3.74
ACACA-238ENST00000616352 EEA1Q15075 1411 aa38.33■■■■□ 3.73
ACACA-238ENST00000616352 ERICH3Q5RHP9 1530 aa38.28■■■■□ 3.72
ACACA-238ENST00000616352 GRIN2BQ13224 1484 aa38.28■■■■□ 3.72
ACACA-238ENST00000616352 IGF1RP08069 1367 aa38.2■■■■□ 3.71
ACACA-238ENST00000616352 FAM9AQ8IZU1 332 aaPredicted RBP38.16■■■■□ 3.7
ACACA-238ENST00000616352 CUL7Q14999 1698 aa38.15■■■■□ 3.7
ACACA-238ENST00000616352 SNAPC4Q5SXM2 1469 aa38.12■■■■□ 3.69
ACACA-238ENST00000616352 CSRNP3Q8WYN3 585 aa38.11■■■■□ 3.69
ACACA-238ENST00000616352 MAGI1Q96QZ7 1491 aaPredicted RBP38.1■■■■□ 3.69
ACACA-238ENST00000616352 ADAMTS12P58397 1594 aa38.09■■■■□ 3.69
ACACA-238ENST00000616352 PRXQ9BXM0 1461 aa38■■■■□ 3.67
ACACA-238ENST00000616352 FHAD1B1AJZ9 1412 aa37.99■■■■□ 3.67
ACACA-238ENST00000616352 CARMIL1Q5VZK9 1371 aa37.99■■■■□ 3.67
ACACA-238ENST00000616352 KIF21BO75037 1637 aa37.95■■■■□ 3.67
ACACA-238ENST00000616352 SYNJ2O15056 1496 aa37.93■■■■□ 3.66
ACACA-238ENST00000616352 CHD1O14646 1710 aa37.91■■■■□ 3.66
ACACA-238ENST00000616352 RAPGEF2Q9Y4G8 1499 aa37.88■■■■□ 3.65
ACACA-238ENST00000616352 GRIN2AQ12879 1464 aa37.81■■■■□ 3.64
ACACA-238ENST00000616352 CHMP7Q8WUX9 453 aaPredicted RBP37.76■■■■□ 3.64
ACACA-238ENST00000616352 GOLGA3Q08378 1498 aa37.72■■■■□ 3.63
ACACA-238ENST00000616352 FBLN2P98095 1184 aa37.71■■■■□ 3.63
ACACA-238ENST00000616352 CEP170Q5SW79 1584 aa37.63■■■■□ 3.62
ACACA-238ENST00000616352 CTTNBP2Q8WZ74 1663 aa37.62■■■■□ 3.61
ACACA-238ENST00000616352 NUP160Q12769 1436 aa37.61■■■■□ 3.61
ACACA-238ENST00000616352 EHMT2Q96KQ7 1210 aa37.58■■■■□ 3.61
ACACA-238ENST00000616352 LOC105371045A0A1W2PR82 267 aa37.53■■■■□ 3.6
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms