Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
SFTPBP07988 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
SFTPBP07988 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
SFTPBP07988 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.41■□□□□ 0.22
SFTPBP07988 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SFTPBP07988 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
SFTPBP07988 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SFTPBP07988 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.41■□□□□ 0.22
SFTPBP07988 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.41■□□□□ 0.22
SFTPBP07988 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.41■□□□□ 0.22
SFTPBP07988 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SFTPBP07988 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.41■□□□□ 0.22
SFTPBP07988 AL121829.2-201ENST00000620908 328 ntBASIC16.41■□□□□ 0.22
SFTPBP07988 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SFTPBP07988 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SFTPBP07988 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SFTPBP07988 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SFTPBP07988 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SFTPBP07988 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SFTPBP07988 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.41■□□□□ 0.22
SFTPBP07988 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SFTPBP07988 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.41■□□□□ 0.22
SFTPBP07988 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SFTPBP07988 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC16.41■□□□□ 0.22
SFTPBP07988 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SFTPBP07988 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SFTPBP07988 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SFTPBP07988 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SFTPBP07988 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.4■□□□□ 0.22
SFTPBP07988 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SFTPBP07988 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SFTPBP07988 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SFTPBP07988 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SFTPBP07988 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
SFTPBP07988 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.4■□□□□ 0.22
SFTPBP07988 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SFTPBP07988 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SFTPBP07988 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SFTPBP07988 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SFTPBP07988 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SFTPBP07988 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SFTPBP07988 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.4■□□□□ 0.22
SFTPBP07988 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SFTPBP07988 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SFTPBP07988 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SFTPBP07988 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SFTPBP07988 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.4■□□□□ 0.22
SFTPBP07988 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.4■□□□□ 0.22
SFTPBP07988 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
SFTPBP07988 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.4■□□□□ 0.22
SFTPBP07988 KRT18P16-201ENST00000510337 1294 ntBASIC16.4■□□□□ 0.22
SFTPBP07988 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC16.4■□□□□ 0.22
SFTPBP07988 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.4■□□□□ 0.22
SFTPBP07988 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SFTPBP07988 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
SFTPBP07988 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.4■□□□□ 0.22
SFTPBP07988 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
SFTPBP07988 MTDHP1-201ENST00000605323 784 ntBASIC16.4■□□□□ 0.22
SFTPBP07988 AL023875.1-201ENST00000640777 796 ntBASIC16.4■□□□□ 0.22
SFTPBP07988 AP006294.2-201ENST00000641667 209 ntBASIC16.4■□□□□ 0.22
SFTPBP07988 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SFTPBP07988 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SFTPBP07988 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
SFTPBP07988 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SFTPBP07988 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SFTPBP07988 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SFTPBP07988 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SFTPBP07988 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SFTPBP07988 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SFTPBP07988 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SFTPBP07988 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SFTPBP07988 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SFTPBP07988 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
SFTPBP07988 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
SFTPBP07988 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.22
SFTPBP07988 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SFTPBP07988 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SFTPBP07988 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.39■□□□□ 0.21
SFTPBP07988 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SFTPBP07988 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.39■□□□□ 0.21
SFTPBP07988 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SFTPBP07988 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.39■□□□□ 0.21
SFTPBP07988 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SFTPBP07988 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SFTPBP07988 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.39■□□□□ 0.21
SFTPBP07988 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.39■□□□□ 0.21
SFTPBP07988 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SFTPBP07988 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SFTPBP07988 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
SFTPBP07988 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC16.39■□□□□ 0.21
SFTPBP07988 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.39■□□□□ 0.21
SFTPBP07988 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.39■□□□□ 0.21
SFTPBP07988 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SFTPBP07988 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.39■□□□□ 0.21
SFTPBP07988 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
SFTPBP07988 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
SFTPBP07988 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SFTPBP07988 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
SFTPBP07988 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.39■□□□□ 0.21
SFTPBP07988 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms